RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 PRIM1P49642 420 aaKnown RBP15.08■□□□□ 0
PVT1-208ENST00000519481 NBPF6Q5VWK0 638 aa15.08■□□□□ 0
PVT1-208ENST00000519481 NBPF4Q96M43 638 aa15.08■□□□□ 0
PVT1-208ENST00000519481 KIF24Q5T7B8 1368 aa15.08■□□□□ 0
PVT1-208ENST00000519481 PTGER2P43116 358 aa15.07■□□□□ 0
PVT1-208ENST00000519481 INSRP06213 1382 aa15.07■□□□□ 0
PVT1-208ENST00000519481 FLT4P35916 1363 aa15.07■□□□□ 0
PVT1-208ENST00000519481 USHBP1Q8N6Y0 703 aa15.06■□□□□ 0
PVT1-208ENST00000519481 LRRC4BQ9NT99 713 aa15.06■□□□□ 0
PVT1-208ENST00000519481 HMGB2P26583 209 aaKnown RBP15.05■□□□□ -0
PVT1-208ENST00000519481 HSP90AB2PQ58FF8 381 aa15.05■□□□□ -0
PVT1-208ENST00000519481 POLR3GLQ9BT43 218 aa15.05■□□□□ -0
PVT1-208ENST00000519481 NSD3Q9BZ95 1437 aa15.05■□□□□ -0
PVT1-208ENST00000519481 MEGF6O75095 1541 aa15.05■□□□□ -0
PVT1-208ENST00000519481 ZNF827Q17R98 1081 aa15.04■□□□□ -0
PVT1-208ENST00000519481 SLC16A10Q8TF71 515 aa15.04■□□□□ -0
PVT1-208ENST00000519481 ARXQ96QS3 562 aa15.04■□□□□ -0
PVT1-208ENST00000519481 CARD14Q9BXL6 1004 aa15.04■□□□□ -0
PVT1-208ENST00000519481 TFCP2L1Q9NZI6 479 aa15.04■□□□□ -0
PVT1-208ENST00000519481 KIF20BQ96Q89 1820 aa15.03■□□□□ -0
PVT1-208ENST00000519481 PCDH11XQ9BZA7 1347 aa15.03■□□□□ -0
PVT1-208ENST00000519481 PCDH11YQ9BZA8 1340 aa15.03■□□□□ -0
PVT1-208ENST00000519481 PPM1GO15355 546 aaPredicted RBP15.03■□□□□ -0
PVT1-208ENST00000519481 AKT1S1Q96B36 256 aa15.03■□□□□ -0
PVT1-208ENST00000519481 FHDC1Q9C0D6 1143 aaPredicted RBP15.03■□□□□ -0
PVT1-208ENST00000519481 RGPD2P0DJD1 1756 aa15.03■□□□□ -0
PVT1-208ENST00000519481 PAPPAQ13219 1627 aa15.03■□□□□ -0
PVT1-208ENST00000519481 POLD1P28340 1107 aa15.02■□□□□ -0
PVT1-208ENST00000519481 SYT17Q9BSW7 474 aa15.02■□□□□ -0
PVT1-208ENST00000519481 CCNL1Q9UK58 526 aaPredicted RBP15.02■□□□□ -0
PVT1-208ENST00000519481 MYOM1P52179 1685 aa15.01□□□□□ -0.01
PVT1-208ENST00000519481 SGIP1Q9BQI5 828 aa15.01□□□□□ -0.01
PVT1-208ENST00000519481 EMILIN1Q9Y6C2 1016 aa15.01□□□□□ -0.01
PVT1-208ENST00000519481 DOT1LQ8TEK3 1739 aa15□□□□□ -0.01
PVT1-208ENST00000519481 EIF4G2P78344 907 aaKnown RBP eCLIP15□□□□□ -0.016e-8■■■■□ 19.3
PVT1-208ENST00000519481 NSD2O96028 1365 aa14.99□□□□□ -0.01
PVT1-208ENST00000519481 KCNQ4P56696 695 aa14.99□□□□□ -0.01
PVT1-208ENST00000519481 PNPLA7Q6ZV29 1317 aa14.98□□□□□ -0.01
PVT1-208ENST00000519481 CCER1Q8TC90 406 aaPredicted RBP14.98□□□□□ -0.01
PVT1-208ENST00000519481 SPG7Q9UQ90 795 aa14.98□□□□□ -0.01
PVT1-208ENST00000519481 SHANK3Q9BYB0 1731 aa14.97□□□□□ -0.01
PVT1-208ENST00000519481 WASHC2AQ641Q2 1341 aa14.97□□□□□ -0.01
PVT1-208ENST00000519481 MPRIPQ6WCQ1 1025 aa14.97□□□□□ -0.01
PVT1-208ENST00000519481 KLHL34Q8N239 644 aa14.97□□□□□ -0.01
PVT1-208ENST00000519481 SMARCC1Q92922 1105 aaPredicted RBP14.96□□□□□ -0.01
PVT1-208ENST00000519481 MAP3K5Q99683 1374 aa14.96□□□□□ -0.02
PVT1-208ENST00000519481 LY75O60449 1722 aa14.95□□□□□ -0.02
PVT1-208ENST00000519481 CYP27B1O15528 508 aa14.95□□□□□ -0.02
PVT1-208ENST00000519481 HSPA5P11021 654 aaKnown RBP14.95□□□□□ -0.02
PVT1-208ENST00000519481 QSER1Q2KHR3 1735 aa14.95□□□□□ -0.02
PVT1-208ENST00000519481 TNNT2P45379 298 aaPredicted RBP14.94□□□□□ -0.02
PVT1-208ENST00000519481 FLAD1Q8NFF5 587 aa14.94□□□□□ -0.02
PVT1-208ENST00000519481 EYA1Q99502 592 aa14.94□□□□□ -0.02
PVT1-208ENST00000519481 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.94□□□□□ -0.027e-7■■■□□ 16.1
PVT1-208ENST00000519481 POLKQ9UBT6 870 aa14.94□□□□□ -0.02
PVT1-208ENST00000519481 PALLDQ8WX93 1383 aa14.94□□□□□ -0.02
PVT1-208ENST00000519481 GPR162Q16538 588 aa14.93□□□□□ -0.02
PVT1-208ENST00000519481 NKX1-1Q15270 411 aaPredicted RBP14.92□□□□□ -0.02
PVT1-208ENST00000519481 PANK3Q9H999 370 aa14.92□□□□□ -0.02
PVT1-208ENST00000519481 MAP2P11137 1827 aaKnown RBP14.92□□□□□ -0.02
PVT1-208ENST00000519481 NCAPD2Q15021 1401 aa14.92□□□□□ -0.02
PVT1-208ENST00000519481 COL23A1Q86Y22 540 aaPredicted RBP14.91□□□□□ -0.02
PVT1-208ENST00000519481 IFNL2Q8IZJ0 200 aa14.91□□□□□ -0.02
PVT1-208ENST00000519481 AK7Q96M32 723 aa14.91□□□□□ -0.02
PVT1-208ENST00000519481 TMOD3Q9NYL9 352 aa14.91□□□□□ -0.02
PVT1-208ENST00000519481 EIF4A2Q14240 407 aaKnown RBP14.9□□□□□ -0.02
PVT1-208ENST00000519481 PELP1Q8IZL8 1130 aaKnown RBP14.9□□□□□ -0.02
PVT1-208ENST00000519481 PKD1L3Q7Z443 1732 aa14.89□□□□□ -0.03
PVT1-208ENST00000519481 ANKRD26Q9UPS8 1709 aa14.89□□□□□ -0.03
PVT1-208ENST00000519481 PIGBQ92521 554 aa14.89□□□□□ -0.03
PVT1-208ENST00000519481 TUBGCP6Q96RT7 1819 aa14.88□□□□□ -0.03
PVT1-208ENST00000519481 PHKG2P15735 406 aa14.88□□□□□ -0.03
PVT1-208ENST00000519481 MORC1Q86VD1 984 aa14.88□□□□□ -0.03
PVT1-208ENST00000519481 PLEKHG2Q9H7P9 1386 aa14.87□□□□□ -0.03
PVT1-208ENST00000519481 HSP90AB1P08238 724 aaKnown RBP14.87□□□□□ -0.03
PVT1-208ENST00000519481 MSL1Q68DK7 614 aa14.87□□□□□ -0.03
PVT1-208ENST00000519481 KNSTRNQ9Y448 316 aa14.87□□□□□ -0.03
PVT1-208ENST00000519481 C5P01031 1676 aa14.87□□□□□ -0.03
PVT1-208ENST00000519481 LOC102724428A0A0B4J2F2 783 aa14.86□□□□□ -0.03
PVT1-208ENST00000519481 SIK1P57059 783 aa14.86□□□□□ -0.03
PVT1-208ENST00000519481 PLEKHO1Q53GL0 409 aaPredicted RBP14.86□□□□□ -0.03
PVT1-208ENST00000519481 ZNF784Q8NCA9 323 aaPredicted RBP14.86□□□□□ -0.03
PVT1-208ENST00000519481 COL24A1Q17RW2 1714 aa14.86□□□□□ -0.03
PVT1-208ENST00000519481 ITGB4P16144 1822 aa14.85□□□□□ -0.03
PVT1-208ENST00000519481 NLGN2Q8NFZ4 835 aa14.85□□□□□ -0.03
PVT1-208ENST00000519481 CHD4Q14839 1912 aa14.85□□□□□ -0.03
PVT1-208ENST00000519481 IGSF1Q8N6C5 1336 aa14.85□□□□□ -0.03
PVT1-208ENST00000519481 TOGARAM1Q9Y4F4 1720 aa14.84□□□□□ -0.03
PVT1-208ENST00000519481 GRIN3BO60391 1043 aa14.84□□□□□ -0.03
PVT1-208ENST00000519481 PHF14O94880 888 aa14.84□□□□□ -0.03
PVT1-208ENST00000519481 SSFA2P28290 1259 aa14.84□□□□□ -0.03
PVT1-208ENST00000519481 ATP6V1AP38606 617 aa14.84□□□□□ -0.03
PVT1-208ENST00000519481 AMOTQ4VCS5 1084 aa14.84□□□□□ -0.03
PVT1-208ENST00000519481 ASAP1Q9ULH1 1129 aa14.84□□□□□ -0.03
PVT1-208ENST00000519481 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.83□□□□□ -0.04
PVT1-208ENST00000519481 ERVV-2B6SEH9 535 aa14.83□□□□□ -0.04
PVT1-208ENST00000519481 DCAF5Q96JK2 942 aa14.83□□□□□ -0.04
PVT1-208ENST00000519481 CD2APQ9Y5K6 639 aa14.83□□□□□ -0.04
PVT1-208ENST00000519481 C4BP0C0L5 1744 aa14.83□□□□□ -0.04
PVT1-208ENST00000519481 TAF1LQ8IZX4 1826 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms