RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 FBLN1P23142 703 aa23.14■■□□□ 1.29
TRAM1-204ENST00000521049 CCNL1Q9UK58 526 aaPredicted RBP23.13■■□□□ 1.29
TRAM1-204ENST00000521049 KAT6BQ8WYB5 2073 aa23.13■■□□□ 1.29
TRAM1-204ENST00000521049 NSD2O96028 1365 aa23.13■■□□□ 1.29
TRAM1-204ENST00000521049 CHD4Q14839 1912 aa23.12■■□□□ 1.29
TRAM1-204ENST00000521049 ST20-MTHFSA0A0A6YYL1 179 aa23.12■■□□□ 1.29
TRAM1-204ENST00000521049 CGNL1Q0VF96 1302 aa23.11■■□□□ 1.29
TRAM1-204ENST00000521049 HMGB2P26583 209 aaKnown RBP23.11■■□□□ 1.29
TRAM1-204ENST00000521049 PELP1Q8IZL8 1130 aaKnown RBP23.11■■□□□ 1.29
TRAM1-204ENST00000521049 TONSLQ96HA7 1378 aa23.11■■□□□ 1.29
TRAM1-204ENST00000521049 NBPF6Q5VWK0 638 aa23.1■■□□□ 1.29
TRAM1-204ENST00000521049 NLGN2Q8NFZ4 835 aa23.1■■□□□ 1.29
TRAM1-204ENST00000521049 NBPF4Q96M43 638 aa23.1■■□□□ 1.29
TRAM1-204ENST00000521049 GRIN3BO60391 1043 aa23.09■■□□□ 1.29
TRAM1-204ENST00000521049 COL23A1Q86Y22 540 aaPredicted RBP23.09■■□□□ 1.29
TRAM1-204ENST00000521049 QSER1Q2KHR3 1735 aa23.08■■□□□ 1.29
TRAM1-204ENST00000521049 USP47Q96K76 1375 aa23.08■■□□□ 1.29
TRAM1-204ENST00000521049 FAM208AQ9UK61 1670 aaKnown RBP23.08■■□□□ 1.29
TRAM1-204ENST00000521049 RTL1A6NKG5 1358 aa23.07■■□□□ 1.28
TRAM1-204ENST00000521049 FYB1O15117 783 aa23.07■■□□□ 1.28
TRAM1-204ENST00000521049 MSH5O43196 834 aa23.07■■□□□ 1.28
TRAM1-204ENST00000521049 GIGYF1O75420 1035 aaPredicted RBP23.07■■□□□ 1.28
TRAM1-204ENST00000521049 RAPGEF4Q8WZA2 1011 aa23.07■■□□□ 1.28
TRAM1-204ENST00000521049 COL24A1Q17RW2 1714 aa23.07■■□□□ 1.28
TRAM1-204ENST00000521049 RRS1Q15050 365 aaKnown RBP23.06■■□□□ 1.28
TRAM1-204ENST00000521049 MEGF6O75095 1541 aa23.06■■□□□ 1.28
TRAM1-204ENST00000521049 TATP17735 454 aaPredicted RBP23.04■■□□□ 1.28
TRAM1-204ENST00000521049 FLAD1Q8NFF5 587 aa23.04■■□□□ 1.28
TRAM1-204ENST00000521049 YBX3P16989 372 aaKnown RBP eCLIP23.03■■□□□ 1.287e-10■□□□□ 10.2
TRAM1-204ENST00000521049 GGNBP2Q9H3C7 697 aa23.03■■□□□ 1.28
TRAM1-204ENST00000521049 USHBP1Q8N6Y0 703 aa23.02■■□□□ 1.28
TRAM1-204ENST00000521049 CD2APQ9Y5K6 639 aa23.01■■□□□ 1.27
TRAM1-204ENST00000521049 LY75O60449 1722 aa23.01■■□□□ 1.27
TRAM1-204ENST00000521049 SMG6Q86US8 1419 aaKnown RBP23■■□□□ 1.27
TRAM1-204ENST00000521049 HSP90AB2PQ58FF8 381 aa23■■□□□ 1.27
TRAM1-204ENST00000521049 TMF1P82094 1093 aa22.99■■□□□ 1.27
TRAM1-204ENST00000521049 PCDH11XQ9BZA7 1347 aa22.99■■□□□ 1.27
TRAM1-204ENST00000521049 PCDH11YQ9BZA8 1340 aa22.99■■□□□ 1.27
TRAM1-204ENST00000521049 INSRP06213 1382 aa22.99■■□□□ 1.27
TRAM1-204ENST00000521049 DOT1LQ8TEK3 1739 aa22.99■■□□□ 1.27
TRAM1-204ENST00000521049 MSL1Q68DK7 614 aa22.98■■□□□ 1.27
TRAM1-204ENST00000521049 MPRIPQ6WCQ1 1025 aa22.97■■□□□ 1.27
TRAM1-204ENST00000521049 KIF24Q5T7B8 1368 aa22.97■■□□□ 1.27
TRAM1-204ENST00000521049 SMARCC1Q92922 1105 aaPredicted RBP22.96■■□□□ 1.27
TRAM1-204ENST00000521049 SHANK3Q9BYB0 1731 aa22.96■■□□□ 1.27
TRAM1-204ENST00000521049 CYP27B1O15528 508 aa22.95■■□□□ 1.26
TRAM1-204ENST00000521049 PALLDQ8WX93 1383 aa22.95■■□□□ 1.26
TRAM1-204ENST00000521049 TUBGCP6Q96RT7 1819 aa22.95■■□□□ 1.26
TRAM1-204ENST00000521049 FLT4P35916 1363 aa22.94■■□□□ 1.26
TRAM1-204ENST00000521049 GOLGB1Q14789 3259 aaKnown RBP22.94■■□□□ 1.26
TRAM1-204ENST00000521049 CDCA8Q53HL2 280 aa22.93■■□□□ 1.26
TRAM1-204ENST00000521049 RGPD2P0DJD1 1756 aa22.93■■□□□ 1.26
TRAM1-204ENST00000521049 NKX1-1Q15270 411 aaPredicted RBP22.91■■□□□ 1.26
TRAM1-204ENST00000521049 AK7Q96M32 723 aa22.9■■□□□ 1.26
TRAM1-204ENST00000521049 PIGBQ92521 554 aa22.89■■□□□ 1.25
TRAM1-204ENST00000521049 ATP10DQ9P241 1426 aa22.88■■□□□ 1.25
TRAM1-204ENST00000521049 CARD14Q9BXL6 1004 aa22.87■■□□□ 1.25
TRAM1-204ENST00000521049 GPBP1L1Q9HC44 474 aaPredicted RBP22.87■■□□□ 1.25
TRAM1-204ENST00000521049 SPG7Q9UQ90 795 aa22.87■■□□□ 1.25
TRAM1-204ENST00000521049 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.86■■□□□ 1.25
TRAM1-204ENST00000521049 SSFA2P28290 1259 aa22.86■■□□□ 1.25
TRAM1-204ENST00000521049 AMIGO3Q86WK7 504 aa22.86■■□□□ 1.25
TRAM1-204ENST00000521049 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.86■■□□□ 1.25
TRAM1-204ENST00000521049 EMILIN1Q9Y6C2 1016 aa22.86■■□□□ 1.25
TRAM1-204ENST00000521049 NSD3Q9BZ95 1437 aa22.85■■□□□ 1.25
TRAM1-204ENST00000521049 LOC102724428A0A0B4J2F2 783 aa22.84■■□□□ 1.25
TRAM1-204ENST00000521049 SIK1P57059 783 aa22.84■■□□□ 1.25
TRAM1-204ENST00000521049 C5P01031 1676 aa22.84■■□□□ 1.25
TRAM1-204ENST00000521049 PHF14O94880 888 aa22.83■■□□□ 1.25
TRAM1-204ENST00000521049 IFFO2Q5TF58 517 aa22.83■■□□□ 1.25
TRAM1-204ENST00000521049 WASHC2AQ641Q2 1341 aa22.82■■□□□ 1.24
TRAM1-204ENST00000521049 ADCY9O60503 1353 aa22.82■■□□□ 1.24
TRAM1-204ENST00000521049 SMIM5Q71RC9 77 aa22.82■■□□□ 1.24
TRAM1-204ENST00000521049 NCAPD2Q15021 1401 aa22.82■■□□□ 1.24
TRAM1-204ENST00000521049 IGSF1Q8N6C5 1336 aa22.82■■□□□ 1.24
TRAM1-204ENST00000521049 PPM1GO15355 546 aaPredicted RBP22.81■■□□□ 1.24
TRAM1-204ENST00000521049 LINC00116Q8NCU8 138 aa22.81■■□□□ 1.24
TRAM1-204ENST00000521049 C4BP0C0L5 1744 aa22.8■■□□□ 1.24
TRAM1-204ENST00000521049 EYA1Q99502 592 aa22.8■■□□□ 1.24
TRAM1-204ENST00000521049 TMOD3Q9NYL9 352 aa22.8■■□□□ 1.24
TRAM1-204ENST00000521049 IFNL2Q8IZJ0 200 aa22.79■■□□□ 1.24
TRAM1-204ENST00000521049 ASAP1Q9ULH1 1129 aa22.79■■□□□ 1.24
TRAM1-204ENST00000521049 ATP6V1AP38606 617 aa22.78■■□□□ 1.24
TRAM1-204ENST00000521049 TAF1LQ8IZX4 1826 aa22.78■■□□□ 1.24
TRAM1-204ENST00000521049 PHKG2P15735 406 aa22.77■■□□□ 1.24
TRAM1-204ENST00000521049 HSPA6P17066 643 aa22.77■■□□□ 1.24
TRAM1-204ENST00000521049 ITPK1Q13572 414 aa22.77■■□□□ 1.24
TRAM1-204ENST00000521049 GNPATO15228 680 aa22.76■■□□□ 1.23
TRAM1-204ENST00000521049 ZNF526Q8TF50 670 aaPredicted RBP22.76■■□□□ 1.23
TRAM1-204ENST00000521049 CEP350Q5VT06 3117 aa22.75■■□□□ 1.23
TRAM1-204ENST00000521049 ATG3Q9NT62 314 aa22.75■■□□□ 1.23
TRAM1-204ENST00000521049 POLKQ9UBT6 870 aa22.75■■□□□ 1.23
TRAM1-204ENST00000521049 WWC3Q9ULE0 1092 aa22.74■■□□□ 1.23
TRAM1-204ENST00000521049 PKD1L3Q7Z443 1732 aa22.74■■□□□ 1.23
TRAM1-204ENST00000521049 TOGARAM1Q9Y4F4 1720 aa22.74■■□□□ 1.23
TRAM1-204ENST00000521049 MMP10P09238 476 aa22.72■■□□□ 1.23
TRAM1-204ENST00000521049 TGFB2P61812 414 aa22.72■■□□□ 1.23
TRAM1-204ENST00000521049 TRAPPC3LQ5T215 181 aa22.72■■□□□ 1.23
TRAM1-204ENST00000521049 NLGN1Q8N2Q7 840 aa22.72■■□□□ 1.23
TRAM1-204ENST00000521049 ITGB4P16144 1822 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms