RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 PANK3Q9H999 370 aa9.02□□□□□ -0.97
CTNNA1-228ENST00000521640 DLC1Q96QB1 1528 aa9.01□□□□□ -0.97
CTNNA1-228ENST00000521640 GOLGA8CPA6NN73 597 aa9.01□□□□□ -0.97
CTNNA1-228ENST00000521640 BLMP54132 1417 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-228ENST00000521640 CFAP65Q6ZU64 1925 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-228ENST00000521640 MYO5BQ9ULV0 1848 aa9.01□□□□□ -0.97
CTNNA1-228ENST00000521640 IDI1Q13907 227 aa9□□□□□ -0.97
CTNNA1-228ENST00000521640 FAM9BQ8IZU0 186 aa9□□□□□ -0.97
CTNNA1-228ENST00000521640 BCAMP50895 628 aa8.99□□□□□ -0.97
CTNNA1-228ENST00000521640 PDE3BQ13370 1112 aa8.99□□□□□ -0.97
CTNNA1-228ENST00000521640 THSD4Q6ZMP0 1018 aa8.99□□□□□ -0.97
CTNNA1-228ENST00000521640 KNSTRNQ9Y448 316 aa8.99□□□□□ -0.97
CTNNA1-228ENST00000521640 A2ML1A8K2U0 1454 aa8.99□□□□□ -0.97
CTNNA1-228ENST00000521640 SETD1AO15047 1707 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-228ENST00000521640 NSD2O96028 1365 aa8.98□□□□□ -0.97
CTNNA1-228ENST00000521640 ALKQ9UM73 1620 aa8.98□□□□□ -0.97
CTNNA1-228ENST00000521640 PTPRMP28827 1452 aa8.97□□□□□ -0.97
CTNNA1-228ENST00000521640 TULP4Q9NRJ4 1543 aa8.97□□□□□ -0.97
CTNNA1-228ENST00000521640 ANKK1Q8NFD2 765 aa8.97□□□□□ -0.97
CTNNA1-228ENST00000521640 ZC3H15Q8WU90 426 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-228ENST00000521640 KNDC1Q76NI1 1749 aa8.97□□□□□ -0.97
CTNNA1-228ENST00000521640 SOWAHBA6NEL2 793 aa8.96□□□□□ -0.98
CTNNA1-228ENST00000521640 PTPN5P54829 565 aa8.96□□□□□ -0.98
CTNNA1-228ENST00000521640 SAMD7Q7Z3H4 446 aa8.96□□□□□ -0.98
CTNNA1-228ENST00000521640 PXYLP1Q8TE99 480 aa8.96□□□□□ -0.98
CTNNA1-228ENST00000521640 PHOX2BQ99453 314 aa8.96□□□□□ -0.98
CTNNA1-228ENST00000521640 NUDCQ9Y266 331 aa8.96□□□□□ -0.98
CTNNA1-228ENST00000521640 RNF123Q5XPI4 1314 aa8.96□□□□□ -0.98
CTNNA1-228ENST00000521640 EVC2Q86UK5 1308 aa8.96□□□□□ -0.98
CTNNA1-228ENST00000521640 NLRP1Q9C000 1473 aa8.96□□□□□ -0.98
CTNNA1-228ENST00000521640 METTL3Q86U44 580 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-228ENST00000521640 NGEFQ8N5V2 710 aa8.95□□□□□ -0.98
CTNNA1-228ENST00000521640 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.95□□□□□ -0.98
CTNNA1-228ENST00000521640 RBM46Q8TBY0 533 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-228ENST00000521640 ATAD2Q6PL18 1390 aa8.95□□□□□ -0.98
CTNNA1-228ENST00000521640 ANKRD36BQ8N2N9 1353 aa8.95□□□□□ -0.98
CTNNA1-228ENST00000521640 YTHDC2Q9H6S0 1430 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-228ENST00000521640 MED14O60244 1454 aa8.95□□□□□ -0.98
CTNNA1-228ENST00000521640 RCCD1A6NED2 376 aa8.94□□□□□ -0.98
CTNNA1-228ENST00000521640 ZMYND10O75800 440 aa8.94□□□□□ -0.98
CTNNA1-228ENST00000521640 PPP2R1AP30153 589 aa8.94□□□□□ -0.98
CTNNA1-228ENST00000521640 NLRP7Q8WX94 980 aa8.94□□□□□ -0.98
CTNNA1-228ENST00000521640 LRCH3Q96II8 777 aa8.94□□□□□ -0.98
CTNNA1-228ENST00000521640 RIMS2Q9UQ26 1411 aa8.94□□□□□ -0.98
CTNNA1-228ENST00000521640 HDGFP51858 240 aaKnown RBP8.93□□□□□ -0.98
CTNNA1-228ENST00000521640 MAP2K5Q13163 448 aa8.93□□□□□ -0.98
CTNNA1-228ENST00000521640 SWT1Q5T5J6 900 aaKnown RBP8.93□□□□□ -0.98
CTNNA1-228ENST00000521640 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.93□□□□□ -0.98
CTNNA1-228ENST00000521640 HCSTQ9UBK5 93 aa8.93□□□□□ -0.98
CTNNA1-228ENST00000521640 POLR3AO14802 1390 aaPredicted RBP8.93□□□□□ -0.98
CTNNA1-228ENST00000521640 ZMYM3Q14202 1370 aa8.93□□□□□ -0.98
CTNNA1-228ENST00000521640 TECPR2O15040 1411 aa8.93□□□□□ -0.98
CTNNA1-228ENST00000521640 NRXN3Q9Y4C0 1643 aa8.93□□□□□ -0.98
CTNNA1-228ENST00000521640 UBR1Q8IWV7 1749 aa8.93□□□□□ -0.98
CTNNA1-228ENST00000521640 ANKRD26Q9UPS8 1709 aa8.93□□□□□ -0.98
CTNNA1-228ENST00000521640 CPS1P31327 1500 aa8.92□□□□□ -0.98
CTNNA1-228ENST00000521640 TNRQ92752 1358 aa8.92□□□□□ -0.98
CTNNA1-228ENST00000521640 ABCC11Q96J66 1382 aa8.92□□□□□ -0.98
CTNNA1-228ENST00000521640 IRF6O14896 467 aa8.92□□□□□ -0.98
CTNNA1-228ENST00000521640 OATP04181 439 aa8.92□□□□□ -0.98
CTNNA1-228ENST00000521640 CC2D1BQ5T0F9 858 aaKnown RBP8.92□□□□□ -0.98
CTNNA1-228ENST00000521640 SIRT1Q96EB6 747 aa8.92□□□□□ -0.98
CTNNA1-228ENST00000521640 TRAK1Q9UPV9 953 aa8.92□□□□□ -0.98
CTNNA1-228ENST00000521640 FAM135BQ49AJ0 1406 aa8.91□□□□□ -0.98
CTNNA1-228ENST00000521640 CGNL1Q0VF96 1302 aa8.91□□□□□ -0.98
CTNNA1-228ENST00000521640 DNAJB2P25686 324 aa8.91□□□□□ -0.98
CTNNA1-228ENST00000521640 ESF1Q9H501 851 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-228ENST00000521640 TMEM134Q9H6X4 195 aa8.91□□□□□ -0.98
CTNNA1-228ENST00000521640 WBP1LQ9NX94 342 aa8.91□□□□□ -0.98
CTNNA1-228ENST00000521640 HPS5Q9UPZ3 1129 aa8.91□□□□□ -0.98
CTNNA1-228ENST00000521640 ATP7BP35670 1465 aa8.9□□□□□ -0.98
CTNNA1-228ENST00000521640 NSD3Q9BZ95 1437 aa8.9□□□□□ -0.98
CTNNA1-228ENST00000521640 FBXO31Q5XUX0 539 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-228ENST00000521640 BARGINQ6ZT62 677 aa8.9□□□□□ -0.98
CTNNA1-228ENST00000521640 CCDC102AQ96A19 550 aa8.9□□□□□ -0.98
CTNNA1-228ENST00000521640 MINK1Q8N4C8 1332 aaPredicted RBP8.89□□□□□ -0.99
CTNNA1-228ENST00000521640 TMEM132EQ6IEE7 984 aa8.89□□□□□ -0.99
CTNNA1-228ENST00000521640 CARD14Q9BXL6 1004 aa8.89□□□□□ -0.99
CTNNA1-228ENST00000521640 TSR3Q9UJK0 312 aaKnown RBP8.89□□□□□ -0.99
CTNNA1-228ENST00000521640 ADGRB2O60241 1585 aa8.89□□□□□ -0.99
CTNNA1-228ENST00000521640 DIP2AQ14689 1571 aa8.89□□□□□ -0.99
CTNNA1-228ENST00000521640 SLIT1O75093 1534 aa8.89□□□□□ -0.99
CTNNA1-228ENST00000521640 TMEM2Q9UHN6 1383 aa8.88□□□□□ -0.99
CTNNA1-228ENST00000521640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.88□□□□□ -0.99
CTNNA1-228ENST00000521640 RNF40O75150 1001 aa8.88□□□□□ -0.99
CTNNA1-228ENST00000521640 WDR43Q15061 677 aaKnown RBP eCLIP8.88□□□□□ -0.99
CTNNA1-228ENST00000521640 PPP4R2Q9NY27 417 aa8.88□□□□□ -0.99
CTNNA1-228ENST00000521640 FER1L4A9Z1Z3 1794 aa8.88□□□□□ -0.99
CTNNA1-228ENST00000521640 ARHGAP23Q9P227 1491 aa8.88□□□□□ -0.99
CTNNA1-228ENST00000521640 C3P01024 1663 aa8.88□□□□□ -0.99
CTNNA1-228ENST00000521640 SHPRHQ149N8 1683 aa8.88□□□□□ -0.99
CTNNA1-228ENST00000521640 PLEKHG1Q9ULL1 1385 aa8.86□□□□□ -0.99
CTNNA1-228ENST00000521640 ZNF521Q96K83 1311 aa8.86□□□□□ -0.99
CTNNA1-228ENST00000521640 CD163L1Q9NR16 1453 aa8.86□□□□□ -0.99
CTNNA1-228ENST00000521640 TERF2IPQ9NYB0 399 aa8.86□□□□□ -0.99
CTNNA1-228ENST00000521640 KIF20BQ96Q89 1820 aa8.86□□□□□ -0.99
CTNNA1-228ENST00000521640 PPP4CP60510 307 aa8.85□□□□□ -0.99
CTNNA1-228ENST00000521640 KRI1Q8N9T8 703 aaKnown RBP8.85□□□□□ -0.99
CTNNA1-228ENST00000521640 CDC42BPGQ6DT37 1551 aa8.85□□□□□ -0.99
CTNNA1-228ENST00000521640 A0A1W2PP64 1363 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms