RNA–Protein interactions for RNA: ENST00000520560.5

RBM12B-205, Transcript of RNA binding motif protein 12B, human

TSL 2

Gene RBM12B, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM12B-205	ENST00000520560	NUDC	Q9Y266	331 aa		13.71	□□□□□ -0.21
RBM12B-205	ENST00000520560	MEGF6	O75095	1541 aa		13.7	□□□□□ -0.22
RBM12B-205	ENST00000520560	U2SURP	O15042	1029 aa	Known RBP	13.7	□□□□□ -0.22
RBM12B-205	ENST00000520560	MARCH10	Q8NA82	808 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM12B-205	ENST00000520560	LRRC37A3	O60309	1634 aa		13.7	□□□□□ -0.22
RBM12B-205	ENST00000520560	KAT6B	Q8WYB5	2073 aa		13.69	□□□□□ -0.22
RBM12B-205	ENST00000520560	HMOX1	P09601	288 aa		13.69	□□□□□ -0.22
RBM12B-205	ENST00000520560	OVOS2	A0A0G2JMS6	1433 aa		13.69	□□□□□ -0.22
RBM12B-205	ENST00000520560	KDR	P35968	1356 aa		13.69	□□□□□ -0.22
RBM12B-205	ENST00000520560	FAM196A	Q6ZSG2	479 aa		13.68	□□□□□ -0.22
RBM12B-205	ENST00000520560	DDX54	Q8TDD1	881 aa	Known RBP	13.68	□□□□□ -0.22
RBM12B-205	ENST00000520560	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.68	□□□□□ -0.22	9e-7	■□□□□ 8.6
RBM12B-205	ENST00000520560	TNS2	Q63HR2	1409 aa		13.67	□□□□□ -0.22
RBM12B-205	ENST00000520560	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM12B-205	ENST00000520560	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
RBM12B-205	ENST00000520560	SPG7	Q9UQ90	795 aa		13.67	□□□□□ -0.22
RBM12B-205	ENST00000520560	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM12B-205	ENST00000520560	CYP27B1	O15528	508 aa		13.65	□□□□□ -0.22
RBM12B-205	ENST00000520560	FCHSD2	O94868	740 aa		13.65	□□□□□ -0.22
RBM12B-205	ENST00000520560	AMOT	Q4VCS5	1084 aa		13.65	□□□□□ -0.22
RBM12B-205	ENST00000520560	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
RBM12B-205	ENST00000520560	PLEKHG2	Q9H7P9	1386 aa		13.65	□□□□□ -0.22
RBM12B-205	ENST00000520560	SHANK3	Q9BYB0	1731 aa		13.64	□□□□□ -0.23
RBM12B-205	ENST00000520560	CCDC184	Q52MB2	194 aa		13.64	□□□□□ -0.23
RBM12B-205	ENST00000520560	RSPH6A	Q9H0K4	717 aa		13.64	□□□□□ -0.23
RBM12B-205	ENST00000520560	PKD1L3	Q7Z443	1732 aa		13.64	□□□□□ -0.23
RBM12B-205	ENST00000520560	BCL9	O00512	1426 aa		13.64	□□□□□ -0.23
RBM12B-205	ENST00000520560	PCDH11X	Q9BZA7	1347 aa		13.64	□□□□□ -0.23
RBM12B-205	ENST00000520560	PCDH11Y	Q9BZA8	1340 aa		13.64	□□□□□ -0.23
RBM12B-205	ENST00000520560	DIEXF	Q68CQ4	756 aa	Known RBP	13.63	□□□□□ -0.23
RBM12B-205	ENST00000520560	CCDC125	Q86Z20	511 aa		13.63	□□□□□ -0.23
RBM12B-205	ENST00000520560	SBF2	Q86WG5	1849 aa		13.62	□□□□□ -0.23
RBM12B-205	ENST00000520560	TRIM37	O94972	964 aa		13.62	□□□□□ -0.23
RBM12B-205	ENST00000520560	PRKAR2B	P31323	418 aa		13.62	□□□□□ -0.23
RBM12B-205	ENST00000520560	NKX1-1	Q15270	411 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM12B-205	ENST00000520560	IFNL2	Q8IZJ0	200 aa		13.62	□□□□□ -0.23
RBM12B-205	ENST00000520560	PHACTR3	Q96KR7	559 aa		13.62	□□□□□ -0.23
RBM12B-205	ENST00000520560	PHKG2	P15735	406 aa		13.61	□□□□□ -0.23
RBM12B-205	ENST00000520560	MTHFSD	Q2M296	383 aa	Known RBP	13.61	□□□□□ -0.23
RBM12B-205	ENST00000520560	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM12B-205	ENST00000520560	KCNQ2	O43526	872 aa		13.6	□□□□□ -0.23
RBM12B-205	ENST00000520560	PTF1A	Q7RTS3	328 aa		13.6	□□□□□ -0.23
RBM12B-205	ENST00000520560	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM12B-205	ENST00000520560	ADAMTS8	Q9UP79	889 aa		13.6	□□□□□ -0.23
RBM12B-205	ENST00000520560	PRIM1	P49642	420 aa	Known RBP	13.59	□□□□□ -0.23
RBM12B-205	ENST00000520560	WDR43	Q15061	677 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
RBM12B-205	ENST00000520560	ACSBG1	Q96GR2	724 aa		13.59	□□□□□ -0.23
RBM12B-205	ENST00000520560	PLEKHF1	Q96S99	279 aa		13.59	□□□□□ -0.23
RBM12B-205	ENST00000520560	PNN	Q9H307	717 aa	Known RBP	13.59	□□□□□ -0.23
RBM12B-205	ENST00000520560	MRS2	Q9HD23	443 aa		13.59	□□□□□ -0.23
RBM12B-205	ENST00000520560	HSP90AB1	P08238	724 aa	Known RBP	13.58	□□□□□ -0.24
RBM12B-205	ENST00000520560	AKAP4	Q5JQC9	854 aa		13.58	□□□□□ -0.24
RBM12B-205	ENST00000520560	C1orf141	Q5JVX7	400 aa		13.58	□□□□□ -0.24
RBM12B-205	ENST00000520560	PNISR	Q8TF01	805 aa	Known RBP	13.58	□□□□□ -0.24
RBM12B-205	ENST00000520560	SF3B2	Q13435	895 aa	Known RBP	13.57	□□□□□ -0.24
RBM12B-205	ENST00000520560	GAS2L2	Q8NHY3	880 aa		13.57	□□□□□ -0.24
RBM12B-205	ENST00000520560	DCAF5	Q96JK2	942 aa		13.57	□□□□□ -0.24
RBM12B-205	ENST00000520560	APBA3	O96018	575 aa		13.56	□□□□□ -0.24
RBM12B-205	ENST00000520560	NEFM	P07197	916 aa		13.56	□□□□□ -0.24
RBM12B-205	ENST00000520560	MPRIP	Q6WCQ1	1025 aa		13.56	□□□□□ -0.24
RBM12B-205	ENST00000520560	SYTL4	Q96C24	671 aa	Predicted RBP	13.56	□□□□□ -0.24
RBM12B-205	ENST00000520560	GNAT3	A8MTJ3	354 aa		13.55	□□□□□ -0.24
RBM12B-205	ENST00000520560	ERVV-2	B6SEH9	535 aa		13.55	□□□□□ -0.24
RBM12B-205	ENST00000520560	LGR6	Q9HBX8	967 aa		13.55	□□□□□ -0.24
RBM12B-205	ENST00000520560	ITGB4	P16144	1822 aa		13.55	□□□□□ -0.24
RBM12B-205	ENST00000520560	NHS	Q6T4R5	1651 aa		13.54	□□□□□ -0.24
RBM12B-205	ENST00000520560	DOT1L	Q8TEK3	1739 aa		13.54	□□□□□ -0.24
RBM12B-205	ENST00000520560	TNS1	Q9HBL0	1735 aa	Known RBP	13.54	□□□□□ -0.24
RBM12B-205	ENST00000520560	DEFB132	Q7Z7B7	95 aa		13.54	□□□□□ -0.24
RBM12B-205	ENST00000520560	CCDC146	Q8IYE0	955 aa		13.54	□□□□□ -0.24
RBM12B-205	ENST00000520560	CCER2	I3L3R5	266 aa		13.53	□□□□□ -0.24
RBM12B-205	ENST00000520560	RNMT	O43148	476 aa	Known RBP	13.53	□□□□□ -0.24
RBM12B-205	ENST00000520560	BAG6	P46379	1132 aa		13.53	□□□□□ -0.24
RBM12B-205	ENST00000520560	EN1	Q05925	392 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM12B-205	ENST00000520560	MIER1	Q8N108	512 aa		13.53	□□□□□ -0.24
RBM12B-205	ENST00000520560	IL17RE	Q8NFR9	667 aa		13.53	□□□□□ -0.24
RBM12B-205	ENST00000520560	PIGB	Q92521	554 aa		13.53	□□□□□ -0.24
RBM12B-205	ENST00000520560	RUNDC1	Q96C34	613 aa		13.53	□□□□□ -0.24
RBM12B-205	ENST00000520560	MAPK8IP3	Q9UPT6	1336 aa		13.53	□□□□□ -0.24
RBM12B-205	ENST00000520560	KDM6A	O15550	1401 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM12B-205	ENST00000520560	TOGARAM1	Q9Y4F4	1720 aa		13.53	□□□□□ -0.24
RBM12B-205	ENST00000520560	SCN11A	Q9UI33	1791 aa		13.53	□□□□□ -0.24
RBM12B-205	ENST00000520560	PLSCR1	O15162	318 aa		13.52	□□□□□ -0.25
RBM12B-205	ENST00000520560	CABP4	P57796	275 aa		13.52	□□□□□ -0.25
RBM12B-205	ENST00000520560	NFE2L2	Q16236	605 aa		13.52	□□□□□ -0.25
RBM12B-205	ENST00000520560	CAMKK2	Q96RR4	588 aa		13.52	□□□□□ -0.25
RBM12B-205	ENST00000520560	TMOD3	Q9NYL9	352 aa		13.52	□□□□□ -0.25
RBM12B-205	ENST00000520560	MAP3K5	Q99683	1374 aa		13.52	□□□□□ -0.25
RBM12B-205	ENST00000520560	BTAF1	O14981	1849 aa		13.52	□□□□□ -0.25
RBM12B-205	ENST00000520560	VIRMA	Q69YN4	1812 aa	Known RBP	13.52	□□□□□ -0.25
RBM12B-205	ENST00000520560	HTATSF1	O43719	755 aa	Known RBP	13.51	□□□□□ -0.25
RBM12B-205	ENST00000520560	NFATC2IP	Q8NCF5	419 aa		13.51	□□□□□ -0.25
RBM12B-205	ENST00000520560	DLG5	Q8TDM6	1919 aa		13.51	□□□□□ -0.25
RBM12B-205	ENST00000520560	TMPO	P42166	694 aa	Known RBP	13.5	□□□□□ -0.25
RBM12B-205	ENST00000520560	EZH2	Q15910	746 aa	Known RBP	13.5	□□□□□ -0.25
RBM12B-205	ENST00000520560	PROM2	Q8N271	834 aa		13.5	□□□□□ -0.25
RBM12B-205	ENST00000520560	RIPK4	P57078	832 aa		13.49	□□□□□ -0.25
RBM12B-205	ENST00000520560	FAM9B	Q8IZU0	186 aa		13.49	□□□□□ -0.25
RBM12B-205	ENST00000520560	RTF1	Q92541	710 aa	Known RBP	13.49	□□□□□ -0.25
RBM12B-205	ENST00000520560	SLC52A2	Q9HAB3	445 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms