RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 DOT1LQ8TEK3 1739 aa26.29■■□□□ 1.8
SNHG6-204ENST00000521127 AMPHP49418 695 aa26.29■■□□□ 1.8
SNHG6-204ENST00000521127 GPR162Q16538 588 aa26.29■■□□□ 1.8
SNHG6-204ENST00000521127 ZCRB1Q8TBF4 217 aaKnown RBP26.29■■□□□ 1.8
SNHG6-204ENST00000521127 TFCP2L1Q9NZI6 479 aa26.29■■□□□ 1.8
SNHG6-204ENST00000521127 SHANK3Q9BYB0 1731 aa26.28■■□□□ 1.8
SNHG6-204ENST00000521127 ST20-MTHFSA0A0A6YYL1 179 aa26.28■■□□□ 1.8
SNHG6-204ENST00000521127 KLHL34Q8N239 644 aa26.28■■□□□ 1.8
SNHG6-204ENST00000521127 TONSLQ96HA7 1378 aa26.28■■□□□ 1.8
SNHG6-204ENST00000521127 MEGF6O75095 1541 aa26.28■■□□□ 1.8
SNHG6-204ENST00000521127 POLD1P28340 1107 aa26.27■■□□□ 1.8
SNHG6-204ENST00000521127 LY75O60449 1722 aa26.27■■□□□ 1.8
SNHG6-204ENST00000521127 C1QTNF8P60827 252 aa26.24■■□□□ 1.79
SNHG6-204ENST00000521127 NBPF6Q5VWK0 638 aa26.23■■□□□ 1.79
SNHG6-204ENST00000521127 NLGN2Q8NFZ4 835 aa26.23■■□□□ 1.79
SNHG6-204ENST00000521127 NBPF4Q96M43 638 aa26.23■■□□□ 1.79
SNHG6-204ENST00000521127 RRS1Q15050 365 aaKnown RBP26.22■■□□□ 1.79
SNHG6-204ENST00000521127 CCNL1Q9UK58 526 aaPredicted RBP26.22■■□□□ 1.79
SNHG6-204ENST00000521127 PELP1Q8IZL8 1130 aaKnown RBP26.21■■□□□ 1.79
SNHG6-204ENST00000521127 USHBP1Q8N6Y0 703 aa26.2■■□□□ 1.78
SNHG6-204ENST00000521127 SENP3-EIF4A1A0A087X0R7 540 aa26.19■■□□□ 1.78
SNHG6-204ENST00000521127 FYB1O15117 783 aa26.19■■□□□ 1.78
SNHG6-204ENST00000521127 COL23A1Q86Y22 540 aaPredicted RBP26.19■■□□□ 1.78
SNHG6-204ENST00000521127 RTL1A6NKG5 1358 aa26.19■■□□□ 1.78
SNHG6-204ENST00000521127 GGNBP2Q9H3C7 697 aa26.18■■□□□ 1.78
SNHG6-204ENST00000521127 USP47Q96K76 1375 aa26.16■■□□□ 1.78
SNHG6-204ENST00000521127 GOLGB1Q14789 3259 aaKnown RBP26.15■■□□□ 1.78
SNHG6-204ENST00000521127 CGNL1Q0VF96 1302 aa26.14■■□□□ 1.78
SNHG6-204ENST00000521127 MSH5O43196 834 aa26.14■■□□□ 1.78
SNHG6-204ENST00000521127 SLC24A1O60721 1099 aa26.14■■□□□ 1.78
SNHG6-204ENST00000521127 YBX3P16989 372 aaKnown RBP eCLIP26.14■■□□□ 1.78
SNHG6-204ENST00000521127 RAPGEF4Q8WZA2 1011 aa26.13■■□□□ 1.77
SNHG6-204ENST00000521127 HSP90AB2PQ58FF8 381 aa26.12■■□□□ 1.77
SNHG6-204ENST00000521127 MSL1Q68DK7 614 aa26.12■■□□□ 1.77
SNHG6-204ENST00000521127 TATP17735 454 aaPredicted RBP26.11■■□□□ 1.77
SNHG6-204ENST00000521127 INSRP06213 1382 aa26.09■■□□□ 1.77
SNHG6-204ENST00000521127 GIGYF1O75420 1035 aaPredicted RBP26.09■■□□□ 1.77
SNHG6-204ENST00000521127 SMG6Q86US8 1419 aaKnown RBP26.08■■□□□ 1.77
SNHG6-204ENST00000521127 C5P01031 1676 aa26.08■■□□□ 1.77
SNHG6-204ENST00000521127 CYP27B1O15528 508 aa26.07■■□□□ 1.76
SNHG6-204ENST00000521127 GRIN3BO60391 1043 aa26.07■■□□□ 1.76
SNHG6-204ENST00000521127 TMF1P82094 1093 aa26.07■■□□□ 1.76
SNHG6-204ENST00000521127 PCDH11XQ9BZA7 1347 aa26.07■■□□□ 1.76
SNHG6-204ENST00000521127 PCDH11YQ9BZA8 1340 aa26.07■■□□□ 1.76
SNHG6-204ENST00000521127 TAF1LQ8IZX4 1826 aa26.06■■□□□ 1.76
SNHG6-204ENST00000521127 PALLDQ8WX93 1383 aa26.06■■□□□ 1.76
SNHG6-204ENST00000521127 MPRIPQ6WCQ1 1025 aa26.05■■□□□ 1.76
SNHG6-204ENST00000521127 FLT4P35916 1363 aa26.05■■□□□ 1.76
SNHG6-204ENST00000521127 KIF20BQ96Q89 1820 aa26.03■■□□□ 1.76
SNHG6-204ENST00000521127 TOGARAM1Q9Y4F4 1720 aa26.02■■□□□ 1.76
SNHG6-204ENST00000521127 AMIGO3Q86WK7 504 aa26.02■■□□□ 1.76
SNHG6-204ENST00000521127 FLAD1Q8NFF5 587 aa26.02■■□□□ 1.76
SNHG6-204ENST00000521127 CD2APQ9Y5K6 639 aa26.02■■□□□ 1.76
SNHG6-204ENST00000521127 KIF24Q5T7B8 1368 aa26.02■■□□□ 1.76
SNHG6-204ENST00000521127 ITGB4P16144 1822 aa26.02■■□□□ 1.76
SNHG6-204ENST00000521127 CARD14Q9BXL6 1004 aa26.01■■□□□ 1.75
SNHG6-204ENST00000521127 EMILIN1Q9Y6C2 1016 aa26.01■■□□□ 1.75
SNHG6-204ENST00000521127 SMIM5Q71RC9 77 aa25.99■■□□□ 1.75
SNHG6-204ENST00000521127 C4BP0C0L5 1744 aa25.98■■□□□ 1.75
SNHG6-204ENST00000521127 PIGBQ92521 554 aa25.98■■□□□ 1.75
SNHG6-204ENST00000521127 SMARCC1Q92922 1105 aaPredicted RBP25.98■■□□□ 1.75
SNHG6-204ENST00000521127 PKD1L3Q7Z443 1732 aa25.97■■□□□ 1.75
SNHG6-204ENST00000521127 NCAPD2Q15021 1401 aa25.97■■□□□ 1.75
SNHG6-204ENST00000521127 ATP10DQ9P241 1426 aa25.97■■□□□ 1.75
SNHG6-204ENST00000521127 HMGB2P26583 209 aaKnown RBP25.96■■□□□ 1.75
SNHG6-204ENST00000521127 NKX1-1Q15270 411 aaPredicted RBP25.95■■□□□ 1.74
SNHG6-204ENST00000521127 AK7Q96M32 723 aa25.95■■□□□ 1.74
SNHG6-204ENST00000521127 UBR3Q6ZT12 1888 aa25.95■■□□□ 1.74
SNHG6-204ENST00000521127 CDCA8Q53HL2 280 aa25.94■■□□□ 1.74
SNHG6-204ENST00000521127 NSD3Q9BZ95 1437 aa25.94■■□□□ 1.74
SNHG6-204ENST00000521127 MAP2P11137 1827 aaKnown RBP25.93■■□□□ 1.74
SNHG6-204ENST00000521127 PHF14O94880 888 aa25.93■■□□□ 1.74
SNHG6-204ENST00000521127 CEP350Q5VT06 3117 aa25.93■■□□□ 1.74
SNHG6-204ENST00000521127 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.92■■□□□ 1.74
SNHG6-204ENST00000521127 PPM1GO15355 546 aaPredicted RBP25.91■■□□□ 1.74
SNHG6-204ENST00000521127 LINC00116Q8NCU8 138 aa25.91■■□□□ 1.74
SNHG6-204ENST00000521127 LOC102724428A0A0B4J2F2 783 aa25.9■■□□□ 1.74
SNHG6-204ENST00000521127 SIK1P57059 783 aa25.9■■□□□ 1.74
SNHG6-204ENST00000521127 EYA1Q99502 592 aa25.9■■□□□ 1.74
SNHG6-204ENST00000521127 SPG7Q9UQ90 795 aa25.9■■□□□ 1.74
SNHG6-204ENST00000521127 WASHC2AQ641Q2 1341 aa25.89■■□□□ 1.74
SNHG6-204ENST00000521127 ADCY9O60503 1353 aa25.89■■□□□ 1.74
SNHG6-204ENST00000521127 IGSF1Q8N6C5 1336 aa25.88■■□□□ 1.73
SNHG6-204ENST00000521127 WWC3Q9ULE0 1092 aa25.88■■□□□ 1.73
SNHG6-204ENST00000521127 ASAP1Q9ULH1 1129 aa25.88■■□□□ 1.73
SNHG6-204ENST00000521127 ANKRD26Q9UPS8 1709 aa25.88■■□□□ 1.73
SNHG6-204ENST00000521127 SSFA2P28290 1259 aa25.87■■□□□ 1.73
SNHG6-204ENST00000521127 ITPK1Q13572 414 aa25.87■■□□□ 1.73
SNHG6-204ENST00000521127 GPBP1L1Q9HC44 474 aaPredicted RBP25.86■■□□□ 1.73
SNHG6-204ENST00000521127 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.86■■□□□ 1.73
SNHG6-204ENST00000521127 TMOD3Q9NYL9 352 aa25.85■■□□□ 1.73
SNHG6-204ENST00000521127 PHKG2P15735 406 aa25.84■■□□□ 1.73
SNHG6-204ENST00000521127 POLKQ9UBT6 870 aa25.84■■□□□ 1.73
SNHG6-204ENST00000521127 ZNF526Q8TF50 670 aaPredicted RBP25.83■■□□□ 1.73
SNHG6-204ENST00000521127 GNPATO15228 680 aa25.82■■□□□ 1.72
SNHG6-204ENST00000521127 ATG3Q9NT62 314 aa25.82■■□□□ 1.72
SNHG6-204ENST00000521127 ATP6V1AP38606 617 aa25.81■■□□□ 1.72
SNHG6-204ENST00000521127 IFNL2Q8IZJ0 200 aa25.81■■□□□ 1.72
SNHG6-204ENST00000521127 EIF4A2Q14240 407 aaKnown RBP25.78■■□□□ 1.72
SNHG6-204ENST00000521127 MMP10P09238 476 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms