RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 AKT1S1Q96B36 256 aa28.34■■■□□ 2.13
PABPC1-217ENST00000521067 SYTL4Q96C24 671 aaPredicted RBP28.34■■■□□ 2.13
PABPC1-217ENST00000521067 MYOM1P52179 1685 aa28.33■■■□□ 2.13
PABPC1-217ENST00000521067 RGPD2P0DJD1 1756 aa28.33■■■□□ 2.13
PABPC1-217ENST00000521067 SYT17Q9BSW7 474 aa28.33■■■□□ 2.13
PABPC1-217ENST00000521067 FHDC1Q9C0D6 1143 aaPredicted RBP28.33■■■□□ 2.13
PABPC1-217ENST00000521067 NSD2O96028 1365 aa28.32■■■□□ 2.12
PABPC1-217ENST00000521067 CDCA8Q53HL2 280 aa28.31■■■□□ 2.12
PABPC1-217ENST00000521067 SLC27A3Q5K4L6 730 aa28.31■■■□□ 2.12
PABPC1-217ENST00000521067 DCAF8L1A6NGE4 600 aa28.3■■■□□ 2.12
PABPC1-217ENST00000521067 INSRP06213 1382 aa28.27■■■□□ 2.12
PABPC1-217ENST00000521067 ARXQ96QS3 562 aa28.26■■■□□ 2.11
PABPC1-217ENST00000521067 TIMELESSQ9UNS1 1208 aa28.26■■■□□ 2.11
PABPC1-217ENST00000521067 SHANK3Q9BYB0 1731 aa28.26■■■□□ 2.11
PABPC1-217ENST00000521067 RAPGEF4Q8WZA2 1011 aa28.25■■■□□ 2.11
PABPC1-217ENST00000521067 EMILIN1Q9Y6C2 1016 aa28.25■■■□□ 2.11
PABPC1-217ENST00000521067 CGNL1Q0VF96 1302 aa28.24■■■□□ 2.11
PABPC1-217ENST00000521067 PNPLA7Q6ZV29 1317 aa28.24■■■□□ 2.11
PABPC1-217ENST00000521067 TATP17735 454 aaPredicted RBP28.23■■■□□ 2.11
PABPC1-217ENST00000521067 NSD3Q9BZ95 1437 aa28.23■■■□□ 2.11
PABPC1-217ENST00000521067 FLT4P35916 1363 aa28.23■■■□□ 2.11
PABPC1-217ENST00000521067 PCGF6Q9BYE7 350 aa28.22■■■□□ 2.11
PABPC1-217ENST00000521067 SMG6Q86US8 1419 aaKnown RBP28.21■■■□□ 2.11
PABPC1-217ENST00000521067 TFCP2L1Q9NZI6 479 aa28.21■■■□□ 2.11
PABPC1-217ENST00000521067 DOT1LQ8TEK3 1739 aa28.21■■■□□ 2.11
PABPC1-217ENST00000521067 SLC16A10Q8TF71 515 aa28.2■■■□□ 2.1
PABPC1-217ENST00000521067 KIF24Q5T7B8 1368 aa28.2■■■□□ 2.1
PABPC1-217ENST00000521067 CYP27B1O15528 508 aa28.19■■■□□ 2.1
PABPC1-217ENST00000521067 CCNL1Q9UK58 526 aaPredicted RBP28.19■■■□□ 2.1
PABPC1-217ENST00000521067 GOLGB1Q14789 3259 aaKnown RBP28.17■■■□□ 2.1
PABPC1-217ENST00000521067 KIF20BQ96Q89 1820 aa28.17■■■□□ 2.1
PABPC1-217ENST00000521067 MAP3K5Q99683 1374 aa28.15■■■□□ 2.1
PABPC1-217ENST00000521067 PPM1GO15355 546 aaPredicted RBP28.15■■■□□ 2.1
PABPC1-217ENST00000521067 PCDH11XQ9BZA7 1347 aa28.15■■■□□ 2.1
PABPC1-217ENST00000521067 PCDH11YQ9BZA8 1340 aa28.15■■■□□ 2.1
PABPC1-217ENST00000521067 CLSPNQ9HAW4 1339 aa28.15■■■□□ 2.1
PABPC1-217ENST00000521067 LY75O60449 1722 aa28.15■■■□□ 2.1
PABPC1-217ENST00000521067 MPRIPQ6WCQ1 1025 aa28.12■■■□□ 2.09
PABPC1-217ENST00000521067 COL23A1Q86Y22 540 aaPredicted RBP28.12■■■□□ 2.09
PABPC1-217ENST00000521067 WASHC2AQ641Q2 1341 aa28.12■■■□□ 2.09
PABPC1-217ENST00000521067 POLKQ9UBT6 870 aa28.11■■■□□ 2.09
PABPC1-217ENST00000521067 POLD1P28340 1107 aa28.1■■■□□ 2.09
PABPC1-217ENST00000521067 EYA1Q99502 592 aa28.1■■■□□ 2.09
PABPC1-217ENST00000521067 POLR3GLQ9BT43 218 aa28.1■■■□□ 2.09
PABPC1-217ENST00000521067 NCAPD2Q15021 1401 aa28.09■■■□□ 2.09
PABPC1-217ENST00000521067 QSER1Q2KHR3 1735 aa28.09■■■□□ 2.09
PABPC1-217ENST00000521067 TUBGCP6Q96RT7 1819 aa28.08■■■□□ 2.09
PABPC1-217ENST00000521067 KLHL34Q8N239 644 aa28.07■■■□□ 2.08
PABPC1-217ENST00000521067 NKX1-1Q15270 411 aaPredicted RBP28.06■■■□□ 2.08
PABPC1-217ENST00000521067 ZNF784Q8NCA9 323 aaPredicted RBP28.06■■■□□ 2.08
PABPC1-217ENST00000521067 PIGBQ92521 554 aa28.06■■■□□ 2.08
PABPC1-217ENST00000521067 PALLDQ8WX93 1383 aa28.06■■■□□ 2.08
PABPC1-217ENST00000521067 MSH5O43196 834 aa28.05■■■□□ 2.08
PABPC1-217ENST00000521067 COL24A1Q17RW2 1714 aa28.05■■■□□ 2.08
PABPC1-217ENST00000521067 HSPA5P11021 654 aaKnown RBP28.04■■■□□ 2.08
PABPC1-217ENST00000521067 TNNT2P45379 298 aaPredicted RBP28.04■■■□□ 2.08
PABPC1-217ENST00000521067 NLGN2Q8NFZ4 835 aa28.04■■■□□ 2.08
PABPC1-217ENST00000521067 GPR162Q16538 588 aa28.02■■■□□ 2.08
PABPC1-217ENST00000521067 MSL1Q68DK7 614 aa28.02■■■□□ 2.08
PABPC1-217ENST00000521067 AMIGO3Q86WK7 504 aa28.02■■■□□ 2.08
PABPC1-217ENST00000521067 SPG7Q9UQ90 795 aa28.02■■■□□ 2.08
PABPC1-217ENST00000521067 EIF4G2P78344 907 aaKnown RBP eCLIP28.01■■■□□ 2.07
PABPC1-217ENST00000521067 EIF4A2Q14240 407 aaKnown RBP28.01■■■□□ 2.07
PABPC1-217ENST00000521067 TOGARAM1Q9Y4F4 1720 aa28.01■■■□□ 2.07
PABPC1-217ENST00000521067 SMIM5Q71RC9 77 aa28■■■□□ 2.07
PABPC1-217ENST00000521067 PANK3Q9H999 370 aa28■■■□□ 2.07
PABPC1-217ENST00000521067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28■■■□□ 2.07
PABPC1-217ENST00000521067 ANKRD26Q9UPS8 1709 aa28■■■□□ 2.07
PABPC1-217ENST00000521067 PKD1L3Q7Z443 1732 aa27.99■■■□□ 2.07
PABPC1-217ENST00000521067 SMARCC1Q92922 1105 aaPredicted RBP27.99■■■□□ 2.07
PABPC1-217ENST00000521067 MAP2P11137 1827 aaKnown RBP27.99■■■□□ 2.07
PABPC1-217ENST00000521067 PHKG2P15735 406 aa27.96■■■□□ 2.07
PABPC1-217ENST00000521067 PELP1Q8IZL8 1130 aaKnown RBP27.95■■■□□ 2.06
PABPC1-217ENST00000521067 ASAP1Q9ULH1 1129 aa27.95■■■□□ 2.06
PABPC1-217ENST00000521067 ITGB4P16144 1822 aa27.95■■■□□ 2.06
PABPC1-217ENST00000521067 IFNL2Q8IZJ0 200 aa27.94■■■□□ 2.06
PABPC1-217ENST00000521067 FLAD1Q8NFF5 587 aa27.94■■■□□ 2.06
PABPC1-217ENST00000521067 C5P01031 1676 aa27.94■■■□□ 2.06
PABPC1-217ENST00000521067 LOC102724428A0A0B4J2F2 783 aa27.93■■■□□ 2.06
PABPC1-217ENST00000521067 SIK1P57059 783 aa27.93■■■□□ 2.06
PABPC1-217ENST00000521067 LINC00116Q8NCU8 138 aa27.92■■■□□ 2.06
PABPC1-217ENST00000521067 TAF1LQ8IZX4 1826 aa27.91■■■□□ 2.06
PABPC1-217ENST00000521067 YBX3P16989 372 aaKnown RBP eCLIP27.91■■■□□ 2.064e-27■□□□□ 9.7
PABPC1-217ENST00000521067 AK7Q96M32 723 aa27.91■■■□□ 2.06
PABPC1-217ENST00000521067 TMOD3Q9NYL9 352 aa27.91■■■□□ 2.06
PABPC1-217ENST00000521067 HMGB2P26583 209 aaKnown RBP27.9■■■□□ 2.06
PABPC1-217ENST00000521067 ITPK1Q13572 414 aa27.9■■■□□ 2.06
PABPC1-217ENST00000521067 ATG3Q9NT62 314 aa27.9■■■□□ 2.06
PABPC1-217ENST00000521067 CHD4Q14839 1912 aa27.9■■■□□ 2.06
PABPC1-217ENST00000521067 IGSF1Q8N6C5 1336 aa27.9■■■□□ 2.06
PABPC1-217ENST00000521067 PHF14O94880 888 aa27.89■■■□□ 2.06
PABPC1-217ENST00000521067 CCER1Q8TC90 406 aaPredicted RBP27.89■■■□□ 2.06
PABPC1-217ENST00000521067 C4BP0C0L5 1744 aa27.89■■■□□ 2.05
PABPC1-217ENST00000521067 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.88■■■□□ 2.05
PABPC1-217ENST00000521067 CD2APQ9Y5K6 639 aa27.85■■■□□ 2.05
PABPC1-217ENST00000521067 ATP6V1AP38606 617 aa27.84■■■□□ 2.05
PABPC1-217ENST00000521067 MORC1Q86VD1 984 aa27.84■■■□□ 2.05
PABPC1-217ENST00000521067 SLC4A9Q96Q91 983 aa27.84■■■□□ 2.05
PABPC1-217ENST00000521067 SSFA2P28290 1259 aa27.83■■■□□ 2.05
PABPC1-217ENST00000521067 AEBP1Q8IUX7 1158 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms