RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 H3BM21 787 aa6.75□□□□□ -1.33
VPS13B-209ENST00000521559 GPC1P35052 558 aa6.75□□□□□ -1.33
VPS13B-209ENST00000521559 USP4Q13107 963 aa6.75□□□□□ -1.33
VPS13B-209ENST00000521559 NLRP3Q96P20 1036 aa6.75□□□□□ -1.33
VPS13B-209ENST00000521559 CTSOP43234 321 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-209ENST00000521559 MAP7D1Q3KQU3 841 aa6.74□□□□□ -1.33
VPS13B-209ENST00000521559 LCE2AQ5TA79 106 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-209ENST00000521559 DOLKQ9UPQ8 538 aa6.74□□□□□ -1.33
VPS13B-209ENST00000521559 GNRH1P01148 92 aa6.73□□□□□ -1.33
VPS13B-209ENST00000521559 RNF144AP50876 292 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-209ENST00000521559 INSM1Q01101 510 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-209ENST00000521559 PTSQ03393 145 aa6.73□□□□□ -1.33
VPS13B-209ENST00000521559 LYSMD3Q7Z3D4 306 aa6.73□□□□□ -1.33
VPS13B-209ENST00000521559 PHTF2Q8N3S3 785 aa6.73□□□□□ -1.33
VPS13B-209ENST00000521559 RNF217Q8TC41 542 aa6.73□□□□□ -1.33
VPS13B-209ENST00000521559 A0A1W2PRU2 124 aa6.72□□□□□ -1.33
VPS13B-209ENST00000521559 MEN1O00255 615 aa6.72□□□□□ -1.33
VPS13B-209ENST00000521559 WIPF1O43516 503 aa6.72□□□□□ -1.33
VPS13B-209ENST00000521559 TRAK2O60296 914 aa6.72□□□□□ -1.33
VPS13B-209ENST00000521559 PPFIA3O75145 1194 aa6.72□□□□□ -1.33
VPS13B-209ENST00000521559 VEGFBP49765 207 aa6.72□□□□□ -1.33
VPS13B-209ENST00000521559 KDF1Q8NAX2 398 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-209ENST00000521559 CCDC85AQ96PX6 553 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-209ENST00000521559 OSBPL3Q9H4L5 887 aa6.72□□□□□ -1.33
VPS13B-209ENST00000521559 SCTRP47872 440 aa6.71□□□□□ -1.34
VPS13B-209ENST00000521559 CLN3Q13286 438 aa6.71□□□□□ -1.34
VPS13B-209ENST00000521559 ESCO1Q5FWF5 840 aa6.71□□□□□ -1.34
VPS13B-209ENST00000521559 LZTS3O60299 673 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-209ENST00000521559 SLC27A3Q5K4L6 730 aa6.7□□□□□ -1.34
VPS13B-209ENST00000521559 FOXD4L5Q5VV16 416 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-209ENST00000521559 CHIC2Q9UKJ5 165 aa6.7□□□□□ -1.34
VPS13B-209ENST00000521559 SLC35F4A4IF30 521 aa6.69□□□□□ -1.34
VPS13B-209ENST00000521559 VSIG8P0DPA2 414 aa6.69□□□□□ -1.34
VPS13B-209ENST00000521559 GTF2E1P29083 439 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-209ENST00000521559 OXLD1Q5BKU9 147 aa6.69□□□□□ -1.34
VPS13B-209ENST00000521559 CCDC155Q8N6L0 562 aa6.69□□□□□ -1.34
VPS13B-209ENST00000521559 PLPP7Q8NBV4 271 aa6.69□□□□□ -1.34
VPS13B-209ENST00000521559 POM121Q96HA1 1249 aa6.69□□□□□ -1.34
VPS13B-209ENST00000521559 CDCA7Q9BWT1 371 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-209ENST00000521559 ARHGEF10LQ9HCE6 1279 aa6.69□□□□□ -1.34
VPS13B-209ENST00000521559 PRICKLE2Q7Z3G6 844 aa6.68□□□□□ -1.34
VPS13B-209ENST00000521559 NFATC2IPQ8NCF5 419 aa6.68□□□□□ -1.34
VPS13B-209ENST00000521559 ESYT1Q9BSJ8 1104 aa6.68□□□□□ -1.34
VPS13B-209ENST00000521559 ALG2Q9H553 416 aa6.68□□□□□ -1.34
VPS13B-209ENST00000521559 GMPRP36959 345 aa6.67□□□□□ -1.34
VPS13B-209ENST00000521559 WDR44Q5JSH3 913 aa6.67□□□□□ -1.34
VPS13B-209ENST00000521559 NANOS1Q8WY41 292 aaKnown RBP6.67□□□□□ -1.34
VPS13B-209ENST00000521559 CNKSR1Q969H4 720 aa6.67□□□□□ -1.34
VPS13B-209ENST00000521559 GRIP2Q9C0E4 1043 aa6.67□□□□□ -1.34
VPS13B-209ENST00000521559 SKIP12755 728 aa6.66□□□□□ -1.34
VPS13B-209ENST00000521559 ITGA6P23229 1130 aa6.66□□□□□ -1.34
VPS13B-209ENST00000521559 EML3Q32P44 896 aa6.66□□□□□ -1.34
VPS13B-209ENST00000521559 TSGA10IPQ3SY00 556 aa6.66□□□□□ -1.34
VPS13B-209ENST00000521559 XAGE2Q96GT9 111 aa6.66□□□□□ -1.34
VPS13B-209ENST00000521559 GMCL1Q96IK5 515 aa6.66□□□□□ -1.34
VPS13B-209ENST00000521559 ERBB4Q15303 1308 aa6.66□□□□□ -1.34
VPS13B-209ENST00000521559 FAM181BA6NEQ2 426 aa6.65□□□□□ -1.34
VPS13B-209ENST00000521559 SPATA31C2B4DYI2 1134 aa6.65□□□□□ -1.34
VPS13B-209ENST00000521559 CENPCQ03188 943 aa6.65□□□□□ -1.34
VPS13B-209ENST00000521559 SV2AQ7L0J3 742 aa6.65□□□□□ -1.34
VPS13B-209ENST00000521559 PROSER2Q86WR7 435 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-209ENST00000521559 ZSCAN10Q96SZ4 725 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-209ENST00000521559 RAB6BQ9NRW1 208 aa6.65□□□□□ -1.34
VPS13B-209ENST00000521559 A6NJR5 290 aa6.64□□□□□ -1.35
VPS13B-209ENST00000521559 H7C1W4 665 aa6.64□□□□□ -1.35
VPS13B-209ENST00000521559 IL2RAP01589 272 aa6.64□□□□□ -1.35
VPS13B-209ENST00000521559 RHOQP17081 205 aa6.64□□□□□ -1.35
VPS13B-209ENST00000521559 POU4F2Q12837 409 aa6.64□□□□□ -1.35
VPS13B-209ENST00000521559 GNASQ5JWF2 1037 aa6.64□□□□□ -1.35
VPS13B-209ENST00000521559 LCE2CQ5TA81 110 aa6.64□□□□□ -1.35
VPS13B-209ENST00000521559 TAS1R3Q7RTX0 852 aa6.64□□□□□ -1.35
VPS13B-209ENST00000521559 NOD1Q9Y239 953 aa6.64□□□□□ -1.35
VPS13B-209ENST00000521559 DYRK1BQ9Y463 629 aa6.64□□□□□ -1.35
VPS13B-209ENST00000521559 SENP3-EIF4A1A0A087X0R7 540 aa6.63□□□□□ -1.35
VPS13B-209ENST00000521559 CDC14CA4D256 554 aa6.63□□□□□ -1.35
VPS13B-209ENST00000521559 WASLO00401 505 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-209ENST00000521559 HDGFL1Q5TGJ6 251 aa6.63□□□□□ -1.35
VPS13B-209ENST00000521559 TMEM214Q6NUQ4 689 aaKnown RBP6.63□□□□□ -1.35
VPS13B-209ENST00000521559 NBPF10Q6P3W6 841 aaKnown RBP6.63□□□□□ -1.35
VPS13B-209ENST00000521559 FOXR1Q6PIV2 292 aa6.63□□□□□ -1.35
VPS13B-209ENST00000521559 NBPF15Q8N660 670 aa6.63□□□□□ -1.35
VPS13B-209ENST00000521559 TIMMDC1Q9NPL8 285 aa6.63□□□□□ -1.35
VPS13B-209ENST00000521559 STK17AQ9UEE5 414 aa6.63□□□□□ -1.35
VPS13B-209ENST00000521559 GDF10P55107 478 aa6.62□□□□□ -1.35
VPS13B-209ENST00000521559 TRIM50Q86XT4 487 aa6.62□□□□□ -1.35
VPS13B-209ENST00000521559 VWA5B2Q8N398 1253 aa6.62□□□□□ -1.35
VPS13B-209ENST00000521559 CLUAP1Q96AJ1 413 aa6.62□□□□□ -1.35
VPS13B-209ENST00000521559 POM121CA8CG34 1229 aa6.61□□□□□ -1.35
VPS13B-209ENST00000521559 PIK3CDO00329 1044 aa6.61□□□□□ -1.35
VPS13B-209ENST00000521559 INHAP05111 366 aa6.61□□□□□ -1.35
VPS13B-209ENST00000521559 TLR1Q15399 786 aa6.61□□□□□ -1.35
VPS13B-209ENST00000521559 RIPOR1Q6ZS17 1223 aa6.61□□□□□ -1.35
VPS13B-209ENST00000521559 ZSCAN1Q8NBB4 408 aa6.61□□□□□ -1.35
VPS13B-209ENST00000521559 ETNK1Q9HBU6 452 aa6.61□□□□□ -1.35
VPS13B-209ENST00000521559 HRH3Q9Y5N1 445 aa6.61□□□□□ -1.35
VPS13B-209ENST00000521559 A0A1B0GTH6 734 aa6.6□□□□□ -1.35
VPS13B-209ENST00000521559 USP17L5A8MUK1 530 aa6.6□□□□□ -1.35
VPS13B-209ENST00000521559 BACH1O14867 736 aa6.6□□□□□ -1.35
VPS13B-209ENST00000521559 F11P03951 625 aa6.6□□□□□ -1.35
VPS13B-209ENST00000521559 ATP1A2P50993 1020 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms