RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, human

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSR1-211	ENST00000520846	GLMN	Q92990	594 aa		10.23	□□□□□ -0.77
MSR1-211	ENST00000520846	ATP5J2-PTCD1	G3V325	749 aa		10.22	□□□□□ -0.77
MSR1-211	ENST00000520846	PTGIR	P43119	386 aa		10.22	□□□□□ -0.77
MSR1-211	ENST00000520846	USP4	Q13107	963 aa		10.22	□□□□□ -0.77
MSR1-211	ENST00000520846	OXLD1	Q5BKU9	147 aa		10.22	□□□□□ -0.77
MSR1-211	ENST00000520846	OSBPL3	Q9H4L5	887 aa		10.22	□□□□□ -0.77
MSR1-211	ENST00000520846	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.22	□□□□□ -0.77
MSR1-211	ENST00000520846	SKI	P12755	728 aa		10.21	□□□□□ -0.77
MSR1-211	ENST00000520846	CYP2U1	Q7Z449	544 aa		10.21	□□□□□ -0.77
MSR1-211	ENST00000520846	SIRT1	Q96EB6	747 aa		10.2	□□□□□ -0.78
MSR1-211	ENST00000520846	CALR3	Q96L12	384 aa	Known RBP	10.2	□□□□□ -0.78
MSR1-211	ENST00000520846	INSM2	Q96T92	566 aa	Predicted RBP	10.2	□□□□□ -0.78
MSR1-211	ENST00000520846	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.2	□□□□□ -0.78
MSR1-211	ENST00000520846	SOS2	Q07890	1332 aa	Predicted RBP	10.19	□□□□□ -0.78
MSR1-211	ENST00000520846	UCN2	Q96RP3	112 aa		10.19	□□□□□ -0.78
MSR1-211	ENST00000520846	TTLL8	A6PVC2	850 aa		10.18	□□□□□ -0.78
MSR1-211	ENST00000520846	MAN1A2	O60476	641 aa		10.18	□□□□□ -0.78
MSR1-211	ENST00000520846	CTSO	P43234	321 aa	Predicted RBP	10.17	□□□□□ -0.78
MSR1-211	ENST00000520846	TBC1D9	Q6ZT07	1266 aa		10.17	□□□□□ -0.78
MSR1-211	ENST00000520846	POLM	Q9NP87	494 aa	Predicted RBP	10.17	□□□□□ -0.78
MSR1-211	ENST00000520846		A0A1W2PRU2	124 aa		10.16	□□□□□ -0.78
MSR1-211	ENST00000520846	USP17L5	A8MUK1	530 aa		10.16	□□□□□ -0.78
MSR1-211	ENST00000520846	LZTS3	O60299	673 aa	Predicted RBP	10.16	□□□□□ -0.78
MSR1-211	ENST00000520846	GNRH1	P01148	92 aa		10.16	□□□□□ -0.78
MSR1-211	ENST00000520846	SOBP	A7XYQ1	873 aa		10.15	□□□□□ -0.78
MSR1-211	ENST00000520846	MEN1	O00255	615 aa		10.15	□□□□□ -0.78
MSR1-211	ENST00000520846	ATP9B	O43861	1147 aa		10.15	□□□□□ -0.78
MSR1-211	ENST00000520846	EML3	Q32P44	896 aa		10.15	□□□□□ -0.78
MSR1-211	ENST00000520846	C14orf37	Q86TY3	774 aa		10.15	□□□□□ -0.78
MSR1-211	ENST00000520846	ARHGEF10L	Q9HCE6	1279 aa		10.15	□□□□□ -0.78
MSR1-211	ENST00000520846	DNMT3L	Q9UJW3	386 aa		10.15	□□□□□ -0.78
MSR1-211	ENST00000520846	FIGNL2	A6NMB9	653 aa		10.14	□□□□□ -0.79
MSR1-211	ENST00000520846	CLN3	Q13286	438 aa		10.14	□□□□□ -0.79
MSR1-211	ENST00000520846	NCOA4	Q13772	614 aa		10.14	□□□□□ -0.79
MSR1-211	ENST00000520846	DEPDC4	Q8N2C3	294 aa		10.14	□□□□□ -0.79
MSR1-211	ENST00000520846	NOD1	Q9Y239	953 aa		10.14	□□□□□ -0.79
MSR1-211	ENST00000520846	NLRP3	Q96P20	1036 aa		10.13	□□□□□ -0.79
MSR1-211	ENST00000520846	RAB6B	Q9NRW1	208 aa		10.13	□□□□□ -0.79
MSR1-211	ENST00000520846	TFIP11	Q9UBB9	837 aa	Known RBP	10.13	□□□□□ -0.79
MSR1-211	ENST00000520846	USP17L3	A6NCW0	530 aa		10.12	□□□□□ -0.79
MSR1-211	ENST00000520846	USP17L4	A6NCW7	530 aa		10.12	□□□□□ -0.79
MSR1-211	ENST00000520846	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.12	□□□□□ -0.79
MSR1-211	ENST00000520846	USP17L2	Q6R6M4	530 aa		10.12	□□□□□ -0.79
MSR1-211	ENST00000520846	USP17L1	Q7RTZ2	530 aa		10.12	□□□□□ -0.79
MSR1-211	ENST00000520846	PLEKHM2	Q8IWE5	1019 aa		10.12	□□□□□ -0.79
MSR1-211	ENST00000520846	RNF217	Q8TC41	542 aa		10.12	□□□□□ -0.79
MSR1-211	ENST00000520846	RNF144A	P50876	292 aa	Predicted RBP	10.11	□□□□□ -0.79
MSR1-211	ENST00000520846	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.11	□□□□□ -0.79
MSR1-211	ENST00000520846	PPP1R12C	Q9BZL4	782 aa		10.11	□□□□□ -0.79
MSR1-211	ENST00000520846	PALM3	A6NDB9	673 aa	Predicted RBP	10.1	□□□□□ -0.79
MSR1-211	ENST00000520846	GPC1	P35052	558 aa		10.1	□□□□□ -0.79
MSR1-211	ENST00000520846	ESCO1	Q5FWF5	840 aa		10.1	□□□□□ -0.79
MSR1-211	ENST00000520846	CNKSR1	Q969H4	720 aa		10.1	□□□□□ -0.79
MSR1-211	ENST00000520846	ZNF775	Q96BV0	537 aa	Predicted RBP	10.1	□□□□□ -0.79
MSR1-211	ENST00000520846	ESYT1	Q9BSJ8	1104 aa		10.1	□□□□□ -0.79
MSR1-211	ENST00000520846	IL2RA	P01589	272 aa		10.09	□□□□□ -0.79
MSR1-211	ENST00000520846	GTF2I	P78347	998 aa		10.09	□□□□□ -0.79
MSR1-211	ENST00000520846	ETNK1	Q9HBU6	452 aa		10.09	□□□□□ -0.79
MSR1-211	ENST00000520846	PCDHGA11	Q9Y5H2	935 aa		10.09	□□□□□ -0.79
MSR1-211	ENST00000520846	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.09	□□□□□ -0.79
MSR1-211	ENST00000520846	STAU1	O95793	577 aa	Known RBP	10.08	□□□□□ -0.8
MSR1-211	ENST00000520846	SLC27A3	Q5K4L6	730 aa		10.08	□□□□□ -0.8
MSR1-211	ENST00000520846	TRIM50	Q86XT4	487 aa		10.08	□□□□□ -0.8
MSR1-211	ENST00000520846	XAGE2	Q96GT9	111 aa		10.08	□□□□□ -0.8
MSR1-211	ENST00000520846	ERICH6	Q7L0X2	663 aa		10.07	□□□□□ -0.8
MSR1-211	ENST00000520846	LYSMD3	Q7Z3D4	306 aa		10.07	□□□□□ -0.8
MSR1-211	ENST00000520846	PRICKLE2	Q7Z3G6	844 aa		10.07	□□□□□ -0.8
MSR1-211	ENST00000520846	NXF1	Q9UBU9	619 aa	Known RBP	10.07	□□□□□ -0.8
MSR1-211	ENST00000520846	SCNN1D	P51172	638 aa		10.06	□□□□□ -0.8
MSR1-211	ENST00000520846	GDF10	P55107	478 aa		10.06	□□□□□ -0.8
MSR1-211	ENST00000520846	CENPC	Q03188	943 aa		10.06	□□□□□ -0.8
MSR1-211	ENST00000520846	PSME1	Q06323	249 aa		10.06	□□□□□ -0.8
MSR1-211	ENST00000520846	GRIP2	Q9C0E4	1043 aa		10.06	□□□□□ -0.8
MSR1-211	ENST00000520846	MKRN1	Q9UHC7	482 aa	Known RBP	10.06	□□□□□ -0.8
MSR1-211	ENST00000520846	HRH3	Q9Y5N1	445 aa		10.06	□□□□□ -0.8
MSR1-211	ENST00000520846	INHA	P05111	366 aa		10.05	□□□□□ -0.8
MSR1-211	ENST00000520846	PTS	Q03393	145 aa		10.05	□□□□□ -0.8
MSR1-211	ENST00000520846	WASL	O00401	505 aa	Predicted RBP	10.04	□□□□□ -0.8
MSR1-211	ENST00000520846	TERT	O14746	1132 aa	Known RBP	10.04	□□□□□ -0.8
MSR1-211	ENST00000520846	LMOD1	P29536	600 aa	Predicted RBP	10.04	□□□□□ -0.8
MSR1-211	ENST00000520846	ATP1A2	P50993	1020 aa		10.04	□□□□□ -0.8
MSR1-211	ENST00000520846	TMEM229A	B2RXF0	380 aa		10.03	□□□□□ -0.8
MSR1-211	ENST00000520846	NPAS3	Q8IXF0	933 aa		10.03	□□□□□ -0.8
MSR1-211	ENST00000520846	OGFOD1	Q8N543	542 aa		10.03	□□□□□ -0.8
MSR1-211	ENST00000520846	ARID3C	A6NKF2	412 aa		10.02	□□□□□ -0.81
MSR1-211	ENST00000520846	CLDN10	P78369	228 aa		10.02	□□□□□ -0.81
MSR1-211	ENST00000520846	CFAP70	Q5T0N1	1121 aa		10.02	□□□□□ -0.81
MSR1-211	ENST00000520846	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.02	□□□□□ -0.81
MSR1-211	ENST00000520846	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.02	□□□□□ -0.81
MSR1-211	ENST00000520846	DNAAF2	Q9NVR5	837 aa	Known RBP	10.02	□□□□□ -0.81
MSR1-211	ENST00000520846	ZBTB7B	O15156	539 aa	Predicted RBP	10.01	□□□□□ -0.81
MSR1-211	ENST00000520846	RHOQ	P17081	205 aa		10.01	□□□□□ -0.81
MSR1-211	ENST00000520846	GTF2E1	P29083	439 aa	Predicted RBP	10.01	□□□□□ -0.81
MSR1-211	ENST00000520846	VEGFB	P49765	207 aa		10.01	□□□□□ -0.81
MSR1-211	ENST00000520846	POU4F2	Q12837	409 aa		10.01	□□□□□ -0.81
MSR1-211	ENST00000520846	TLR1	Q15399	786 aa		10.01	□□□□□ -0.81
MSR1-211	ENST00000520846	LARGE2	Q8N3Y3	721 aa		10.01	□□□□□ -0.81
MSR1-211	ENST00000520846	SERTAD1	Q9UHV2	236 aa		10.01	□□□□□ -0.81
MSR1-211	ENST00000520846	SLC35F4	A4IF30	521 aa		10	□□□□□ -0.81
MSR1-211	ENST00000520846	SPATA31C2	B4DYI2	1134 aa		10	□□□□□ -0.81

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