RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-208ENST00000520776 SOS2Q07890 1332 aaPredicted RBP6.52□□□□□ -1.37
EFCAB13-208ENST00000520776 ACIN1Q9UKV3 1341 aaKnown RBP6.52□□□□□ -1.37
EFCAB13-208ENST00000520776 PALM3A6NDB9 673 aaPredicted RBP6.52□□□□□ -1.37
EFCAB13-208ENST00000520776 ESPNB1AK53 854 aa6.52□□□□□ -1.37
EFCAB13-208ENST00000520776 RFX1P22670 979 aa6.52□□□□□ -1.37
EFCAB13-208ENST00000520776 C6orf118Q5T5N4 469 aa6.52□□□□□ -1.37
EFCAB13-208ENST00000520776 TFIP11Q9UBB9 837 aaKnown RBP6.52□□□□□ -1.37
EFCAB13-208ENST00000520776 NR1H3Q13133 447 aa6.51□□□□□ -1.37
EFCAB13-208ENST00000520776 PBXIP1Q96AQ6 731 aa6.51□□□□□ -1.37
EFCAB13-208ENST00000520776 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.51□□□□□ -1.37
EFCAB13-208ENST00000520776 SPINT1O43278 529 aa6.51□□□□□ -1.37
EFCAB13-208ENST00000520776 FBXO45P0C2W1 286 aa6.51□□□□□ -1.37
EFCAB13-208ENST00000520776 VSIG8P0DPA2 414 aa6.51□□□□□ -1.37
EFCAB13-208ENST00000520776 SEMA3FQ13275 785 aa6.51□□□□□ -1.37
EFCAB13-208ENST00000520776 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.51□□□□□ -1.37
EFCAB13-208ENST00000520776 EIF4G2P78344 907 aaKnown RBP eCLIP6.5□□□□□ -1.37
EFCAB13-208ENST00000520776 STK17AQ9UEE5 414 aa6.5□□□□□ -1.37
EFCAB13-208ENST00000520776 RNF20Q5VTR2 975 aa6.49□□□□□ -1.37
EFCAB13-208ENST00000520776 TTLL8A6PVC2 850 aa6.49□□□□□ -1.37
EFCAB13-208ENST00000520776 LMOD1P29536 600 aaPredicted RBP6.49□□□□□ -1.37
EFCAB13-208ENST00000520776 TBC1D9Q6ZT07 1266 aa6.48□□□□□ -1.37
EFCAB13-208ENST00000520776 ADH1AP07327 375 aa6.48□□□□□ -1.37
EFCAB13-208ENST00000520776 DNMT3LQ9UJW3 386 aa6.48□□□□□ -1.37
EFCAB13-208ENST00000520776 ZBTB7CA1YPR0 619 aa6.47□□□□□ -1.37
EFCAB13-208ENST00000520776 CBLBQ13191 982 aa6.47□□□□□ -1.37
EFCAB13-208ENST00000520776 LCE2CQ5TA81 110 aa6.47□□□□□ -1.37
EFCAB13-208ENST00000520776 ZNF784Q8NCA9 323 aaPredicted RBP6.47□□□□□ -1.37
EFCAB13-208ENST00000520776 PCDHB9Q9Y5E1 797 aa6.47□□□□□ -1.37
EFCAB13-208ENST00000520776 MAFBQ9Y5Q3 323 aaPredicted RBP6.47□□□□□ -1.37
EFCAB13-208ENST00000520776 ERVH48-1M5A8F1 160 aa6.46□□□□□ -1.37
EFCAB13-208ENST00000520776 FAM181BA6NEQ2 426 aa6.46□□□□□ -1.38
EFCAB13-208ENST00000520776 ATP9BO43861 1147 aa6.46□□□□□ -1.38
EFCAB13-208ENST00000520776 CDCA8Q53HL2 280 aa6.46□□□□□ -1.38
EFCAB13-208ENST00000520776 KCTD17Q8N5Z5 321 aa6.46□□□□□ -1.38
EFCAB13-208ENST00000520776 SOBPA7XYQ1 873 aa6.45□□□□□ -1.38
EFCAB13-208ENST00000520776 PIK3CDO00329 1044 aa6.45□□□□□ -1.38
EFCAB13-208ENST00000520776 LILRA1O75019 489 aa6.45□□□□□ -1.38
EFCAB13-208ENST00000520776 PPFIA3O75145 1194 aa6.44□□□□□ -1.38
EFCAB13-208ENST00000520776 GMPRP36959 345 aa6.44□□□□□ -1.38
EFCAB13-208ENST00000520776 KANK4Q5T7N3 995 aaPredicted RBP6.44□□□□□ -1.38
EFCAB13-208ENST00000520776 AEBP1Q8IUX7 1158 aa6.44□□□□□ -1.38
EFCAB13-208ENST00000520776 ATG7O95352 703 aa6.44□□□□□ -1.38
EFCAB13-208ENST00000520776 PTGIRP43119 386 aa6.44□□□□□ -1.38
EFCAB13-208ENST00000520776 PDE4CQ08493 712 aa6.44□□□□□ -1.38
EFCAB13-208ENST00000520776 TMPRSS4Q9NRS4 437 aa6.44□□□□□ -1.38
EFCAB13-208ENST00000520776 CEP126Q9P2H0 1117 aa6.44□□□□□ -1.38
EFCAB13-208ENST00000520776 RELBQ01201 579 aa6.43□□□□□ -1.38
EFCAB13-208ENST00000520776 NFATC2IPQ8NCF5 419 aa6.43□□□□□ -1.38
EFCAB13-208ENST00000520776 ERBB4Q15303 1308 aa6.43□□□□□ -1.38
EFCAB13-208ENST00000520776 CARNS1A5YM72 827 aa6.42□□□□□ -1.38
EFCAB13-208ENST00000520776 VEGFBP49765 207 aa6.42□□□□□ -1.38
EFCAB13-208ENST00000520776 RAB15P59190 212 aa6.42□□□□□ -1.38
EFCAB13-208ENST00000520776 ERVK-9P63128 1117 aa6.42□□□□□ -1.38
EFCAB13-208ENST00000520776 PHTF2Q8N3S3 785 aa6.42□□□□□ -1.38
EFCAB13-208ENST00000520776 POLMQ9NP87 494 aaPredicted RBP6.42□□□□□ -1.38
EFCAB13-208ENST00000520776 GIGYF1O75420 1035 aaPredicted RBP6.42□□□□□ -1.38
EFCAB13-208ENST00000520776 GPC1P35052 558 aa6.42□□□□□ -1.38
EFCAB13-208ENST00000520776 PTSQ03393 145 aa6.42□□□□□ -1.38
EFCAB13-208ENST00000520776 CC2D2BQ6DHV5 1058 aa6.42□□□□□ -1.38
EFCAB13-208ENST00000520776 RNF217Q8TC41 542 aa6.42□□□□□ -1.38
EFCAB13-208ENST00000520776 NANOS1Q8WY41 292 aaKnown RBP6.42□□□□□ -1.38
EFCAB13-208ENST00000520776 AGBL1Q96MI9 1066 aa6.42□□□□□ -1.38
EFCAB13-208ENST00000520776 VRTNQ9H8Y1 702 aa6.42□□□□□ -1.38
EFCAB13-208ENST00000520776 USTQ9Y2C2 406 aa6.42□□□□□ -1.38
EFCAB13-208ENST00000520776 CSB-PGBD3P0DP91 1061 aa6.41□□□□□ -1.38
EFCAB13-208ENST00000520776 CYP2U1Q7Z449 544 aa6.41□□□□□ -1.38
EFCAB13-208ENST00000520776 ZSCAN1Q8NBB4 408 aa6.41□□□□□ -1.38
EFCAB13-208ENST00000520776 INSM2Q96T92 566 aaPredicted RBP6.41□□□□□ -1.38
EFCAB13-208ENST00000520776 SLC35F4A4IF30 521 aa6.4□□□□□ -1.38
EFCAB13-208ENST00000520776 TMEM88BA6NKF7 163 aa6.4□□□□□ -1.38
EFCAB13-208ENST00000520776 ATP5J2-PTCD1G3V325 749 aa6.4□□□□□ -1.38
EFCAB13-208ENST00000520776 SKIP12755 728 aa6.4□□□□□ -1.38
EFCAB13-208ENST00000520776 CTSOP43234 321 aaPredicted RBP6.4□□□□□ -1.38
EFCAB13-208ENST00000520776 CYLDQ9NQC7 956 aa6.4□□□□□ -1.38
EFCAB13-208ENST00000520776 ADD1P35611 737 aaKnown RBP6.4□□□□□ -1.39
EFCAB13-208ENST00000520776 RNF144AP50876 292 aaPredicted RBP6.4□□□□□ -1.39
EFCAB13-208ENST00000520776 PLEKHM2Q8IWE5 1019 aa6.4□□□□□ -1.39
EFCAB13-208ENST00000520776 CCDC155Q8N6L0 562 aa6.4□□□□□ -1.39
EFCAB13-208ENST00000520776 KDF1Q8NAX2 398 aaPredicted RBP6.39□□□□□ -1.39
EFCAB13-208ENST00000520776 CHIC2Q9UKJ5 165 aa6.39□□□□□ -1.39
EFCAB13-208ENST00000520776 USP17L3A6NCW0 530 aa6.38□□□□□ -1.39
EFCAB13-208ENST00000520776 USP17L4A6NCW7 530 aa6.38□□□□□ -1.39
EFCAB13-208ENST00000520776 FIGNL2A6NMB9 653 aa6.38□□□□□ -1.39
EFCAB13-208ENST00000520776 USP17L5A8MUK1 530 aa6.38□□□□□ -1.39
EFCAB13-208ENST00000520776 TSGA10IPQ3SY00 556 aa6.38□□□□□ -1.39
EFCAB13-208ENST00000520776 FOXD4L5Q5VV16 416 aaPredicted RBP6.38□□□□□ -1.39
EFCAB13-208ENST00000520776 USP17L2Q6R6M4 530 aa6.38□□□□□ -1.39
EFCAB13-208ENST00000520776 USP17L1Q7RTZ2 530 aa6.38□□□□□ -1.39
EFCAB13-208ENST00000520776 LYSMD3Q7Z3D4 306 aa6.38□□□□□ -1.39
EFCAB13-208ENST00000520776 ESF1Q9H501 851 aaKnown RBP6.38□□□□□ -1.39
EFCAB13-208ENST00000520776 ZNF395Q9H8N7 513 aaPredicted RBP6.38□□□□□ -1.39
EFCAB13-208ENST00000520776 BRD1O95696 1058 aa6.38□□□□□ -1.39
EFCAB13-208ENST00000520776 ELOAQ14241 798 aaKnown RBP6.38□□□□□ -1.39
EFCAB13-208ENST00000520776 DEPDC4Q8N2C3 294 aa6.38□□□□□ -1.39
EFCAB13-208ENST00000520776 GMCL1Q96IK5 515 aa6.38□□□□□ -1.39
EFCAB13-208ENST00000520776 ITGA6P23229 1130 aa6.37□□□□□ -1.39
EFCAB13-208ENST00000520776 SLFNL1Q499Z3 407 aa6.37□□□□□ -1.39
EFCAB13-208ENST00000520776 CLN3Q13286 438 aa6.37□□□□□ -1.39
EFCAB13-208ENST00000520776 RNF135Q8IUD6 432 aa6.37□□□□□ -1.39
EFCAB13-208ENST00000520776 MKRN1Q9UHC7 482 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms