RNA–Protein interactions for RNA: ENST00000521597.1

TNFRSF11B-203, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 2

Gene TNFRSF11B, Length 849 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-203ENST00000521597 DOLKQ9UPQ8 538 aa8.52□□□□□ -1.05
TNFRSF11B-203ENST00000521597 PROSER2Q86WR7 435 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF11B-203ENST00000521597 A6NJR5 290 aa8.5□□□□□ -1.05
TNFRSF11B-203ENST00000521597 PIK3CDO00329 1044 aa8.5□□□□□ -1.05
TNFRSF11B-203ENST00000521597 CYP2U1Q7Z449 544 aa8.5□□□□□ -1.05
TNFRSF11B-203ENST00000521597 TERTO14746 1132 aaKnown RBP8.49□□□□□ -1.05
TNFRSF11B-203ENST00000521597 NFX1Q12986 1120 aaKnown RBP8.49□□□□□ -1.05
TNFRSF11B-203ENST00000521597 LCE2AQ5TA79 106 aaPredicted RBP8.49□□□□□ -1.05
TNFRSF11B-203ENST00000521597 FOXD4L5Q5VV16 416 aaPredicted RBP8.49□□□□□ -1.05
TNFRSF11B-203ENST00000521597 PLPP7Q8NBV4 271 aa8.49□□□□□ -1.05
TNFRSF11B-203ENST00000521597 RNF217Q8TC41 542 aa8.49□□□□□ -1.05
TNFRSF11B-203ENST00000521597 POLMQ9NP87 494 aaPredicted RBP8.49□□□□□ -1.05
TNFRSF11B-203ENST00000521597 FIGNL2A6NMB9 653 aa8.48□□□□□ -1.05
TNFRSF11B-203ENST00000521597 MYCP01106 439 aaPredicted RBP8.48□□□□□ -1.05
TNFRSF11B-203ENST00000521597 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.48□□□□□ -1.05
TNFRSF11B-203ENST00000521597 MAP7D1Q3KQU3 841 aa8.48□□□□□ -1.05
TNFRSF11B-203ENST00000521597 TREML4Q6UXN2 200 aa8.48□□□□□ -1.05
TNFRSF11B-203ENST00000521597 NXF1Q9UBU9 619 aaKnown RBP8.48□□□□□ -1.05
TNFRSF11B-203ENST00000521597 A0A1W2PRU2 124 aa8.47□□□□□ -1.05
TNFRSF11B-203ENST00000521597 OXLD1Q5BKU9 147 aa8.47□□□□□ -1.05
TNFRSF11B-203ENST00000521597 RNF144AP50876 292 aaPredicted RBP8.46□□□□□ -1.06
TNFRSF11B-203ENST00000521597 USP4Q13107 963 aa8.46□□□□□ -1.06
TNFRSF11B-203ENST00000521597 CLN3Q13286 438 aa8.46□□□□□ -1.06
TNFRSF11B-203ENST00000521597 LCE2CQ5TA81 110 aa8.46□□□□□ -1.06
TNFRSF11B-203ENST00000521597 HDGFL1Q5TGJ6 251 aa8.46□□□□□ -1.06
TNFRSF11B-203ENST00000521597 NPAS3Q8IXF0 933 aa8.46□□□□□ -1.06
TNFRSF11B-203ENST00000521597 NFATC2IPQ8NCF5 419 aa8.46□□□□□ -1.06
TNFRSF11B-203ENST00000521597 ESF1Q9H501 851 aaKnown RBP8.46□□□□□ -1.06
TNFRSF11B-203ENST00000521597 ARHGEF10LQ9HCE6 1279 aa8.46□□□□□ -1.06
TNFRSF11B-203ENST00000521597 MEN1O00255 615 aa8.45□□□□□ -1.06
TNFRSF11B-203ENST00000521597 WFS1O76024 890 aa8.45□□□□□ -1.06
TNFRSF11B-203ENST00000521597 GNRH1P01148 92 aa8.45□□□□□ -1.06
TNFRSF11B-203ENST00000521597 UCN2Q96RP3 112 aa8.45□□□□□ -1.06
TNFRSF11B-203ENST00000521597 RAB6BQ9NRW1 208 aa8.45□□□□□ -1.06
TNFRSF11B-203ENST00000521597 H3BM21 787 aa8.44□□□□□ -1.06
TNFRSF11B-203ENST00000521597 SKIP12755 728 aa8.44□□□□□ -1.06
TNFRSF11B-203ENST00000521597 GPC1P35052 558 aa8.44□□□□□ -1.06
TNFRSF11B-203ENST00000521597 VEGFBP49765 207 aa8.44□□□□□ -1.06
TNFRSF11B-203ENST00000521597 IL2RAP01589 272 aa8.43□□□□□ -1.06
TNFRSF11B-203ENST00000521597 PTSQ03393 145 aa8.43□□□□□ -1.06
TNFRSF11B-203ENST00000521597 GLMNQ92990 594 aa8.43□□□□□ -1.06
TNFRSF11B-203ENST00000521597 SIRT1Q96EB6 747 aa8.43□□□□□ -1.06
TNFRSF11B-203ENST00000521597 PPFIA3O75145 1194 aa8.42□□□□□ -1.06
TNFRSF11B-203ENST00000521597 LYSMD3Q7Z3D4 306 aa8.42□□□□□ -1.06
TNFRSF11B-203ENST00000521597 NLRP3Q96P20 1036 aa8.42□□□□□ -1.06
TNFRSF11B-203ENST00000521597 HRH3Q9Y5N1 445 aa8.42□□□□□ -1.06
TNFRSF11B-203ENST00000521597 SLC35F4A4IF30 521 aa8.41□□□□□ -1.06
TNFRSF11B-203ENST00000521597 USP17L5A8MUK1 530 aa8.41□□□□□ -1.06
TNFRSF11B-203ENST00000521597 STAU1O95793 577 aaKnown RBP8.41□□□□□ -1.06
TNFRSF11B-203ENST00000521597 TBC1D9Q6ZT07 1266 aa8.41□□□□□ -1.06
TNFRSF11B-203ENST00000521597 CNKSR1Q969H4 720 aa8.41□□□□□ -1.06
TNFRSF11B-203ENST00000521597 ESYT1Q9BSJ8 1104 aa8.41□□□□□ -1.06
TNFRSF11B-203ENST00000521597 GTF3C3Q9Y5Q9 886 aa8.41□□□□□ -1.06
TNFRSF11B-203ENST00000521597 SENP3-EIF4A1A0A087X0R7 540 aa8.4□□□□□ -1.06
TNFRSF11B-203ENST00000521597 LZTS3O60299 673 aaPredicted RBP8.4□□□□□ -1.06
TNFRSF11B-203ENST00000521597 SCNN1DP51172 638 aa8.4□□□□□ -1.06
TNFRSF11B-203ENST00000521597 NCOA4Q13772 614 aa8.4□□□□□ -1.06
TNFRSF11B-203ENST00000521597 EML3Q32P44 896 aa8.4□□□□□ -1.06
TNFRSF11B-203ENST00000521597 SLC16A10Q8TF71 515 aa8.4□□□□□ -1.06
TNFRSF11B-203ENST00000521597 XAGE2Q96GT9 111 aa8.4□□□□□ -1.06
TNFRSF11B-203ENST00000521597 GRIP2Q9C0E4 1043 aa8.4□□□□□ -1.06
TNFRSF11B-203ENST00000521597 ETNK1Q9HBU6 452 aa8.4□□□□□ -1.06
TNFRSF11B-203ENST00000521597 ERBB4Q15303 1308 aa8.39□□□□□ -1.07
TNFRSF11B-203ENST00000521597 ESCO1Q5FWF5 840 aa8.39□□□□□ -1.07
TNFRSF11B-203ENST00000521597 PRICKLE2Q7Z3G6 844 aa8.39□□□□□ -1.07
TNFRSF11B-203ENST00000521597 PLEKHM2Q8IWE5 1019 aa8.39□□□□□ -1.07
TNFRSF11B-203ENST00000521597 DEPDC4Q8N2C3 294 aa8.39□□□□□ -1.07
TNFRSF11B-203ENST00000521597 CCDC155Q8N6L0 562 aa8.39□□□□□ -1.07
TNFRSF11B-203ENST00000521597 PCDHGA11Q9Y5H2 935 aa8.39□□□□□ -1.07
TNFRSF11B-203ENST00000521597 ATP9BO43861 1147 aa8.38□□□□□ -1.07
TNFRSF11B-203ENST00000521597 VSIG8P0DPA2 414 aa8.38□□□□□ -1.07
TNFRSF11B-203ENST00000521597 CENPCQ03188 943 aa8.38□□□□□ -1.07
TNFRSF11B-203ENST00000521597 SLC27A3Q5K4L6 730 aa8.38□□□□□ -1.07
TNFRSF11B-203ENST00000521597 IRF7Q92985 503 aa8.38□□□□□ -1.07
TNFRSF11B-203ENST00000521597 FHDC1Q9C0D6 1143 aaPredicted RBP8.38□□□□□ -1.07
TNFRSF11B-203ENST00000521597 USP17L3A6NCW0 530 aa8.37□□□□□ -1.07
TNFRSF11B-203ENST00000521597 USP17L4A6NCW7 530 aa8.37□□□□□ -1.07
TNFRSF11B-203ENST00000521597 SPATA31C2B4DYI2 1134 aa8.37□□□□□ -1.07
TNFRSF11B-203ENST00000521597 WASLO00401 505 aaPredicted RBP8.37□□□□□ -1.07
TNFRSF11B-203ENST00000521597 RHOQP17081 205 aa8.37□□□□□ -1.07
TNFRSF11B-203ENST00000521597 GDF10P55107 478 aa8.37□□□□□ -1.07
TNFRSF11B-203ENST00000521597 USP17L2Q6R6M4 530 aa8.37□□□□□ -1.07
TNFRSF11B-203ENST00000521597 USP17L1Q7RTZ2 530 aa8.37□□□□□ -1.07
TNFRSF11B-203ENST00000521597 NOD1Q9Y239 953 aa8.37□□□□□ -1.07
TNFRSF11B-203ENST00000521597 TMEM229AB2RXF0 380 aa8.36□□□□□ -1.07
TNFRSF11B-203ENST00000521597 GTF2IP78347 998 aa8.36□□□□□ -1.07
TNFRSF11B-203ENST00000521597 POU4F2Q12837 409 aa8.36□□□□□ -1.07
TNFRSF11B-203ENST00000521597 CALR3Q96L12 384 aaKnown RBP8.36□□□□□ -1.07
TNFRSF11B-203ENST00000521597 WIPF1O43516 503 aa8.35□□□□□ -1.07
TNFRSF11B-203ENST00000521597 INHAP05111 366 aa8.35□□□□□ -1.07
TNFRSF11B-203ENST00000521597 ITGA6P23229 1130 aa8.35□□□□□ -1.07
TNFRSF11B-203ENST00000521597 NBPF10Q6P3W6 841 aaKnown RBP8.35□□□□□ -1.07
TNFRSF11B-203ENST00000521597 NBPF15Q8N660 670 aa8.35□□□□□ -1.07
TNFRSF11B-203ENST00000521597 GMPRP36959 345 aa8.34□□□□□ -1.07
TNFRSF11B-203ENST00000521597 TFIP11Q9UBB9 837 aaKnown RBP8.34□□□□□ -1.07
TNFRSF11B-203ENST00000521597 ZNF777Q9ULD5 760 aaPredicted RBP8.34□□□□□ -1.07
TNFRSF11B-203ENST00000521597 PALM3A6NDB9 673 aaPredicted RBP8.33□□□□□ -1.08
TNFRSF11B-203ENST00000521597 INSM1Q01101 510 aaPredicted RBP8.33□□□□□ -1.08
TNFRSF11B-203ENST00000521597 TLR1Q15399 786 aa8.33□□□□□ -1.08
TNFRSF11B-203ENST00000521597 WDR44Q5JSH3 913 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms