RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 CGNL1Q0VF96 1302 aa28.62■■■□□ 2.17
SDCBP-209ENST00000522243 PDGFDQ9GZP0 370 aaPredicted RBP28.61■■■□□ 2.17
SDCBP-209ENST00000522243 STK32BQ9NY57 414 aa28.61■■■□□ 2.17
SDCBP-209ENST00000522243 KIF24Q5T7B8 1368 aa28.61■■■□□ 2.17
SDCBP-209ENST00000522243 MAP2P11137 1827 aaKnown RBP28.6■■■□□ 2.17
SDCBP-209ENST00000522243 SYTL4Q96C24 671 aaPredicted RBP28.6■■■□□ 2.17
SDCBP-209ENST00000522243 SPON1Q9HCB6 807 aa28.6■■■□□ 2.17
SDCBP-209ENST00000522243 DOT1LQ8TEK3 1739 aa28.6■■■□□ 2.17
SDCBP-209ENST00000522243 CASZ1Q86V15 1759 aa28.6■■■□□ 2.17
SDCBP-209ENST00000522243 RAPGEF4Q8WZA2 1011 aa28.59■■■□□ 2.17
SDCBP-209ENST00000522243 SLC15A2Q16348 729 aa28.58■■■□□ 2.17
SDCBP-209ENST00000522243 TATP17735 454 aaPredicted RBP28.57■■■□□ 2.16
SDCBP-209ENST00000522243 PRIM1P49642 420 aaKnown RBP28.57■■■□□ 2.16
SDCBP-209ENST00000522243 PANK3Q9H999 370 aa28.56■■■□□ 2.16
SDCBP-209ENST00000522243 ANKRD26Q9UPS8 1709 aa28.55■■■□□ 2.16
SDCBP-209ENST00000522243 TNNT2P45379 298 aaPredicted RBP28.55■■■□□ 2.16
SDCBP-209ENST00000522243 PPP1R1BQ9UD71 204 aaPredicted RBP28.54■■■□□ 2.16
SDCBP-209ENST00000522243 ZBTB7AO95365 584 aa28.53■■■□□ 2.16
SDCBP-209ENST00000522243 PAPPAQ13219 1627 aa28.52■■■□□ 2.16
SDCBP-209ENST00000522243 LRRC4BQ9NT99 713 aa28.52■■■□□ 2.16
SDCBP-209ENST00000522243 POLKQ9UBT6 870 aa28.52■■■□□ 2.16
SDCBP-209ENST00000522243 WASHC2AQ641Q2 1341 aa28.51■■■□□ 2.15
SDCBP-209ENST00000522243 NSD2O96028 1365 aa28.5■■■□□ 2.15
SDCBP-209ENST00000522243 ATF5Q9Y2D1 282 aaPredicted RBP28.49■■■□□ 2.15
SDCBP-209ENST00000522243 KCNQ4P56696 695 aa28.48■■■□□ 2.15
SDCBP-209ENST00000522243 ZNF827Q17R98 1081 aa28.47■■■□□ 2.15
SDCBP-209ENST00000522243 PCDH11XQ9BZA7 1347 aa28.46■■■□□ 2.15
SDCBP-209ENST00000522243 PCDH11YQ9BZA8 1340 aa28.46■■■□□ 2.15
SDCBP-209ENST00000522243 EYA1Q99502 592 aa28.46■■■□□ 2.15
SDCBP-209ENST00000522243 LY75O60449 1722 aa28.45■■■□□ 2.14
SDCBP-209ENST00000522243 CYP27B1O15528 508 aa28.44■■■□□ 2.14
SDCBP-209ENST00000522243 SLC27A3Q5K4L6 730 aa28.44■■■□□ 2.14
SDCBP-209ENST00000522243 PKD1L3Q7Z443 1732 aa28.43■■■□□ 2.14
SDCBP-209ENST00000522243 NCAPD2Q15021 1401 aa28.43■■■□□ 2.14
SDCBP-209ENST00000522243 PTGER2P43116 358 aa28.42■■■□□ 2.14
SDCBP-209ENST00000522243 EIF4A2Q14240 407 aaKnown RBP28.41■■■□□ 2.14
SDCBP-209ENST00000522243 AKT1S1Q96B36 256 aa28.4■■■□□ 2.14
SDCBP-209ENST00000522243 MTFR1LQ9H019 292 aa28.39■■■□□ 2.14
SDCBP-209ENST00000522243 TOGARAM1Q9Y4F4 1720 aa28.39■■■□□ 2.14
SDCBP-209ENST00000522243 MPRIPQ6WCQ1 1025 aa28.38■■■□□ 2.13
SDCBP-209ENST00000522243 MORC1Q86VD1 984 aa28.38■■■□□ 2.13
SDCBP-209ENST00000522243 CCNL1Q9UK58 526 aaPredicted RBP28.38■■■□□ 2.13
SDCBP-209ENST00000522243 KIF7Q2M1P5 1343 aa28.38■■■□□ 2.13
SDCBP-209ENST00000522243 ITGB4P16144 1822 aa28.37■■■□□ 2.13
SDCBP-209ENST00000522243 SPG7Q9UQ90 795 aa28.37■■■□□ 2.13
SDCBP-209ENST00000522243 KNSTRNQ9Y448 316 aa28.37■■■□□ 2.13
SDCBP-209ENST00000522243 TUBGCP6Q96RT7 1819 aa28.36■■■□□ 2.13
SDCBP-209ENST00000522243 QSER1Q2KHR3 1735 aa28.35■■■□□ 2.13
SDCBP-209ENST00000522243 TFCP2L1Q9NZI6 479 aa28.34■■■□□ 2.13
SDCBP-209ENST00000522243 SGIP1Q9BQI5 828 aa28.32■■■□□ 2.12
SDCBP-209ENST00000522243 PNPLA7Q6ZV29 1317 aa28.32■■■□□ 2.12
SDCBP-209ENST00000522243 PALLDQ8WX93 1383 aa28.3■■■□□ 2.12
SDCBP-209ENST00000522243 NKX1-1Q15270 411 aaPredicted RBP28.3■■■□□ 2.12
SDCBP-209ENST00000522243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.3■■■□□ 2.12
SDCBP-209ENST00000522243 IGSF1Q8N6C5 1336 aa28.29■■■□□ 2.12
SDCBP-209ENST00000522243 AMER1Q5JTC6 1135 aaPredicted RBP28.28■■■□□ 2.12
SDCBP-209ENST00000522243 PIGBQ92521 554 aa28.28■■■□□ 2.12
SDCBP-209ENST00000522243 FHDC1Q9C0D6 1143 aaPredicted RBP28.28■■■□□ 2.12
SDCBP-209ENST00000522243 C5P01031 1676 aa28.27■■■□□ 2.12
SDCBP-209ENST00000522243 PHKG2P15735 406 aa28.27■■■□□ 2.12
SDCBP-209ENST00000522243 IFNL2Q8IZJ0 200 aa28.27■■■□□ 2.12
SDCBP-209ENST00000522243 ARXQ96QS3 562 aa28.26■■■□□ 2.11
SDCBP-209ENST00000522243 TAF1LQ8IZX4 1826 aa28.25■■■□□ 2.11
SDCBP-209ENST00000522243 DCAF8L1A6NGE4 600 aa28.25■■■□□ 2.11
SDCBP-209ENST00000522243 SLC16A10Q8TF71 515 aa28.25■■■□□ 2.11
SDCBP-209ENST00000522243 SYT17Q9BSW7 474 aa28.25■■■□□ 2.11
SDCBP-209ENST00000522243 SMARCC1Q92922 1105 aaPredicted RBP28.24■■■□□ 2.11
SDCBP-209ENST00000522243 MSH5O43196 834 aa28.23■■■□□ 2.11
SDCBP-209ENST00000522243 AEBP1Q8IUX7 1158 aa28.22■■■□□ 2.11
SDCBP-209ENST00000522243 TMOD3Q9NYL9 352 aa28.22■■■□□ 2.11
SDCBP-209ENST00000522243 COL23A1Q86Y22 540 aaPredicted RBP28.21■■■□□ 2.11
SDCBP-209ENST00000522243 PER1O15534 1290 aaPredicted RBP28.2■■■□□ 2.1
SDCBP-209ENST00000522243 CC2D1BQ5T0F9 858 aaKnown RBP28.2■■■□□ 2.1
SDCBP-209ENST00000522243 COL24A1Q17RW2 1714 aa28.19■■■□□ 2.1
SDCBP-209ENST00000522243 POLD1P28340 1107 aa28.19■■■□□ 2.1
SDCBP-209ENST00000522243 PLEKHO1Q53GL0 409 aaPredicted RBP28.19■■■□□ 2.1
SDCBP-209ENST00000522243 CNGB1Q14028 1251 aaPredicted RBP28.18■■■□□ 2.1
SDCBP-209ENST00000522243 KLHL34Q8N239 644 aa28.18■■■□□ 2.1
SDCBP-209ENST00000522243 ASAP1Q9ULH1 1129 aa28.18■■■□□ 2.1
SDCBP-209ENST00000522243 C4BP0C0L5 1744 aa28.18■■■□□ 2.1
SDCBP-209ENST00000522243 IL13P35225 146 aa28.17■■■□□ 2.1
SDCBP-209ENST00000522243 SULT6B1Q6IMI4 303 aa28.17■■■□□ 2.1
SDCBP-209ENST00000522243 MTHFSP49914 203 aa28.16■■■□□ 2.1
SDCBP-209ENST00000522243 ZNF530Q6P9A1 599 aaPredicted RBP28.16■■■□□ 2.1
SDCBP-209ENST00000522243 PLEKHG2Q9H7P9 1386 aa28.15■■■□□ 2.1
SDCBP-209ENST00000522243 LOC102724428A0A0B4J2F2 783 aa28.15■■■□□ 2.1
SDCBP-209ENST00000522243 SIK1P57059 783 aa28.15■■■□□ 2.1
SDCBP-209ENST00000522243 YY1P25490 414 aa28.14■■■□□ 2.1
SDCBP-209ENST00000522243 AMOTQ4VCS5 1084 aa28.13■■■□□ 2.09
SDCBP-209ENST00000522243 MSL1Q68DK7 614 aa28.13■■■□□ 2.09
SDCBP-209ENST00000522243 SMIM5Q71RC9 77 aa28.13■■■□□ 2.09
SDCBP-209ENST00000522243 AK7Q96M32 723 aa28.13■■■□□ 2.09
SDCBP-209ENST00000522243 ATG3Q9NT62 314 aa28.13■■■□□ 2.09
SDCBP-209ENST00000522243 HSP90AB1P08238 724 aaKnown RBP28.12■■■□□ 2.09
SDCBP-209ENST00000522243 HMGB2P26583 209 aaKnown RBP28.12■■■□□ 2.09
SDCBP-209ENST00000522243 LINC00116Q8NCU8 138 aa28.12■■■□□ 2.09
SDCBP-209ENST00000522243 DCAF5Q96JK2 942 aa28.12■■■□□ 2.09
SDCBP-209ENST00000522243 AMIGO3Q86WK7 504 aa28.11■■■□□ 2.09
SDCBP-209ENST00000522243 KDM6AO15550 1401 aaPredicted RBP28.1■■■□□ 2.09
SDCBP-209ENST00000522243 ERVV-2B6SEH9 535 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms