RNA–Protein interactions for RNA: ENST00000520679.1

EXTL3-207, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 546 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-207ENST00000520679 SOS2Q07890 1332 aaPredicted RBP18.16■□□□□ 0.5
EXTL3-207ENST00000520679 MAP3K5Q99683 1374 aa18.16■□□□□ 0.5
EXTL3-207ENST00000520679 RTF1Q92541 710 aaKnown RBP18.15■□□□□ 0.5
EXTL3-207ENST00000520679 TSHZ2Q9NRE2 1034 aa18.15■□□□□ 0.5
EXTL3-207ENST00000520679 SLAIN2Q9P270 581 aa18.15■□□□□ 0.5
EXTL3-207ENST00000520679 IPO8O15397 1037 aaKnown RBP18.14■□□□□ 0.49
EXTL3-207ENST00000520679 KDM2BQ8NHM5 1336 aa18.14■□□□□ 0.49
EXTL3-207ENST00000520679 RGPD2P0DJD1 1756 aa18.14■□□□□ 0.49
EXTL3-207ENST00000520679 NBPF6Q5VWK0 638 aa18.13■□□□□ 0.49
EXTL3-207ENST00000520679 LMOD2Q6P5Q4 547 aa18.13■□□□□ 0.49
EXTL3-207ENST00000520679 ARHGAP45Q92619 1136 aa18.13■□□□□ 0.49
EXTL3-207ENST00000520679 NBPF4Q96M43 638 aa18.13■□□□□ 0.49
EXTL3-207ENST00000520679 LAS1LQ9Y4W2 734 aaKnown RBP18.13■□□□□ 0.49
EXTL3-207ENST00000520679 OVOS2A0A0G2JMS6 1433 aa18.13■□□□□ 0.49
EXTL3-207ENST00000520679 GNAT3A8MTJ3 354 aa18.12■□□□□ 0.49
EXTL3-207ENST00000520679 CENPQQ7L2Z9 268 aaPredicted RBP18.12■□□□□ 0.49
EXTL3-207ENST00000520679 ANKRD24Q8TF21 1146 aa18.12■□□□□ 0.49
EXTL3-207ENST00000520679 FRAT1Q92837 279 aaPredicted RBP18.12■□□□□ 0.49
EXTL3-207ENST00000520679 LTV1Q96GA3 475 aaPredicted RBP18.12■□□□□ 0.49
EXTL3-207ENST00000520679 SOS1Q07889 1333 aaPredicted RBP18.12■□□□□ 0.49
EXTL3-207ENST00000520679 DCTN1Q14203 1278 aa18.11■□□□□ 0.49
EXTL3-207ENST00000520679 TWISTNBQ3B726 338 aaPredicted RBP18.11■□□□□ 0.49
EXTL3-207ENST00000520679 AMOTQ4VCS5 1084 aa18.11■□□□□ 0.49
EXTL3-207ENST00000520679 ATF7IPQ6VMQ6 1270 aa18.11■□□□□ 0.49
EXTL3-207ENST00000520679 MCM10Q7L590 875 aa18.11■□□□□ 0.49
EXTL3-207ENST00000520679 DZIP1LQ8IYY4 767 aaKnown RBP18.11■□□□□ 0.49
EXTL3-207ENST00000520679 ERBB3P21860 1342 aa18.11■□□□□ 0.49
EXTL3-207ENST00000520679 RGPD5Q99666 1765 aa18.1■□□□□ 0.49
EXTL3-207ENST00000520679 CEMIPQ8WUJ3 1361 aa18.1■□□□□ 0.49
EXTL3-207ENST00000520679 MVPQ14764 893 aaKnown RBP18.1■□□□□ 0.49
EXTL3-207ENST00000520679 MRPL50Q8N5N7 158 aaKnown RBP18.1■□□□□ 0.49
EXTL3-207ENST00000520679 PANK1Q8TE04 598 aa18.1■□□□□ 0.49
EXTL3-207ENST00000520679 CLUAP1Q96AJ1 413 aa18.1■□□□□ 0.49
EXTL3-207ENST00000520679 BCL2L13Q9BXK5 485 aa18.1■□□□□ 0.49
EXTL3-207ENST00000520679 ABCA3Q99758 1704 aa18.09■□□□□ 0.49
EXTL3-207ENST00000520679 COG6Q9Y2V7 657 aa18.09■□□□□ 0.49
EXTL3-207ENST00000520679 ADAMTS7Q9UKP4 1686 aa18.09■□□□□ 0.49
EXTL3-207ENST00000520679 TOM1O60784 492 aa18.08■□□□□ 0.48
EXTL3-207ENST00000520679 RLBP1P12271 317 aa18.08■□□□□ 0.48
EXTL3-207ENST00000520679 TRIM27P14373 513 aa18.08■□□□□ 0.48
EXTL3-207ENST00000520679 PLEKHO1Q53GL0 409 aaPredicted RBP18.08■□□□□ 0.48
EXTL3-207ENST00000520679 DDX17Q92841 729 aaKnown RBP18.08■□□□□ 0.48
EXTL3-207ENST00000520679 NOB1Q9ULX3 412 aaKnown RBP18.08■□□□□ 0.48
EXTL3-207ENST00000520679 UBAP1LF5GYI3 381 aa18.07■□□□□ 0.48
EXTL3-207ENST00000520679 FTSJ3Q8IY81 847 aaKnown RBP18.07■□□□□ 0.48
EXTL3-207ENST00000520679 TSPYL6Q8N831 410 aa18.07■□□□□ 0.48
EXTL3-207ENST00000520679 C8orf58Q8NAV2 365 aa18.07■□□□□ 0.48
EXTL3-207ENST00000520679 AXIN2Q9Y2T1 843 aa18.07■□□□□ 0.48
EXTL3-207ENST00000520679 AKAP4Q5JQC9 854 aa18.06■□□□□ 0.48
EXTL3-207ENST00000520679 DDX19BQ9UMR2 479 aa18.06■□□□□ 0.48
EXTL3-207ENST00000520679 USHBP1Q8N6Y0 703 aa18.05■□□□□ 0.48
EXTL3-207ENST00000520679 LRRC59Q96AG4 307 aaKnown RBP18.05■□□□□ 0.48
EXTL3-207ENST00000520679 ZBTB7CA1YPR0 619 aa18.04■□□□□ 0.48
EXTL3-207ENST00000520679 TCERG1O14776 1098 aaKnown RBP18.04■□□□□ 0.48
EXTL3-207ENST00000520679 ZC3H6P61129 1189 aaKnown RBP18.04■□□□□ 0.48
EXTL3-207ENST00000520679 IL17REQ8NFR9 667 aa18.04■□□□□ 0.48
EXTL3-207ENST00000520679 CHMP4BQ9H444 224 aaKnown RBP18.04■□□□□ 0.48
EXTL3-207ENST00000520679 TSPYL4Q9UJ04 414 aa18.04■□□□□ 0.48
EXTL3-207ENST00000520679 AHDC1Q5TGY3 1603 aaPredicted RBP18.04■□□□□ 0.48
EXTL3-207ENST00000520679 TAF7Q15545 349 aaPredicted RBP18.03■□□□□ 0.48
EXTL3-207ENST00000520679 API5Q9BZZ5 524 aaKnown RBP18.03■□□□□ 0.48
EXTL3-207ENST00000520679 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.03■□□□□ 0.48
EXTL3-207ENST00000520679 TNNQ9UQP3 1299 aa18.03■□□□□ 0.48
EXTL3-207ENST00000520679 KDM3BQ7LBC6 1761 aa18.03■□□□□ 0.48
EXTL3-207ENST00000520679 CACNA1FO60840 1977 aa18.02■□□□□ 0.48
EXTL3-207ENST00000520679 ABCC4O15439 1325 aa18.02■□□□□ 0.48
EXTL3-207ENST00000520679 PKD1L3Q7Z443 1732 aa18.01■□□□□ 0.47
EXTL3-207ENST00000520679 VIRMAQ69YN4 1812 aaKnown RBP18■□□□□ 0.47
EXTL3-207ENST00000520679 ZNF530Q6P9A1 599 aaPredicted RBP18■□□□□ 0.47
EXTL3-207ENST00000520679 COL22A1Q8NFW1 1626 aaPredicted RBP18■□□□□ 0.47
EXTL3-207ENST00000520679 PTPRCP08575 1304 aa17.99■□□□□ 0.47
EXTL3-207ENST00000520679 SIPA1L3O60292 1781 aaPredicted RBP17.99■□□□□ 0.47
EXTL3-207ENST00000520679 CHMP4AQ9BY43 222 aa17.99■□□□□ 0.47
EXTL3-207ENST00000520679 HOXB7P09629 217 aa17.98■□□□□ 0.47
EXTL3-207ENST00000520679 C1orf141Q5JVX7 400 aa17.98■□□□□ 0.47
EXTL3-207ENST00000520679 TMEM57Q8N5G2 664 aa17.98■□□□□ 0.47
EXTL3-207ENST00000520679 CABLES1Q8TDN4 633 aa17.98■□□□□ 0.47
EXTL3-207ENST00000520679 ROBO1Q9Y6N7 1651 aa17.97■□□□□ 0.47
EXTL3-207ENST00000520679 ELL2O00472 640 aaPredicted RBP17.97■□□□□ 0.47
EXTL3-207ENST00000520679 ITPRIPQ8IWB1 547 aa17.97■□□□□ 0.47
EXTL3-207ENST00000520679 RAPGEF4Q8WZA2 1011 aa17.97■□□□□ 0.47
EXTL3-207ENST00000520679 PARP4Q9UKK3 1724 aaKnown RBP17.97■□□□□ 0.47
EXTL3-207ENST00000520679 COL5A2P05997 1499 aaPredicted RBP17.96■□□□□ 0.47
EXTL3-207ENST00000520679 TATP17735 454 aaPredicted RBP17.96■□□□□ 0.47
EXTL3-207ENST00000520679 RWDD1Q9H446 243 aaPredicted RBP17.96■□□□□ 0.47
EXTL3-207ENST00000520679 ZBTB40Q9NUA8 1239 aa17.96■□□□□ 0.47
EXTL3-207ENST00000520679 MEGF6O75095 1541 aa17.96■□□□□ 0.47
EXTL3-207ENST00000520679 SCN11AQ9UI33 1791 aa17.96■□□□□ 0.47
EXTL3-207ENST00000520679 RGS12O14924 1447 aa17.96■□□□□ 0.47
EXTL3-207ENST00000520679 RNMTO43148 476 aaKnown RBP17.95■□□□□ 0.46
EXTL3-207ENST00000520679 HDAC1Q13547 482 aaPredicted RBP17.95■□□□□ 0.46
EXTL3-207ENST00000520679 NLRP2Q9NX02 1062 aa17.95■□□□□ 0.46
EXTL3-207ENST00000520679 SPG7Q9UQ90 795 aa17.95■□□□□ 0.46
EXTL3-207ENST00000520679 PCDHB15Q9Y5E8 787 aa17.95■□□□□ 0.46
EXTL3-207ENST00000520679 WDR17Q8IZU2 1322 aa17.95■□□□□ 0.46
EXTL3-207ENST00000520679 MRC1P22897 1456 aa17.95■□□□□ 0.46
EXTL3-207ENST00000520679 IGHDP01880 384 aa17.94■□□□□ 0.46
EXTL3-207ENST00000520679 KRT24Q2M2I5 525 aa17.94■□□□□ 0.46
EXTL3-207ENST00000520679 PRDM11Q9NQV5 511 aa17.94■□□□□ 0.46
EXTL3-207ENST00000520679 RBM19Q9Y4C8 960 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms