RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 ZBTB7CA1YPR0 619 aa9.62□□□□□ -0.87
MRPS28-205ENST00000519386 PDE3BQ13370 1112 aa9.62□□□□□ -0.87
MRPS28-205ENST00000519386 FNBP4Q8N3X1 1017 aaPredicted RBP9.62□□□□□ -0.87
MRPS28-205ENST00000519386 SLC39A7Q92504 469 aa9.62□□□□□ -0.87
MRPS28-205ENST00000519386 COG3Q96JB2 828 aa9.62□□□□□ -0.87
MRPS28-205ENST00000519386 TMEM106CQ9BVX2 250 aa9.62□□□□□ -0.87
MRPS28-205ENST00000519386 NWD2Q9ULI1 1742 aa9.62□□□□□ -0.87
MRPS28-205ENST00000519386 BCL9LQ86UU0 1499 aa9.61□□□□□ -0.87
MRPS28-205ENST00000519386 C7P10643 843 aa9.61□□□□□ -0.87
MRPS28-205ENST00000519386 LHX8Q68G74 356 aa9.61□□□□□ -0.87
MRPS28-205ENST00000519386 POTEAQ6S8J7 498 aa9.61□□□□□ -0.87
MRPS28-205ENST00000519386 KCNH5Q8NCM2 988 aa9.61□□□□□ -0.87
MRPS28-205ENST00000519386 USP21Q9UK80 565 aa9.61□□□□□ -0.87
MRPS28-205ENST00000519386 TRIM35Q9UPQ4 493 aa9.61□□□□□ -0.87
MRPS28-205ENST00000519386 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.61□□□□□ -0.87
MRPS28-205ENST00000519386 LMO7Q8WWI1 1683 aa9.61□□□□□ -0.87
MRPS28-205ENST00000519386 LTN1O94822 1766 aa9.6□□□□□ -0.87
MRPS28-205ENST00000519386 COL18A1P39060 1754 aa9.6□□□□□ -0.87
MRPS28-205ENST00000519386 CDK12Q9NYV4 1490 aaPredicted RBP9.6□□□□□ -0.87
MRPS28-205ENST00000519386 NRAPQ86VF7 1730 aa9.6□□□□□ -0.87
MRPS28-205ENST00000519386 FBLN1P23142 703 aa9.6□□□□□ -0.87
MRPS28-205ENST00000519386 WDR43Q15061 677 aaKnown RBP eCLIP9.6□□□□□ -0.87
MRPS28-205ENST00000519386 ZNF772Q68DY9 489 aaPredicted RBP9.6□□□□□ -0.87
MRPS28-205ENST00000519386 ARHGEF25Q86VW2 580 aa9.6□□□□□ -0.87
MRPS28-205ENST00000519386 BTG4Q9NY30 223 aa9.6□□□□□ -0.87
MRPS28-205ENST00000519386 METRNQ9UJH8 293 aa9.6□□□□□ -0.87
MRPS28-205ENST00000519386 CAMTA1Q9Y6Y1 1673 aa9.6□□□□□ -0.87
MRPS28-205ENST00000519386 RGPD5Q99666 1765 aa9.6□□□□□ -0.87
MRPS28-205ENST00000519386 ATRNO75882 1429 aa9.59□□□□□ -0.87
MRPS28-205ENST00000519386 MORC1Q86VD1 984 aa9.59□□□□□ -0.87
MRPS28-205ENST00000519386 UNC5CLQ8IV45 518 aa9.59□□□□□ -0.87
MRPS28-205ENST00000519386 AATKQ6ZMQ8 1374 aa9.59□□□□□ -0.87
MRPS28-205ENST00000519386 ERICH6BQ5W0A0 696 aa9.58□□□□□ -0.88
MRPS28-205ENST00000519386 CFAP53Q96M91 514 aa9.58□□□□□ -0.88
MRPS28-205ENST00000519386 QTRT2Q9H974 415 aaKnown RBP9.58□□□□□ -0.88
MRPS28-205ENST00000519386 MAP3K19Q56UN5 1328 aa9.57□□□□□ -0.88
MRPS28-205ENST00000519386 NEFLP07196 543 aa9.57□□□□□ -0.88
MRPS28-205ENST00000519386 TNNT2P45379 298 aaPredicted RBP9.57□□□□□ -0.88
MRPS28-205ENST00000519386 PSEN1P49768 467 aa9.57□□□□□ -0.88
MRPS28-205ENST00000519386 RRS1Q15050 365 aaKnown RBP9.57□□□□□ -0.88
MRPS28-205ENST00000519386 RNF25Q96BH1 459 aaPredicted RBP9.57□□□□□ -0.88
MRPS28-205ENST00000519386 STRN4Q9NRL3 753 aa9.57□□□□□ -0.88
MRPS28-205ENST00000519386 TRPC5Q9UL62 973 aaPredicted RBP9.57□□□□□ -0.88
MRPS28-205ENST00000519386 NUDCQ9Y266 331 aa9.57□□□□□ -0.88
MRPS28-205ENST00000519386 AXIN2Q9Y2T1 843 aa9.57□□□□□ -0.88
MRPS28-205ENST00000519386 ABCC6O95255 1503 aa9.56□□□□□ -0.88
MRPS28-205ENST00000519386 COL5A2P05997 1499 aaPredicted RBP9.56□□□□□ -0.88
MRPS28-205ENST00000519386 POTEFA5A3E0 1075 aa9.56□□□□□ -0.88
MRPS28-205ENST00000519386 POTEB2H3BUK9 544 aa9.56□□□□□ -0.88
MRPS28-205ENST00000519386 PDAP1Q13442 181 aaKnown RBP9.56□□□□□ -0.88
MRPS28-205ENST00000519386 CNGB1Q14028 1251 aaPredicted RBP9.56□□□□□ -0.88
MRPS28-205ENST00000519386 VPS72Q15906 364 aa9.56□□□□□ -0.88
MRPS28-205ENST00000519386 PEAK1Q9H792 1746 aa9.56□□□□□ -0.88
MRPS28-205ENST00000519386 GLI3P10071 1580 aa9.55□□□□□ -0.88
MRPS28-205ENST00000519386 AMPHP49418 695 aa9.55□□□□□ -0.88
MRPS28-205ENST00000519386 EVA1CP58658 441 aa9.55□□□□□ -0.88
MRPS28-205ENST00000519386 IER5LQ5T953 404 aa9.55□□□□□ -0.88
MRPS28-205ENST00000519386 LARP1Q6PKG0 1096 aaKnown RBP9.55□□□□□ -0.88
MRPS28-205ENST00000519386 CCDC9Q9Y3X0 531 aaKnown RBP9.55□□□□□ -0.88
MRPS28-205ENST00000519386 EMILIN1Q9Y6C2 1016 aa9.55□□□□□ -0.88
MRPS28-205ENST00000519386 RGPD1P0DJD0 1748 aa9.55□□□□□ -0.88
MRPS28-205ENST00000519386 RTL1A6NKG5 1358 aa9.54□□□□□ -0.88
MRPS28-205ENST00000519386 RXRBP28702 533 aa9.54□□□□□ -0.88
MRPS28-205ENST00000519386 HOXC9P31274 260 aa9.54□□□□□ -0.88
MRPS28-205ENST00000519386 RBM6P78332 1123 aaKnown RBP9.54□□□□□ -0.88
MRPS28-205ENST00000519386 ILDR2Q71H61 639 aa9.54□□□□□ -0.88
MRPS28-205ENST00000519386 IP6K1Q92551 441 aa9.54□□□□□ -0.88
MRPS28-205ENST00000519386 GJD4Q96KN9 370 aaPredicted RBP9.54□□□□□ -0.88
MRPS28-205ENST00000519386 ADAMTS8Q9UP79 889 aa9.54□□□□□ -0.88
MRPS28-205ENST00000519386 SPATA31A5Q5VU36 1347 aa9.54□□□□□ -0.88
MRPS28-205ENST00000519386 RNF123Q5XPI4 1314 aa9.54□□□□□ -0.88
MRPS28-205ENST00000519386 SPATA31A7Q8IWB4 1347 aa9.54□□□□□ -0.88
MRPS28-205ENST00000519386 ZNF521Q96K83 1311 aa9.54□□□□□ -0.88
MRPS28-205ENST00000519386 PPM1GO15355 546 aaPredicted RBP9.53□□□□□ -0.88
MRPS28-205ENST00000519386 ANKRD24Q8TF21 1146 aa9.53□□□□□ -0.88
MRPS28-205ENST00000519386 POLKQ9UBT6 870 aa9.53□□□□□ -0.88
MRPS28-205ENST00000519386 SUPT16HQ9Y5B9 1047 aaKnown RBP9.53□□□□□ -0.88
MRPS28-205ENST00000519386 ERBB3P21860 1342 aa9.53□□□□□ -0.88
MRPS28-205ENST00000519386 SPATA31A1Q5TZJ5 1347 aa9.53□□□□□ -0.88
MRPS28-205ENST00000519386 WDR17Q8IZU2 1322 aa9.53□□□□□ -0.88
MRPS28-205ENST00000519386 FLT4P35916 1363 aa9.52□□□□□ -0.88
MRPS28-205ENST00000519386 RIOK3O14730 519 aaKnown RBP9.52□□□□□ -0.89
MRPS28-205ENST00000519386 CSB-PGBD3P0DP91 1061 aa9.52□□□□□ -0.89
MRPS28-205ENST00000519386 MTHFSP49914 203 aa9.52□□□□□ -0.89
MRPS28-205ENST00000519386 CRB1P82279 1406 aa9.52□□□□□ -0.89
MRPS28-205ENST00000519386 LTV1Q96GA3 475 aaPredicted RBP9.52□□□□□ -0.89
MRPS28-205ENST00000519386 USP35Q9P2H5 1018 aa9.52□□□□□ -0.89
MRPS28-205ENST00000519386 COLQQ9Y215 455 aaPredicted RBP9.52□□□□□ -0.89
MRPS28-205ENST00000519386 RGPD2P0DJD1 1756 aa9.52□□□□□ -0.89
MRPS28-205ENST00000519386 KIF24Q5T7B8 1368 aa9.51□□□□□ -0.89
MRPS28-205ENST00000519386 DLG5Q8TDM6 1919 aa9.51□□□□□ -0.89
MRPS28-205ENST00000519386 RGS12O14924 1447 aa9.51□□□□□ -0.89
MRPS28-205ENST00000519386 HSP90AB2PQ58FF8 381 aa9.51□□□□□ -0.89
MRPS28-205ENST00000519386 TOM1L2Q6ZVM7 507 aa9.51□□□□□ -0.89
MRPS28-205ENST00000519386 ECM2O94769 699 aaPredicted RBP9.5□□□□□ -0.89
MRPS28-205ENST00000519386 FAM98CQ17RN3 349 aaKnown RBP9.5□□□□□ -0.89
MRPS28-205ENST00000519386 CCDC27Q2M243 656 aa9.5□□□□□ -0.89
MRPS28-205ENST00000519386 TCP11L2Q8N4U5 519 aa9.5□□□□□ -0.89
MRPS28-205ENST00000519386 PNNQ9H307 717 aaKnown RBP9.5□□□□□ -0.89
MRPS28-205ENST00000519386 NLRP2Q9NX02 1062 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms