RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 GTPBP3Q969Y2 492 aaKnown RBP7.89□□□□□ -1.15
ATP6V1C1-204ENST00000518959 NSFL1CQ9UNZ2 370 aaKnown RBP7.89□□□□□ -1.15
ATP6V1C1-204ENST00000518959 ZC3H4Q9UPT8 1303 aaKnown RBP7.88□□□□□ -1.15
ATP6V1C1-204ENST00000518959 H7C1W4 665 aa7.88□□□□□ -1.15
ATP6V1C1-204ENST00000518959 ADD1P35611 737 aaKnown RBP7.88□□□□□ -1.15
ATP6V1C1-204ENST00000518959 ADAM32Q8TC27 787 aa7.88□□□□□ -1.15
ATP6V1C1-204ENST00000518959 KRTAP4-8Q9BYQ9 185 aa7.88□□□□□ -1.15
ATP6V1C1-204ENST00000518959 ERVH48-1M5A8F1 160 aa7.87□□□□□ -1.15
ATP6V1C1-204ENST00000518959 LILRA1O75019 489 aa7.87□□□□□ -1.15
ATP6V1C1-204ENST00000518959 MX2P20592 715 aa7.87□□□□□ -1.15
ATP6V1C1-204ENST00000518959 DBN1Q16643 649 aa7.87□□□□□ -1.15
ATP6V1C1-204ENST00000518959 LRRN4Q8WUT4 740 aa7.87□□□□□ -1.15
ATP6V1C1-204ENST00000518959 GAS2L1Q99501 681 aaPredicted RBP7.87□□□□□ -1.15
ATP6V1C1-204ENST00000518959 POLR3EQ9NVU0 708 aa7.87□□□□□ -1.15
ATP6V1C1-204ENST00000518959 FURINP09958 794 aa7.86□□□□□ -1.15
ATP6V1C1-204ENST00000518959 RNF144AP50876 292 aaPredicted RBP7.86□□□□□ -1.15
ATP6V1C1-204ENST00000518959 NR6A1Q15406 480 aa7.86□□□□□ -1.15
ATP6V1C1-204ENST00000518959 DZIP3Q86Y13 1208 aaKnown RBP7.86□□□□□ -1.15
ATP6V1C1-204ENST00000518959 VSIG10Q8N0Z9 540 aa7.86□□□□□ -1.15
ATP6V1C1-204ENST00000518959 TRIM52Q96A61 297 aa7.86□□□□□ -1.15
ATP6V1C1-204ENST00000518959 AK7Q96M32 723 aa7.86□□□□□ -1.15
ATP6V1C1-204ENST00000518959 KDF1Q8NAX2 398 aaPredicted RBP7.85□□□□□ -1.15
ATP6V1C1-204ENST00000518959 PSMG3-AS1Q96PY0 264 aa7.85□□□□□ -1.15
ATP6V1C1-204ENST00000518959 CYLDQ9NQC7 956 aa7.85□□□□□ -1.15
ATP6V1C1-204ENST00000518959 LRRC4BQ9NT99 713 aa7.85□□□□□ -1.15
ATP6V1C1-204ENST00000518959 GPSM3Q9Y4H4 160 aa7.85□□□□□ -1.15
ATP6V1C1-204ENST00000518959 KRBA1A5PL33 1030 aa7.84□□□□□ -1.15
ATP6V1C1-204ENST00000518959 MEN1O00255 615 aa7.84□□□□□ -1.15
ATP6V1C1-204ENST00000518959 OIP5O43482 229 aa7.84□□□□□ -1.15
ATP6V1C1-204ENST00000518959 RSPH6AQ9H0K4 717 aa7.84□□□□□ -1.15
ATP6V1C1-204ENST00000518959 OCSTAMPQ9BR26 566 aa7.83□□□□□ -1.16
ATP6V1C1-204ENST00000518959 RRAGCQ9HB90 399 aa7.83□□□□□ -1.16
ATP6V1C1-204ENST00000518959 MKL2Q9ULH7 1088 aa7.83□□□□□ -1.16
ATP6V1C1-204ENST00000518959 DYRK1BQ9Y463 629 aa7.83□□□□□ -1.16
ATP6V1C1-204ENST00000518959 SNRPNP63162 240 aaKnown RBP7.82□□□□□ -1.16
ATP6V1C1-204ENST00000518959 SLC27A3Q5K4L6 730 aa7.82□□□□□ -1.16
ATP6V1C1-204ENST00000518959 PNMA1Q8ND90 353 aa7.82□□□□□ -1.16
ATP6V1C1-204ENST00000518959 OXCT2Q9BYC2 517 aaPredicted RBP7.82□□□□□ -1.16
ATP6V1C1-204ENST00000518959 ATP1B4Q9UN42 357 aaPredicted RBP7.82□□□□□ -1.16
ATP6V1C1-204ENST00000518959 ATP5J2-PTCD1G3V325 749 aa7.81□□□□□ -1.16
ATP6V1C1-204ENST00000518959 POU4F2Q12837 409 aa7.81□□□□□ -1.16
ATP6V1C1-204ENST00000518959 ALYREFQ86V81 257 aaKnown RBP7.81□□□□□ -1.16
ATP6V1C1-204ENST00000518959 GPC1P35052 558 aa7.8□□□□□ -1.16
ATP6V1C1-204ENST00000518959 MAP2K3P46734 347 aa7.8□□□□□ -1.16
ATP6V1C1-204ENST00000518959 PDE4DQ08499 809 aa7.8□□□□□ -1.16
ATP6V1C1-204ENST00000518959 NLRP3Q96P20 1036 aa7.8□□□□□ -1.16
ATP6V1C1-204ENST00000518959 GRIN2CQ14957 1233 aa7.79□□□□□ -1.16
ATP6V1C1-204ENST00000518959 NUCKS1Q9H1E3 243 aaKnown RBP7.79□□□□□ -1.16
ATP6V1C1-204ENST00000518959 PPP2R2DQ66LE6 453 aa7.78□□□□□ -1.16
ATP6V1C1-204ENST00000518959 A0A1W2PRU2 124 aa7.77□□□□□ -1.17
ATP6V1C1-204ENST00000518959 ESPNB1AK53 854 aa7.77□□□□□ -1.17
ATP6V1C1-204ENST00000518959 SEPT12Q8IYM1 358 aa7.77□□□□□ -1.17
ATP6V1C1-204ENST00000518959 SHISA8B8ZZ34 492 aa7.76□□□□□ -1.17
ATP6V1C1-204ENST00000518959 AP1G2O75843 785 aa7.76□□□□□ -1.17
ATP6V1C1-204ENST00000518959 AMPD1P23109 780 aa7.76□□□□□ -1.17
ATP6V1C1-204ENST00000518959 COL8A1P27658 744 aa7.76□□□□□ -1.17
ATP6V1C1-204ENST00000518959 NBPF10Q6P3W6 841 aaKnown RBP7.76□□□□□ -1.17
ATP6V1C1-204ENST00000518959 NBPF15Q8N660 670 aa7.76□□□□□ -1.17
ATP6V1C1-204ENST00000518959 TIMMDC1Q9NPL8 285 aa7.76□□□□□ -1.17
ATP6V1C1-204ENST00000518959 F11P03951 625 aa7.75□□□□□ -1.17
ATP6V1C1-204ENST00000518959 PHF24Q9UPV7 400 aa7.75□□□□□ -1.17
ATP6V1C1-204ENST00000518959 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.74□□□□□ -1.17
ATP6V1C1-204ENST00000518959 EDARADDQ8WWZ3 215 aa7.74□□□□□ -1.17
ATP6V1C1-204ENST00000518959 KLRG1Q96E93 195 aa7.74□□□□□ -1.17
ATP6V1C1-204ENST00000518959 KRTAP9-2Q9BYQ4 174 aa7.74□□□□□ -1.17
ATP6V1C1-204ENST00000518959 GDF2Q9UK05 429 aaPredicted RBP7.74□□□□□ -1.17
ATP6V1C1-204ENST00000518959 PIK3R2O00459 728 aa7.73□□□□□ -1.17
ATP6V1C1-204ENST00000518959 TAS1R3Q7RTX0 852 aa7.73□□□□□ -1.17
ATP6V1C1-204ENST00000518959 EPS8L1Q8TE68 723 aa7.73□□□□□ -1.17
ATP6V1C1-204ENST00000518959 CFHR5Q9BXR6 569 aa7.73□□□□□ -1.17
ATP6V1C1-204ENST00000518959 ESF1Q9H501 851 aaKnown RBP7.72□□□□□ -1.17
ATP6V1C1-204ENST00000518959 GPAMQ9HCL2 828 aa7.72□□□□□ -1.17
ATP6V1C1-204ENST00000518959 C1QTNF9BB2RNN3 333 aa7.71□□□□□ -1.18
ATP6V1C1-204ENST00000518959 WASLO00401 505 aaPredicted RBP7.71□□□□□ -1.18
ATP6V1C1-204ENST00000518959 WDR44Q5JSH3 913 aa7.71□□□□□ -1.18
ATP6V1C1-204ENST00000518959 C1orf229Q6ZS94 237 aaPredicted RBP7.71□□□□□ -1.18
ATP6V1C1-204ENST00000518959 GOLGA6L1Q8N7Z2 621 aa7.71□□□□□ -1.18
ATP6V1C1-204ENST00000518959 GRIP2Q9C0E4 1043 aa7.71□□□□□ -1.18
ATP6V1C1-204ENST00000518959 SUV39H2Q9H5I1 410 aa7.71□□□□□ -1.18
ATP6V1C1-204ENST00000518959 PCDHB9Q9Y5E1 797 aa7.71□□□□□ -1.18
ATP6V1C1-204ENST00000518959 KRTAP9-6A0A140TA67 174 aa7.7□□□□□ -1.18
ATP6V1C1-204ENST00000518959 GIGYF1O75420 1035 aaPredicted RBP7.7□□□□□ -1.18
ATP6V1C1-204ENST00000518959 CLN3Q13286 438 aa7.7□□□□□ -1.18
ATP6V1C1-204ENST00000518959 CC2D2BQ6DHV5 1058 aa7.7□□□□□ -1.18
ATP6V1C1-204ENST00000518959 SEMA6BQ9H3T3 888 aa7.7□□□□□ -1.18
ATP6V1C1-204ENST00000518959 SPATA31C2B4DYI2 1134 aa7.69□□□□□ -1.18
ATP6V1C1-204ENST00000518959 GNB5O14775 395 aa7.69□□□□□ -1.18
ATP6V1C1-204ENST00000518959 BMP4P12644 408 aa7.69□□□□□ -1.18
ATP6V1C1-204ENST00000518959 ZMYM1Q5SVZ6 1142 aa7.69□□□□□ -1.18
ATP6V1C1-204ENST00000518959 CYP2U1Q7Z449 544 aa7.69□□□□□ -1.18
ATP6V1C1-204ENST00000518959 CD163Q86VB7 1156 aa7.69□□□□□ -1.18
ATP6V1C1-204ENST00000518959 SKIV2LQ15477 1246 aaKnown RBP7.68□□□□□ -1.18
ATP6V1C1-204ENST00000518959 PROCA1Q8NCQ7 364 aaPredicted RBP7.68□□□□□ -1.18
ATP6V1C1-204ENST00000518959 HMX1Q9NP08 348 aaPredicted RBP7.68□□□□□ -1.18
ATP6V1C1-204ENST00000518959 CSB-PGBD3P0DP91 1061 aa7.67□□□□□ -1.18
ATP6V1C1-204ENST00000518959 ERVK-9P63128 1117 aa7.67□□□□□ -1.18
ATP6V1C1-204ENST00000518959 FBXO31Q5XUX0 539 aaPredicted RBP7.67□□□□□ -1.18
ATP6V1C1-204ENST00000518959 LINC00114Q6XXX2 140 aa7.67□□□□□ -1.18
ATP6V1C1-204ENST00000518959 CCDC125Q86Z20 511 aa7.67□□□□□ -1.18
ATP6V1C1-204ENST00000518959 PGBD3Q8N328 593 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms