RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 AGERQ15109 404 aa6.81□□□□□ -1.32
HMGB1P41-201ENST00000520234 MKL2Q9ULH7 1088 aa6.81□□□□□ -1.32
HMGB1P41-201ENST00000520234 C4orf48Q5BLP8 95 aa6.8□□□□□ -1.32
HMGB1P41-201ENST00000520234 TSC1Q92574 1164 aa6.8□□□□□ -1.32
HMGB1P41-201ENST00000520234 ACDQ96AP0 544 aa6.8□□□□□ -1.32
HMGB1P41-201ENST00000520234 SCO2A0A1W2PP80 73 aa6.79□□□□□ -1.32
HMGB1P41-201ENST00000520234 USP17L8P0C7I0 530 aa6.79□□□□□ -1.32
HMGB1P41-201ENST00000520234 CTDSPL2Q05D32 466 aa6.79□□□□□ -1.32
HMGB1P41-201ENST00000520234 MCM6Q14566 821 aa6.79□□□□□ -1.32
HMGB1P41-201ENST00000520234 LYPD8Q6UX82 237 aa6.79□□□□□ -1.32
HMGB1P41-201ENST00000520234 GMCL1Q96IK5 515 aa6.79□□□□□ -1.32
HMGB1P41-201ENST00000520234 SEMA6BQ9H3T3 888 aa6.79□□□□□ -1.32
HMGB1P41-201ENST00000520234 PGPEP1Q9NXJ5 209 aa6.79□□□□□ -1.32
HMGB1P41-201ENST00000520234 COL8A1P27658 744 aa6.78□□□□□ -1.32
HMGB1P41-201ENST00000520234 CTSOP43234 321 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P41-201ENST00000520234 FOXR1Q6PIV2 292 aa6.78□□□□□ -1.32
HMGB1P41-201ENST00000520234 VASH1Q7L8A9 365 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P41-201ENST00000520234 RNF217Q8TC41 542 aa6.78□□□□□ -1.32
HMGB1P41-201ENST00000520234 C1QTNF2Q9BXJ5 285 aa6.78□□□□□ -1.32
HMGB1P41-201ENST00000520234 OIP5O43482 229 aa6.77□□□□□ -1.33
HMGB1P41-201ENST00000520234 SNRPNP63162 240 aaKnown RBP6.77□□□□□ -1.33
HMGB1P41-201ENST00000520234 PRM3Q9NNZ6 103 aa6.77□□□□□ -1.33
HMGB1P41-201ENST00000520234 CUEDC1Q9NWM3 386 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P41-201ENST00000520234 CBLBQ13191 982 aa6.76□□□□□ -1.33
HMGB1P41-201ENST00000520234 TRMT44Q8IYL2 757 aaKnown RBP6.76□□□□□ -1.33
HMGB1P41-201ENST00000520234 SNRKQ9NRH2 765 aa6.76□□□□□ -1.33
HMGB1P41-201ENST00000520234 C1QTNF9BB2RNN3 333 aa6.75□□□□□ -1.33
HMGB1P41-201ENST00000520234 PER1O15534 1290 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P41-201ENST00000520234 LCE1DQ5T752 114 aa6.75□□□□□ -1.33
HMGB1P41-201ENST00000520234 C14orf37Q86TY3 774 aa6.75□□□□□ -1.33
HMGB1P41-201ENST00000520234 MTMR14Q8NCE2 650 aa6.75□□□□□ -1.33
HMGB1P41-201ENST00000520234 ZNF837Q96EG3 531 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P41-201ENST00000520234 POLMQ9NP87 494 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P41-201ENST00000520234 ZFP64Q9NPA5 681 aa6.75□□□□□ -1.33
HMGB1P41-201ENST00000520234 NSFL1CQ9UNZ2 370 aaKnown RBP6.75□□□□□ -1.33
HMGB1P41-201ENST00000520234 UBTFP17480 764 aaKnown RBP6.74□□□□□ -1.33
HMGB1P41-201ENST00000520234 ARTNQ5T4W7 220 aa6.74□□□□□ -1.33
HMGB1P41-201ENST00000520234 PPP1R26Q5T8A7 1209 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P41-201ENST00000520234 TRIM22Q8IYM9 498 aa6.74□□□□□ -1.33
HMGB1P41-201ENST00000520234 PNMA1Q8ND90 353 aa6.74□□□□□ -1.33
HMGB1P41-201ENST00000520234 LRRN4Q8WUT4 740 aa6.74□□□□□ -1.33
HMGB1P41-201ENST00000520234 INSM2Q96T92 566 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P41-201ENST00000520234 RAD21O60216 631 aa6.73□□□□□ -1.33
HMGB1P41-201ENST00000520234 F12P00748 615 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P41-201ENST00000520234 GRIN2CQ14957 1233 aa6.72□□□□□ -1.33
HMGB1P41-201ENST00000520234 NBPF11Q86T75 865 aa6.72□□□□□ -1.33
HMGB1P41-201ENST00000520234 CD163Q86VB7 1156 aa6.72□□□□□ -1.33
HMGB1P41-201ENST00000520234 GJD4Q96KN9 370 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P41-201ENST00000520234 HMX1Q9NP08 348 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P41-201ENST00000520234 MAP10Q9P2G4 905 aa6.72□□□□□ -1.33
HMGB1P41-201ENST00000520234 NDUFB9Q9Y6M9 179 aa6.72□□□□□ -1.33
HMGB1P41-201ENST00000520234 GPR25O00155 361 aa6.71□□□□□ -1.34
HMGB1P41-201ENST00000520234 PIK3R2O00459 728 aa6.71□□□□□ -1.34
HMGB1P41-201ENST00000520234 ARMC2Q8NEN0 867 aa6.71□□□□□ -1.34
HMGB1P41-201ENST00000520234 TRIM34Q9BYJ4 488 aa6.71□□□□□ -1.34
HMGB1P41-201ENST00000520234 ZMYND15Q9H091 742 aa6.71□□□□□ -1.34
HMGB1P41-201ENST00000520234 A6NJR5 290 aa6.7□□□□□ -1.34
HMGB1P41-201ENST00000520234 RELBQ01201 579 aa6.7□□□□□ -1.34
HMGB1P41-201ENST00000520234 NR6A1Q15406 480 aa6.7□□□□□ -1.34
HMGB1P41-201ENST00000520234 ZC3H4Q9UPT8 1303 aaKnown RBP6.7□□□□□ -1.34
HMGB1P41-201ENST00000520234 MX2P20592 715 aa6.69□□□□□ -1.34
HMGB1P41-201ENST00000520234 DOC2BQ14184 412 aa6.69□□□□□ -1.34
HMGB1P41-201ENST00000520234 FOXD4L6Q3SYB3 417 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P41-201ENST00000520234 FOXD4L3Q6VB84 417 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P41-201ENST00000520234 WWC1Q8IX03 1113 aa6.69□□□□□ -1.34
HMGB1P41-201ENST00000520234 AGBL1Q96MI9 1066 aa6.69□□□□□ -1.34
HMGB1P41-201ENST00000520234 TRERF1Q96PN7 1200 aa6.69□□□□□ -1.34
HMGB1P41-201ENST00000520234 OXCT2Q9BYC2 517 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P41-201ENST00000520234 TIMELESSQ9UNS1 1208 aa6.69□□□□□ -1.34
HMGB1P41-201ENST00000520234 COG6Q9Y2V7 657 aa6.69□□□□□ -1.34
HMGB1P41-201ENST00000520234 SHISA8B8ZZ34 492 aa6.68□□□□□ -1.34
HMGB1P41-201ENST00000520234 CHRNA4P43681 627 aa6.68□□□□□ -1.34
HMGB1P41-201ENST00000520234 GPKOWQ92917 476 aaPredicted RBP eCLIP6.68□□□□□ -1.34
HMGB1P41-201ENST00000520234 RRAGCQ9HB90 399 aa6.68□□□□□ -1.34
HMGB1P41-201ENST00000520234 FKBPLQ9UIM3 349 aa6.68□□□□□ -1.34
HMGB1P41-201ENST00000520234 MAP2K3P46734 347 aa6.67□□□□□ -1.34
HMGB1P41-201ENST00000520234 DHX9Q08211 1270 aaKnown RBP6.67□□□□□ -1.34
HMGB1P41-201ENST00000520234 NBPF14Q5TI25 921 aa6.67□□□□□ -1.34
HMGB1P41-201ENST00000520234 FOXD4L5Q5VV16 416 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P41-201ENST00000520234 LYSMD3Q7Z3D4 306 aa6.67□□□□□ -1.34
HMGB1P41-201ENST00000520234 EPS8L1Q8TE68 723 aa6.67□□□□□ -1.34
HMGB1P41-201ENST00000520234 GDPD2Q9HCC8 539 aa6.67□□□□□ -1.34
HMGB1P41-201ENST00000520234 TBC1D2BQ9UPU7 963 aa6.67□□□□□ -1.34
HMGB1P41-201ENST00000520234 COBLO75128 1261 aa6.66□□□□□ -1.34
HMGB1P41-201ENST00000520234 CLUAP1Q96AJ1 413 aa6.66□□□□□ -1.34
HMGB1P41-201ENST00000520234 POM121Q96HA1 1249 aa6.66□□□□□ -1.34
HMGB1P41-201ENST00000520234 GPSM3Q9Y4H4 160 aa6.66□□□□□ -1.34
HMGB1P41-201ENST00000520234 H7C1W4 665 aa6.65□□□□□ -1.34
HMGB1P41-201ENST00000520234 GNB5O14775 395 aa6.65□□□□□ -1.34
HMGB1P41-201ENST00000520234 ABL2P42684 1182 aa6.65□□□□□ -1.34
HMGB1P41-201ENST00000520234 DBN1Q16643 649 aa6.65□□□□□ -1.34
HMGB1P41-201ENST00000520234 WASHC4Q2M389 1173 aa6.65□□□□□ -1.34
HMGB1P41-201ENST00000520234 PDXDC2PQ6P474 469 aa6.65□□□□□ -1.34
HMGB1P41-201ENST00000520234 LINC00114Q6XXX2 140 aa6.65□□□□□ -1.34
HMGB1P41-201ENST00000520234 SH3BP5LQ7L8J4 393 aa6.65□□□□□ -1.34
HMGB1P41-201ENST00000520234 PROSER2Q86WR7 435 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P41-201ENST00000520234 SUV39H2Q9H5I1 410 aa6.65□□□□□ -1.34
HMGB1P41-201ENST00000520234 FNBP4Q8N3X1 1017 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P41-201ENST00000520234 GTPBP3Q969Y2 492 aaKnown RBP6.64□□□□□ -1.35
HMGB1P41-201ENST00000520234 ZNF395Q9H8N7 513 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms