RNA–Protein interactions for RNA: ENST00000520199.5

CLK4-205, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-205ENST00000520199 DDX54Q8TDD1 881 aaKnown RBP21.67■■□□□ 1.06
CLK4-205ENST00000520199 LY75O60449 1722 aa21.66■■□□□ 1.06
CLK4-205ENST00000520199 NCAPD2Q15021 1401 aa21.66■■□□□ 1.06
CLK4-205ENST00000520199 FLT4P35916 1363 aa21.66■■□□□ 1.06
CLK4-205ENST00000520199 NBPF14Q5TI25 921 aa21.66■■□□□ 1.06
CLK4-205ENST00000520199 TUBGCP6Q96RT7 1819 aa21.65■■□□□ 1.06
CLK4-205ENST00000520199 LRRC4BQ9NT99 713 aa21.65■■□□□ 1.06
CLK4-205ENST00000520199 KIF24Q5T7B8 1368 aa21.64■■□□□ 1.06
CLK4-205ENST00000520199 PKD1L3Q7Z443 1732 aa21.64■■□□□ 1.06
CLK4-205ENST00000520199 TOGARAM1Q9Y4F4 1720 aa21.64■■□□□ 1.06
CLK4-205ENST00000520199 ZCRB1Q8TBF4 217 aaKnown RBP21.63■■□□□ 1.05
CLK4-205ENST00000520199 POLKQ9UBT6 870 aa21.63■■□□□ 1.05
CLK4-205ENST00000520199 ITGB4P16144 1822 aa21.63■■□□□ 1.05
CLK4-205ENST00000520199 POLR3GLQ9BT43 218 aa21.61■■□□□ 1.05
CLK4-205ENST00000520199 PANK3Q9H999 370 aa21.61■■□□□ 1.05
CLK4-205ENST00000520199 CGNL1Q0VF96 1302 aa21.6■■□□□ 1.05
CLK4-205ENST00000520199 PRIM1P49642 420 aaKnown RBP21.6■■□□□ 1.05
CLK4-205ENST00000520199 WASHC2AQ641Q2 1341 aa21.59■■□□□ 1.05
CLK4-205ENST00000520199 SLC15A2Q16348 729 aa21.59■■□□□ 1.05
CLK4-205ENST00000520199 ZNF827Q17R98 1081 aa21.59■■□□□ 1.05
CLK4-205ENST00000520199 QSER1Q2KHR3 1735 aa21.58■■□□□ 1.05
CLK4-205ENST00000520199 KCNQ4P56696 695 aa21.58■■□□□ 1.05
CLK4-205ENST00000520199 CYP27B1O15528 508 aa21.57■■□□□ 1.04
CLK4-205ENST00000520199 PTGER2P43116 358 aa21.57■■□□□ 1.04
CLK4-205ENST00000520199 EYA1Q99502 592 aa21.56■■□□□ 1.04
CLK4-205ENST00000520199 SMG6Q86US8 1419 aaKnown RBP21.55■■□□□ 1.04
CLK4-205ENST00000520199 COL24A1Q17RW2 1714 aa21.55■■□□□ 1.04
CLK4-205ENST00000520199 TAF1LQ8IZX4 1826 aa21.55■■□□□ 1.04
CLK4-205ENST00000520199 SPON1Q9HCB6 807 aa21.55■■□□□ 1.04
CLK4-205ENST00000520199 PPM1GO15355 546 aaPredicted RBP21.54■■□□□ 1.04
CLK4-205ENST00000520199 ZBTB7AO95365 584 aa21.54■■□□□ 1.04
CLK4-205ENST00000520199 TNNT2P45379 298 aaPredicted RBP21.54■■□□□ 1.04
CLK4-205ENST00000520199 AKT1S1Q96B36 256 aa21.54■■□□□ 1.04
CLK4-205ENST00000520199 SGIP1Q9BQI5 828 aa21.54■■□□□ 1.04
CLK4-205ENST00000520199 RAPGEF4Q8WZA2 1011 aa21.53■■□□□ 1.04
CLK4-205ENST00000520199 UTRNP46939 3433 aa21.52■■□□□ 1.04
CLK4-205ENST00000520199 EIF4A2Q14240 407 aaKnown RBP21.52■■□□□ 1.04
CLK4-205ENST00000520199 STK32BQ9NY57 414 aa21.52■■□□□ 1.04
CLK4-205ENST00000520199 KIF7Q2M1P5 1343 aa21.52■■□□□ 1.03
CLK4-205ENST00000520199 TATP17735 454 aaPredicted RBP21.51■■□□□ 1.03
CLK4-205ENST00000520199 SYTL4Q96C24 671 aaPredicted RBP21.5■■□□□ 1.03
CLK4-205ENST00000520199 ATF5Q9Y2D1 282 aaPredicted RBP21.5■■□□□ 1.03
CLK4-205ENST00000520199 AMER1Q5JTC6 1135 aaPredicted RBP21.48■■□□□ 1.03
CLK4-205ENST00000520199 C5P01031 1676 aa21.47■■□□□ 1.03
CLK4-205ENST00000520199 NKX1-1Q15270 411 aaPredicted RBP21.47■■□□□ 1.03
CLK4-205ENST00000520199 SLC27A3Q5K4L6 730 aa21.47■■□□□ 1.03
CLK4-205ENST00000520199 PCDH11XQ9BZA7 1347 aa21.47■■□□□ 1.03
CLK4-205ENST00000520199 PCDH11YQ9BZA8 1340 aa21.47■■□□□ 1.03
CLK4-205ENST00000520199 GOLGB1Q14789 3259 aaKnown RBP21.47■■□□□ 1.03
CLK4-205ENST00000520199 PER1O15534 1290 aaPredicted RBP21.46■■□□□ 1.03
CLK4-205ENST00000520199 PNPLA7Q6ZV29 1317 aa21.45■■□□□ 1.02
CLK4-205ENST00000520199 IGSF1Q8N6C5 1336 aa21.45■■□□□ 1.02
CLK4-205ENST00000520199 PIGBQ92521 554 aa21.42■■□□□ 1.02
CLK4-205ENST00000520199 MTFR1LQ9H019 292 aa21.42■■□□□ 1.02
CLK4-205ENST00000520199 AMIGO3Q86WK7 504 aa21.41■■□□□ 1.02
CLK4-205ENST00000520199 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.41■■□□□ 1.022e-8■■□□□ 11.4
CLK4-205ENST00000520199 UBR3Q6ZT12 1888 aa21.41■■□□□ 1.02
CLK4-205ENST00000520199 MPRIPQ6WCQ1 1025 aa21.4■■□□□ 1.02
CLK4-205ENST00000520199 AEBP1Q8IUX7 1158 aa21.4■■□□□ 1.02
CLK4-205ENST00000520199 CCNL1Q9UK58 526 aaPredicted RBP21.4■■□□□ 1.02
CLK4-205ENST00000520199 PHKG2P15735 406 aa21.39■■□□□ 1.01
CLK4-205ENST00000520199 MORC1Q86VD1 984 aa21.39■■□□□ 1.01
CLK4-205ENST00000520199 PPP1R1BQ9UD71 204 aaPredicted RBP21.39■■□□□ 1.01
CLK4-205ENST00000520199 PALLDQ8WX93 1383 aa21.38■■□□□ 1.01
CLK4-205ENST00000520199 VIRMAQ69YN4 1812 aaKnown RBP21.38■■□□□ 1.01
CLK4-205ENST00000520199 C4BP0C0L5 1744 aa21.38■■□□□ 1.01
CLK4-205ENST00000520199 FHDC1Q9C0D6 1143 aaPredicted RBP21.37■■□□□ 1.01
CLK4-205ENST00000520199 SPG7Q9UQ90 795 aa21.37■■□□□ 1.01
CLK4-205ENST00000520199 KNSTRNQ9Y448 316 aa21.37■■□□□ 1.01
CLK4-205ENST00000520199 IL13P35225 146 aa21.36■■□□□ 1.01
CLK4-205ENST00000520199 SMIM5Q71RC9 77 aa21.36■■□□□ 1.01
CLK4-205ENST00000520199 COL23A1Q86Y22 540 aaPredicted RBP21.36■■□□□ 1.01
CLK4-205ENST00000520199 SYT17Q9BSW7 474 aa21.35■■□□□ 1.01
CLK4-205ENST00000520199 ASAP1Q9ULH1 1129 aa21.35■■□□□ 1.01
CLK4-205ENST00000520199 KDM6AO15550 1401 aaPredicted RBP21.35■■□□□ 1.01
CLK4-205ENST00000520199 TFCP2L1Q9NZI6 479 aa21.34■■□□□ 1.01
CLK4-205ENST00000520199 IFNL2Q8IZJ0 200 aa21.33■■□□□ 1.01
CLK4-205ENST00000520199 KDRP35968 1356 aa21.33■■□□□ 1
CLK4-205ENST00000520199 PLEKHG2Q9H7P9 1386 aa21.33■■□□□ 1
CLK4-205ENST00000520199 SCN11AQ9UI33 1791 aa21.33■■□□□ 1
CLK4-205ENST00000520199 MYH14Q7Z406 1995 aaKnown RBP21.32■■□□□ 1
CLK4-205ENST00000520199 ARXQ96QS3 562 aa21.32■■□□□ 1
CLK4-205ENST00000520199 SLC16A10Q8TF71 515 aa21.31■■□□□ 1
CLK4-205ENST00000520199 SLC4A9Q96Q91 983 aa21.31■■□□□ 1
CLK4-205ENST00000520199 ATG3Q9NT62 314 aa21.31■■□□□ 1
CLK4-205ENST00000520199 MTHFSP49914 203 aa21.3■■□□□ 1
CLK4-205ENST00000520199 ITPK1Q13572 414 aa21.3■■□□□ 1
CLK4-205ENST00000520199 MAP3K5Q99683 1374 aa21.3■■□□□ 1
CLK4-205ENST00000520199 COL5A3P25940 1745 aaPredicted RBP21.29■■□□□ 1
CLK4-205ENST00000520199 ZNF831Q5JPB2 1677 aa21.29■■□□□ 1
CLK4-205ENST00000520199 COL3A1P02461 1466 aaPredicted RBP21.29■■□□□ 1
CLK4-205ENST00000520199 CC2D1BQ5T0F9 858 aaKnown RBP21.29■■□□□ 1
CLK4-205ENST00000520199 LINC00116Q8NCU8 138 aa21.29■■□□□ 1
CLK4-205ENST00000520199 LOC102724428A0A0B4J2F2 783 aa21.28■■□□□ 1
CLK4-205ENST00000520199 SIK1P57059 783 aa21.28■■□□□ 1
CLK4-205ENST00000520199 SULT6B1Q6IMI4 303 aa21.28■■□□□ 1
CLK4-205ENST00000520199 CHD4Q14839 1912 aa21.27■■□□□ 1
CLK4-205ENST00000520199 SMARCC1Q92922 1105 aaPredicted RBP21.27■■□□□ 1
CLK4-205ENST00000520199 TMOD3Q9NYL9 352 aa21.27■■□□□ 1
CLK4-205ENST00000520199 NPC1L1Q9UHC9 1359 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms