RNA–Protein interactions for RNA: ENST00000521179.5

TVP23C-206, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-206ENST00000521179 PIK3CDO00329 1044 aa10.71□□□□□ -0.69
TVP23C-206ENST00000521179 CAPN5O15484 640 aaPredicted RBP10.71□□□□□ -0.69
TVP23C-206ENST00000521179 PRDM2Q13029 1718 aa10.71□□□□□ -0.69
TVP23C-206ENST00000521179 Q6ZNB5 142 aa10.71□□□□□ -0.69
TVP23C-206ENST00000521179 UCN2Q96RP3 112 aa10.71□□□□□ -0.69
TVP23C-206ENST00000521179 ZFAND3Q9H8U3 227 aa10.71□□□□□ -0.69
TVP23C-206ENST00000521179 PCDHB11Q9Y5F2 797 aa10.71□□□□□ -0.69
TVP23C-206ENST00000521179 WDR62O43379 1518 aa10.7□□□□□ -0.7
TVP23C-206ENST00000521179 AXIN1O15169 862 aa10.7□□□□□ -0.7
TVP23C-206ENST00000521179 LILRA1O75019 489 aa10.7□□□□□ -0.7
TVP23C-206ENST00000521179 MAP7D1Q3KQU3 841 aa10.7□□□□□ -0.7
TVP23C-206ENST00000521179 TRAF7Q6Q0C0 670 aa10.7□□□□□ -0.7
TVP23C-206ENST00000521179 ZNF784Q8NCA9 323 aaPredicted RBP10.7□□□□□ -0.7
TVP23C-206ENST00000521179 AAASQ9NRG9 546 aa10.7□□□□□ -0.7
TVP23C-206ENST00000521179 LCE2BO14633 110 aa10.69□□□□□ -0.7
TVP23C-206ENST00000521179 PLPP7Q8NBV4 271 aa10.69□□□□□ -0.7
TVP23C-206ENST00000521179 ERVK-9P63128 1117 aa10.68□□□□□ -0.7
TVP23C-206ENST00000521179 Q6ZVU0 165 aa10.68□□□□□ -0.7
TVP23C-206ENST00000521179 CDCA7Q9BWT1 371 aaPredicted RBP10.68□□□□□ -0.7
TVP23C-206ENST00000521179 DOLKQ9UPQ8 538 aa10.68□□□□□ -0.7
TVP23C-206ENST00000521179 LZTS3O60299 673 aaPredicted RBP10.67□□□□□ -0.7
TVP23C-206ENST00000521179 SKIP12755 728 aa10.67□□□□□ -0.7
TVP23C-206ENST00000521179 TBC1D9Q6ZT07 1266 aa10.67□□□□□ -0.7
TVP23C-206ENST00000521179 URB2Q14146 1524 aaKnown RBP10.67□□□□□ -0.7
TVP23C-206ENST00000521179 ARAP1Q96P48 1450 aa10.67□□□□□ -0.7
TVP23C-206ENST00000521179 ST8SIA5O15466 376 aa10.66□□□□□ -0.7
TVP23C-206ENST00000521179 ADD1P35611 737 aaKnown RBP10.66□□□□□ -0.7
TVP23C-206ENST00000521179 CC2D2BQ6DHV5 1058 aa10.66□□□□□ -0.7
TVP23C-206ENST00000521179 CYLDQ9NQC7 956 aa10.66□□□□□ -0.7
TVP23C-206ENST00000521179 ARID3CA6NKF2 412 aa10.65□□□□□ -0.7
TVP23C-206ENST00000521179 ATP9BO43861 1147 aa10.65□□□□□ -0.7
TVP23C-206ENST00000521179 SCTRP47872 440 aa10.65□□□□□ -0.7
TVP23C-206ENST00000521179 USP4Q13107 963 aa10.65□□□□□ -0.7
TVP23C-206ENST00000521179 CBLBQ13191 982 aa10.65□□□□□ -0.7
TVP23C-206ENST00000521179 PPP1R12CQ9BZL4 782 aa10.65□□□□□ -0.7
TVP23C-206ENST00000521179 MEIOBQ8N635 442 aa10.64□□□□□ -0.71
TVP23C-206ENST00000521179 TFIP11Q9UBB9 837 aaKnown RBP10.64□□□□□ -0.71
TVP23C-206ENST00000521179 PALM3A6NDB9 673 aaPredicted RBP10.63□□□□□ -0.71
TVP23C-206ENST00000521179 PLEKHM2Q8IWE5 1019 aa10.63□□□□□ -0.71
TVP23C-206ENST00000521179 SIRT1Q96EB6 747 aa10.63□□□□□ -0.71
TVP23C-206ENST00000521179 C1orf115Q9H7X2 142 aa10.63□□□□□ -0.71
TVP23C-206ENST00000521179 USP17L5A8MUK1 530 aa10.62□□□□□ -0.71
TVP23C-206ENST00000521179 MYCP01106 439 aaPredicted RBP10.62□□□□□ -0.71
TVP23C-206ENST00000521179 OSBPL3Q9H4L5 887 aa10.62□□□□□ -0.71
TVP23C-206ENST00000521179 DACH1Q9UI36 760 aa10.62□□□□□ -0.71
TVP23C-206ENST00000521179 ADH1AP07327 375 aa10.61□□□□□ -0.71
TVP23C-206ENST00000521179 OXLD1Q5BKU9 147 aa10.61□□□□□ -0.71
TVP23C-206ENST00000521179 MRPL14Q6P1L8 145 aaKnown RBP10.61□□□□□ -0.71
TVP23C-206ENST00000521179 TRIM46Q7Z4K8 759 aa10.61□□□□□ -0.71
TVP23C-206ENST00000521179 KDF1Q8NAX2 398 aaPredicted RBP10.61□□□□□ -0.71
TVP23C-206ENST00000521179 TSEN34Q9BSV6 310 aaKnown RBP10.61□□□□□ -0.71
TVP23C-206ENST00000521179 ATP13A2Q9NQ11 1180 aa10.61□□□□□ -0.71
TVP23C-206ENST00000521179 TOPBP1Q92547 1522 aa10.61□□□□□ -0.71
TVP23C-206ENST00000521179 ABCC8Q09428 1581 aa10.6□□□□□ -0.71
TVP23C-206ENST00000521179 USP17L3A6NCW0 530 aa10.6□□□□□ -0.71
TVP23C-206ENST00000521179 USP17L4A6NCW7 530 aa10.6□□□□□ -0.71
TVP23C-206ENST00000521179 NCOA4Q13772 614 aa10.6□□□□□ -0.71
TVP23C-206ENST00000521179 EML3Q32P44 896 aa10.6□□□□□ -0.71
TVP23C-206ENST00000521179 USP17L2Q6R6M4 530 aa10.6□□□□□ -0.71
TVP23C-206ENST00000521179 USP17L1Q7RTZ2 530 aa10.6□□□□□ -0.71
TVP23C-206ENST00000521179 ESF1Q9H501 851 aaKnown RBP10.6□□□□□ -0.71
TVP23C-206ENST00000521179 MAFBQ9Y5Q3 323 aaPredicted RBP10.6□□□□□ -0.71
TVP23C-206ENST00000521179 DEPDC4Q8N2C3 294 aa10.59□□□□□ -0.71
TVP23C-206ENST00000521179 SERPINA10Q9UK55 444 aa10.59□□□□□ -0.71
TVP23C-206ENST00000521179 DNMBPQ6XZF7 1577 aa10.58□□□□□ -0.72
TVP23C-206ENST00000521179 BMP1P13497 986 aa10.58□□□□□ -0.72
TVP23C-206ENST00000521179 CFAP70Q5T0N1 1121 aa10.58□□□□□ -0.72
TVP23C-206ENST00000521179 CYP2U1Q7Z449 544 aa10.58□□□□□ -0.72
TVP23C-206ENST00000521179 LINC00528Q8N1L1 170 aa10.58□□□□□ -0.72
TVP23C-206ENST00000521179 AGBL1Q96MI9 1066 aa10.58□□□□□ -0.72
TVP23C-206ENST00000521179 NOD1Q9Y239 953 aa10.58□□□□□ -0.72
TVP23C-206ENST00000521179 ATP5J2-PTCD1G3V325 749 aa10.57□□□□□ -0.72
TVP23C-206ENST00000521179 UPP2O95045 317 aa10.57□□□□□ -0.72
TVP23C-206ENST00000521179 PTGIRP43119 386 aa10.57□□□□□ -0.72
TVP23C-206ENST00000521179 CCDC97Q96F63 343 aaPredicted RBP10.57□□□□□ -0.72
TVP23C-206ENST00000521179 LMOD1P29536 600 aaPredicted RBP10.56□□□□□ -0.72
TVP23C-206ENST00000521179 RELBQ01201 579 aa10.56□□□□□ -0.72
TVP23C-206ENST00000521179 SCARF1Q14162 830 aa10.56□□□□□ -0.72
TVP23C-206ENST00000521179 SPINT1O43278 529 aa10.55□□□□□ -0.72
TVP23C-206ENST00000521179 GNRH1P01148 92 aa10.55□□□□□ -0.72
TVP23C-206ENST00000521179 CCDC82Q8N4S0 544 aa10.55□□□□□ -0.72
TVP23C-206ENST00000521179 MKRN1Q9UHC7 482 aaKnown RBP10.55□□□□□ -0.72
TVP23C-206ENST00000521179 PCDHGA11Q9Y5H2 935 aa10.55□□□□□ -0.72
TVP23C-206ENST00000521179 IFT140Q96RY7 1462 aa10.55□□□□□ -0.72
TVP23C-206ENST00000521179 BMP2P12643 396 aa10.54□□□□□ -0.72
TVP23C-206ENST00000521179 ZFP42Q96MM3 310 aa10.54□□□□□ -0.72
TVP23C-206ENST00000521179 PURBQ96QR8 312 aaKnown RBP10.54□□□□□ -0.72
TVP23C-206ENST00000521179 KANK4Q5T7N3 995 aaPredicted RBP10.53□□□□□ -0.72
TVP23C-206ENST00000521179 TRIM50Q86XT4 487 aa10.53□□□□□ -0.72
TVP23C-206ENST00000521179 ZNF395Q9H8N7 513 aaPredicted RBP10.53□□□□□ -0.72
TVP23C-206ENST00000521179 A0A1W2PRU2 124 aa10.52□□□□□ -0.73
TVP23C-206ENST00000521179 GTF2IP78347 998 aa10.52□□□□□ -0.73
TVP23C-206ENST00000521179 C6orf118Q5T5N4 469 aa10.52□□□□□ -0.73
TVP23C-206ENST00000521179 SENP2Q9HC62 589 aa10.52□□□□□ -0.73
TVP23C-206ENST00000521179 GMPR2Q9P2T1 348 aaKnown RBP10.52□□□□□ -0.73
TVP23C-206ENST00000521179 ZNF608Q9ULD9 1512 aaPredicted RBP10.52□□□□□ -0.73
TVP23C-206ENST00000521179 SOGA1O94964 1423 aa10.51□□□□□ -0.73
TVP23C-206ENST00000521179 CUX1P39880 1505 aa10.51□□□□□ -0.73
TVP23C-206ENST00000521179 POLA1P09884 1462 aaPredicted RBP10.5□□□□□ -0.73
TVP23C-206ENST00000521179 ZBTB7BO15156 539 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms