RNA–Protein interactions for RNA: ENST00000521134.6

KCNQ3-204, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene KCNQ3, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-204ENST00000521134 CFAP53Q96M91 514 aa12.87□□□□□ -0.35
KCNQ3-204ENST00000521134 ZKSCAN5Q9Y2L8 839 aa12.87□□□□□ -0.35
KCNQ3-204ENST00000521134 PTPRUQ92729 1446 aa12.87□□□□□ -0.35
KCNQ3-204ENST00000521134 CCDC61Q9Y6R9 512 aa12.87□□□□□ -0.35
KCNQ3-204ENST00000521134 ZBTB22O15209 634 aa12.86□□□□□ -0.35
KCNQ3-204ENST00000521134 CGNQ9P2M7 1197 aaKnown RBP12.86□□□□□ -0.35
KCNQ3-204ENST00000521134 SETD1BQ9UPS6 1966 aaKnown RBP12.86□□□□□ -0.35
KCNQ3-204ENST00000521134 FYB1O15117 783 aa12.86□□□□□ -0.35
KCNQ3-204ENST00000521134 RARSP54136 660 aaKnown RBP12.86□□□□□ -0.35
KCNQ3-204ENST00000521134 NUDT16Q96DE0 195 aaKnown RBP12.86□□□□□ -0.35
KCNQ3-204ENST00000521134 CDC42BPGQ6DT37 1551 aa12.86□□□□□ -0.35
KCNQ3-204ENST00000521134 MCM5P33992 734 aa12.85□□□□□ -0.35
KCNQ3-204ENST00000521134 PDE3AQ14432 1141 aa12.85□□□□□ -0.35
KCNQ3-204ENST00000521134 C22orf23Q9BZE7 217 aa12.85□□□□□ -0.35
KCNQ3-204ENST00000521134 EDC4Q6P2E9 1401 aaKnown RBP12.85□□□□□ -0.35
KCNQ3-204ENST00000521134 PPIP5K1Q6PFW1 1433 aa12.85□□□□□ -0.35
KCNQ3-204ENST00000521134 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.85□□□□□ -0.35
KCNQ3-204ENST00000521134 ATP2B3Q16720 1220 aa12.85□□□□□ -0.35
KCNQ3-204ENST00000521134 AMOTL2Q9Y2J4 779 aa12.85□□□□□ -0.35
KCNQ3-204ENST00000521134 KIF20BQ96Q89 1820 aa12.85□□□□□ -0.35
KCNQ3-204ENST00000521134 XRN1Q8IZH2 1706 aaKnown RBP12.85□□□□□ -0.35
KCNQ3-204ENST00000521134 DDIT3P35638 169 aa12.84□□□□□ -0.35
KCNQ3-204ENST00000521134 SHPRHQ149N8 1683 aa12.84□□□□□ -0.35
KCNQ3-204ENST00000521134 ANKLE2Q86XL3 938 aa12.84□□□□□ -0.35
KCNQ3-204ENST00000521134 MYRIPQ8NFW9 859 aa12.84□□□□□ -0.35
KCNQ3-204ENST00000521134 SLC26A8Q96RN1 970 aa12.84□□□□□ -0.35
KCNQ3-204ENST00000521134 IBTKQ9P2D0 1353 aaPredicted RBP12.84□□□□□ -0.35
KCNQ3-204ENST00000521134 MTHFSP49914 203 aa12.83□□□□□ -0.35
KCNQ3-204ENST00000521134 PDLIM2Q96JY6 352 aa12.83□□□□□ -0.36
KCNQ3-204ENST00000521134 PLEKHG3A1L390 1219 aa12.82□□□□□ -0.36
KCNQ3-204ENST00000521134 RAB3GAP1Q15042 981 aa12.82□□□□□ -0.36
KCNQ3-204ENST00000521134 ZNF710Q8N1W2 664 aa12.82□□□□□ -0.36
KCNQ3-204ENST00000521134 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
KCNQ3-204ENST00000521134 MON2Q7Z3U7 1717 aa12.82□□□□□ -0.36
KCNQ3-204ENST00000521134 TOPAZ1Q8N9V7 1692 aa12.82□□□□□ -0.36
KCNQ3-204ENST00000521134 NCOA3Q9Y6Q9 1424 aa12.82□□□□□ -0.36
KCNQ3-204ENST00000521134 TCP11L2Q8N4U5 519 aa12.82□□□□□ -0.36
KCNQ3-204ENST00000521134 KCNG1Q9UIX4 513 aa12.82□□□□□ -0.36
KCNQ3-204ENST00000521134 AKAP12Q02952 1782 aa12.82□□□□□ -0.36
KCNQ3-204ENST00000521134 JARID2Q92833 1246 aaPredicted RBP12.81□□□□□ -0.36
KCNQ3-204ENST00000521134 ZNF592Q92610 1267 aa12.81□□□□□ -0.36
KCNQ3-204ENST00000521134 TSR2Q969E8 191 aaKnown RBP12.81□□□□□ -0.36
KCNQ3-204ENST00000521134 DDX49Q9Y6V7 483 aaKnown RBP12.81□□□□□ -0.36
KCNQ3-204ENST00000521134 PNPLA6Q8IY17 1366 aa12.81□□□□□ -0.36
KCNQ3-204ENST00000521134 GOLGA6L22H0YM25 854 aa12.8□□□□□ -0.36
KCNQ3-204ENST00000521134 PMFBP1Q8TBY8 1022 aa12.8□□□□□ -0.36
KCNQ3-204ENST00000521134 GGNBP2Q9H3C7 697 aa12.8□□□□□ -0.36
KCNQ3-204ENST00000521134 KLHL40Q2TBA0 621 aa12.8□□□□□ -0.36
KCNQ3-204ENST00000521134 ZNF771Q7L3S4 317 aaPredicted RBP12.8□□□□□ -0.36
KCNQ3-204ENST00000521134 TSC1Q92574 1164 aa12.8□□□□□ -0.36
KCNQ3-204ENST00000521134 CCDC39Q9UFE4 941 aa12.8□□□□□ -0.36
KCNQ3-204ENST00000521134 ITSN1Q15811 1721 aa12.8□□□□□ -0.36
KCNQ3-204ENST00000521134 PRR36Q9H6K5 1346 aa12.8□□□□□ -0.36
KCNQ3-204ENST00000521134 SPDYE4A6NLX3 237 aa12.79□□□□□ -0.36
KCNQ3-204ENST00000521134 ZNF445P59923 1031 aa12.79□□□□□ -0.36
KCNQ3-204ENST00000521134 SMC5Q8IY18 1101 aa12.79□□□□□ -0.36
KCNQ3-204ENST00000521134 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
KCNQ3-204ENST00000521134 COL3A1P02461 1466 aaPredicted RBP12.79□□□□□ -0.36
KCNQ3-204ENST00000521134 AATKQ6ZMQ8 1374 aa12.79□□□□□ -0.36
KCNQ3-204ENST00000521134 ANKARQ7Z5J8 1434 aa12.79□□□□□ -0.36
KCNQ3-204ENST00000521134 IRX5P78411 483 aaPredicted RBP12.78□□□□□ -0.36
KCNQ3-204ENST00000521134 RBM25P49756 843 aaKnown RBP12.78□□□□□ -0.36
KCNQ3-204ENST00000521134 PRIMPOLQ96LW4 560 aa12.78□□□□□ -0.36
KCNQ3-204ENST00000521134 RBSNQ9H1K0 784 aa12.78□□□□□ -0.36
KCNQ3-204ENST00000521134 RWDD1Q9H446 243 aaPredicted RBP12.78□□□□□ -0.36
KCNQ3-204ENST00000521134 HSP90AB1P08238 724 aaKnown RBP12.77□□□□□ -0.36
KCNQ3-204ENST00000521134 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.36
KCNQ3-204ENST00000521134 TMED8Q6PL24 325 aaPredicted RBP12.77□□□□□ -0.36
KCNQ3-204ENST00000521134 CHD2O14647 1828 aaKnown RBP12.77□□□□□ -0.36
KCNQ3-204ENST00000521134 CD2BP2O95400 341 aaKnown RBP12.77□□□□□ -0.37
KCNQ3-204ENST00000521134 HMGN5P82970 282 aaKnown RBP12.77□□□□□ -0.37
KCNQ3-204ENST00000521134 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
KCNQ3-204ENST00000521134 GTF2F1P35269 517 aaKnown RBP eCLIP12.76□□□□□ -0.37
KCNQ3-204ENST00000521134 IRX3P78415 501 aaPredicted RBP12.76□□□□□ -0.37
KCNQ3-204ENST00000521134 ZBTB7CA1YPR0 619 aa12.76□□□□□ -0.37
KCNQ3-204ENST00000521134 CLSTN1O94985 981 aa12.76□□□□□ -0.37
KCNQ3-204ENST00000521134 KIAA2012Q0VF49 1180 aa12.76□□□□□ -0.37
KCNQ3-204ENST00000521134 CCDC27Q2M243 656 aa12.76□□□□□ -0.37
KCNQ3-204ENST00000521134 IQSEC2Q5JU85 1478 aa12.76□□□□□ -0.37
KCNQ3-204ENST00000521134 KCNJ4P48050 445 aa12.76□□□□□ -0.37
KCNQ3-204ENST00000521134 SNX21Q969T3 373 aa12.76□□□□□ -0.37
KCNQ3-204ENST00000521134 DNAJC2Q99543 621 aaKnown RBP12.76□□□□□ -0.37
KCNQ3-204ENST00000521134 NRKQ7Z2Y5 1582 aa12.75□□□□□ -0.37
KCNQ3-204ENST00000521134 NPHP4O75161 1426 aaPredicted RBP12.75□□□□□ -0.37
KCNQ3-204ENST00000521134 ITPRIPQ8IWB1 547 aa12.75□□□□□ -0.37
KCNQ3-204ENST00000521134 SSH2Q76I76 1423 aa12.75□□□□□ -0.37
KCNQ3-204ENST00000521134 KCNA6P17658 529 aa12.75□□□□□ -0.37
KCNQ3-204ENST00000521134 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.75□□□□□ -0.37
KCNQ3-204ENST00000521134 PDCL2Q8N4E4 241 aa12.75□□□□□ -0.37
KCNQ3-204ENST00000521134 USP6P35125 1406 aa12.74□□□□□ -0.37
KCNQ3-204ENST00000521134 ACEP12821 1306 aa12.74□□□□□ -0.37
KCNQ3-204ENST00000521134 MVPQ14764 893 aaKnown RBP12.74□□□□□ -0.37
KCNQ3-204ENST00000521134 ZSCAN23Q3MJ62 389 aa12.74□□□□□ -0.37
KCNQ3-204ENST00000521134 COG3Q96JB2 828 aa12.74□□□□□ -0.37
KCNQ3-204ENST00000521134 LNPKQ9C0E8 428 aa12.74□□□□□ -0.37
KCNQ3-204ENST00000521134 KIF3AQ9Y496 699 aa12.74□□□□□ -0.37
KCNQ3-204ENST00000521134 SLC20A2Q08357 652 aa12.74□□□□□ -0.37
KCNQ3-204ENST00000521134 CAVIN1Q6NZI2 390 aaKnown RBP12.74□□□□□ -0.37
KCNQ3-204ENST00000521134 POLKQ9UBT6 870 aa12.74□□□□□ -0.37
KCNQ3-204ENST00000521134 TTC21BQ7Z4L5 1316 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms