RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 TFCP2L1Q9NZI6 479 aa20.84■□□□□ 0.93
PRKDC-204ENST00000521331 SMG6Q86US8 1419 aaKnown RBP20.84■□□□□ 0.93
PRKDC-204ENST00000521331 MEGF6O75095 1541 aa20.83■□□□□ 0.93
PRKDC-204ENST00000521331 KAT6BQ8WYB5 2073 aa20.83■□□□□ 0.93
PRKDC-204ENST00000521331 RRS1Q15050 365 aaKnown RBP20.83■□□□□ 0.93
PRKDC-204ENST00000521331 USP47Q96K76 1375 aa20.83■□□□□ 0.92
PRKDC-204ENST00000521331 PNPLA7Q6ZV29 1317 aa20.82■□□□□ 0.92
PRKDC-204ENST00000521331 CDCA8Q53HL2 280 aa20.82■□□□□ 0.92
PRKDC-204ENST00000521331 ZNF784Q8NCA9 323 aaPredicted RBP20.82■□□□□ 0.92
PRKDC-204ENST00000521331 GGNBP2Q9H3C7 697 aa20.82■□□□□ 0.92
PRKDC-204ENST00000521331 NSD2O96028 1365 aa20.82■□□□□ 0.92
PRKDC-204ENST00000521331 NBPF6Q5VWK0 638 aa20.81■□□□□ 0.92
PRKDC-204ENST00000521331 RAPGEF4Q8WZA2 1011 aa20.81■□□□□ 0.92
PRKDC-204ENST00000521331 NBPF4Q96M43 638 aa20.81■□□□□ 0.92
PRKDC-204ENST00000521331 CCNL1Q9UK58 526 aaPredicted RBP20.8■□□□□ 0.92
PRKDC-204ENST00000521331 KCNQ4P56696 695 aa20.79■□□□□ 0.92
PRKDC-204ENST00000521331 INSRP06213 1382 aa20.78■□□□□ 0.92
PRKDC-204ENST00000521331 KIF24Q5T7B8 1368 aa20.78■□□□□ 0.92
PRKDC-204ENST00000521331 TATP17735 454 aaPredicted RBP20.78■□□□□ 0.92
PRKDC-204ENST00000521331 USHBP1Q8N6Y0 703 aa20.78■□□□□ 0.92
PRKDC-204ENST00000521331 QSER1Q2KHR3 1735 aa20.78■□□□□ 0.92
PRKDC-204ENST00000521331 DOT1LQ8TEK3 1739 aa20.78■□□□□ 0.92
PRKDC-204ENST00000521331 HMGB2P26583 209 aaKnown RBP20.77■□□□□ 0.92
PRKDC-204ENST00000521331 GPR162Q16538 588 aa20.77■□□□□ 0.92
PRKDC-204ENST00000521331 FLT4P35916 1363 aa20.76■□□□□ 0.91
PRKDC-204ENST00000521331 KLHL34Q8N239 644 aa20.76■□□□□ 0.91
PRKDC-204ENST00000521331 PCDH11XQ9BZA7 1347 aa20.76■□□□□ 0.91
PRKDC-204ENST00000521331 PCDH11YQ9BZA8 1340 aa20.76■□□□□ 0.91
PRKDC-204ENST00000521331 HSP90AB2PQ58FF8 381 aa20.75■□□□□ 0.91
PRKDC-204ENST00000521331 SHANK3Q9BYB0 1731 aa20.75■□□□□ 0.91
PRKDC-204ENST00000521331 LY75O60449 1722 aa20.74■□□□□ 0.91
PRKDC-204ENST00000521331 RGPD2P0DJD1 1756 aa20.72■□□□□ 0.91
PRKDC-204ENST00000521331 COL24A1Q17RW2 1714 aa20.71■□□□□ 0.91
PRKDC-204ENST00000521331 MSH5O43196 834 aa20.71■□□□□ 0.91
PRKDC-204ENST00000521331 TRIM26Q12899 539 aaPredicted RBP20.71■□□□□ 0.91
PRKDC-204ENST00000521331 COL23A1Q86Y22 540 aaPredicted RBP20.7■□□□□ 0.9
PRKDC-204ENST00000521331 PELP1Q8IZL8 1130 aaKnown RBP20.69■□□□□ 0.9
PRKDC-204ENST00000521331 FLAD1Q8NFF5 587 aa20.69■□□□□ 0.9
PRKDC-204ENST00000521331 CARD14Q9BXL6 1004 aa20.69■□□□□ 0.9
PRKDC-204ENST00000521331 PALLDQ8WX93 1383 aa20.69■□□□□ 0.9
PRKDC-204ENST00000521331 NSD3Q9BZ95 1437 aa20.69■□□□□ 0.9
PRKDC-204ENST00000521331 CHD4Q14839 1912 aa20.68■□□□□ 0.9
PRKDC-204ENST00000521331 CYP27B1O15528 508 aa20.68■□□□□ 0.9
PRKDC-204ENST00000521331 NLGN2Q8NFZ4 835 aa20.68■□□□□ 0.9
PRKDC-204ENST00000521331 TUBGCP6Q96RT7 1819 aa20.68■□□□□ 0.9
PRKDC-204ENST00000521331 MPRIPQ6WCQ1 1025 aa20.67■□□□□ 0.9
PRKDC-204ENST00000521331 SMARCC1Q92922 1105 aaPredicted RBP20.67■□□□□ 0.9
PRKDC-204ENST00000521331 EMILIN1Q9Y6C2 1016 aa20.67■□□□□ 0.9
PRKDC-204ENST00000521331 KIF20BQ96Q89 1820 aa20.67■□□□□ 0.9
PRKDC-204ENST00000521331 TIMELESSQ9UNS1 1208 aa20.66■□□□□ 0.9
PRKDC-204ENST00000521331 GRIN3BO60391 1043 aa20.65■□□□□ 0.9
PRKDC-204ENST00000521331 NCAPD2Q15021 1401 aa20.64■□□□□ 0.89
PRKDC-204ENST00000521331 MSL1Q68DK7 614 aa20.64■□□□□ 0.89
PRKDC-204ENST00000521331 SPG7Q9UQ90 795 aa20.64■□□□□ 0.89
PRKDC-204ENST00000521331 WASHC2AQ641Q2 1341 aa20.63■□□□□ 0.89
PRKDC-204ENST00000521331 PPM1GO15355 546 aaPredicted RBP20.63■□□□□ 0.89
PRKDC-204ENST00000521331 C1QTNF8P60827 252 aa20.63■□□□□ 0.89
PRKDC-204ENST00000521331 NKX1-1Q15270 411 aaPredicted RBP20.63■□□□□ 0.89
PRKDC-204ENST00000521331 C5P01031 1676 aa20.61■□□□□ 0.89
PRKDC-204ENST00000521331 PIGBQ92521 554 aa20.61■□□□□ 0.89
PRKDC-204ENST00000521331 AK7Q96M32 723 aa20.61■□□□□ 0.89
PRKDC-204ENST00000521331 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.61■□□□□ 0.89
PRKDC-204ENST00000521331 CD2APQ9Y5K6 639 aa20.61■□□□□ 0.89
PRKDC-204ENST00000521331 GOLGB1Q14789 3259 aaKnown RBP20.6■□□□□ 0.89
PRKDC-204ENST00000521331 YBX3P16989 372 aaKnown RBP eCLIP20.6■□□□□ 0.899e-9■■□□□ 12.3
PRKDC-204ENST00000521331 GIGYF1O75420 1035 aaPredicted RBP20.59■□□□□ 0.89
PRKDC-204ENST00000521331 EYA1Q99502 592 aa20.59■□□□□ 0.89
PRKDC-204ENST00000521331 PKD1L3Q7Z443 1732 aa20.58■□□□□ 0.89
PRKDC-204ENST00000521331 SENP3-EIF4A1A0A087X0R7 540 aa20.58■□□□□ 0.89
PRKDC-204ENST00000521331 TMOD3Q9NYL9 352 aa20.57■□□□□ 0.88
PRKDC-204ENST00000521331 POLKQ9UBT6 870 aa20.57■□□□□ 0.88
PRKDC-204ENST00000521331 CLSPNQ9HAW4 1339 aa20.56■□□□□ 0.88
PRKDC-204ENST00000521331 TOGARAM1Q9Y4F4 1720 aa20.56■□□□□ 0.88
PRKDC-204ENST00000521331 LOC102724428A0A0B4J2F2 783 aa20.56■□□□□ 0.88
PRKDC-204ENST00000521331 SIK1P57059 783 aa20.56■□□□□ 0.88
PRKDC-204ENST00000521331 C4BP0C0L5 1744 aa20.56■□□□□ 0.88
PRKDC-204ENST00000521331 ANKRD26Q9UPS8 1709 aa20.56■□□□□ 0.88
PRKDC-204ENST00000521331 SSFA2P28290 1259 aa20.55■□□□□ 0.88
PRKDC-204ENST00000521331 IFNL2Q8IZJ0 200 aa20.55■□□□□ 0.88
PRKDC-204ENST00000521331 PLEKHG2Q9H7P9 1386 aa20.55■□□□□ 0.88
PRKDC-204ENST00000521331 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.54■□□□□ 0.88
PRKDC-204ENST00000521331 PHF14O94880 888 aa20.54■□□□□ 0.88
PRKDC-204ENST00000521331 PHKG2P15735 406 aa20.54■□□□□ 0.88
PRKDC-204ENST00000521331 TAF1LQ8IZX4 1826 aa20.53■□□□□ 0.88
PRKDC-204ENST00000521331 AMIGO3Q86WK7 504 aa20.53■□□□□ 0.88
PRKDC-204ENST00000521331 LINC00116Q8NCU8 138 aa20.52■□□□□ 0.88
PRKDC-204ENST00000521331 POLR3GLQ9BT43 218 aa20.52■□□□□ 0.88
PRKDC-204ENST00000521331 ITGB4P16144 1822 aa20.51■□□□□ 0.87
PRKDC-204ENST00000521331 EIF4A2Q14240 407 aaKnown RBP20.51■□□□□ 0.87
PRKDC-204ENST00000521331 ASAP1Q9ULH1 1129 aa20.51■□□□□ 0.87
PRKDC-204ENST00000521331 ATP6V1AP38606 617 aa20.5■□□□□ 0.87
PRKDC-204ENST00000521331 GNPATO15228 680 aa20.49■□□□□ 0.87
PRKDC-204ENST00000521331 TNNT2P45379 298 aaPredicted RBP20.49■□□□□ 0.87
PRKDC-204ENST00000521331 ITPK1Q13572 414 aa20.48■□□□□ 0.87
PRKDC-204ENST00000521331 SMIM5Q71RC9 77 aa20.48■□□□□ 0.87
PRKDC-204ENST00000521331 ATG3Q9NT62 314 aa20.48■□□□□ 0.87
PRKDC-204ENST00000521331 ATP10DQ9P241 1426 aa20.47■□□□□ 0.87
PRKDC-204ENST00000521331 HSP90AB1P08238 724 aaKnown RBP20.47■□□□□ 0.87
PRKDC-204ENST00000521331 MAP2P11137 1827 aaKnown RBP20.47■□□□□ 0.87
PRKDC-204ENST00000521331 UBR3Q6ZT12 1888 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms