RNA–Protein interactions for RNA: ENST00000518916.5

MSC-AS1-204, MSC antisense RNA 1, humanhuman

TSL 3 BASIC

Gene MSC-AS1, Length 864 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-204ENST00000518916 EVA1CP58658 441 aa19.35■□□□□ 0.69
MSC-AS1-204ENST00000518916 CCDC27Q2M243 656 aa19.35■□□□□ 0.69
MSC-AS1-204ENST00000518916 NRAPQ86VF7 1730 aa19.34■□□□□ 0.69
MSC-AS1-204ENST00000518916 PHACTR3Q96KR7 559 aa19.34■□□□□ 0.69
MSC-AS1-204ENST00000518916 GLI3P10071 1580 aa19.34■□□□□ 0.69
MSC-AS1-204ENST00000518916 DLG5Q8TDM6 1919 aa19.33■□□□□ 0.69
MSC-AS1-204ENST00000518916 RIPK4P57078 832 aa19.33■□□□□ 0.68
MSC-AS1-204ENST00000518916 TOM1L2Q6ZVM7 507 aa19.33■□□□□ 0.68
MSC-AS1-204ENST00000518916 GAS2L2Q8NHY3 880 aa19.33■□□□□ 0.68
MSC-AS1-204ENST00000518916 STRN4Q9NRL3 753 aa19.33■□□□□ 0.68
MSC-AS1-204ENST00000518916 BTG4Q9NY30 223 aa19.33■□□□□ 0.68
MSC-AS1-204ENST00000518916 PLEKHG2Q9H7P9 1386 aa19.32■□□□□ 0.68
MSC-AS1-204ENST00000518916 ZNF521Q96K83 1311 aa19.32■□□□□ 0.68
MSC-AS1-204ENST00000518916 PARP4Q9UKK3 1724 aaKnown RBP19.32■□□□□ 0.68
MSC-AS1-204ENST00000518916 WWC1Q8IX03 1113 aa19.32■□□□□ 0.68
MSC-AS1-204ENST00000518916 RAPGEF4Q8WZA2 1011 aa19.32■□□□□ 0.68
MSC-AS1-204ENST00000518916 UPF1Q92900 1129 aaKnown RBP eCLIP19.32■□□□□ 0.68
MSC-AS1-204ENST00000518916 GOLGA2Q08379 1002 aa19.31■□□□□ 0.68
MSC-AS1-204ENST00000518916 CRB1P82279 1406 aa19.31■□□□□ 0.68
MSC-AS1-204ENST00000518916 EP400Q96L91 3159 aa19.31■□□□□ 0.68
MSC-AS1-204ENST00000518916 TATP17735 454 aaPredicted RBP19.29■□□□□ 0.68
MSC-AS1-204ENST00000518916 CALD1Q05682 793 aaKnown RBP19.29■□□□□ 0.68
MSC-AS1-204ENST00000518916 WDR63Q8IWG1 891 aa19.29■□□□□ 0.68
MSC-AS1-204ENST00000518916 CARD10Q9BWT7 1032 aa19.29■□□□□ 0.68
MSC-AS1-204ENST00000518916 AMOTQ4VCS5 1084 aa19.28■□□□□ 0.68
MSC-AS1-204ENST00000518916 PLEKHO1Q53GL0 409 aaPredicted RBP19.28■□□□□ 0.68
MSC-AS1-204ENST00000518916 E9PSI1 815 aa19.27■□□□□ 0.68
MSC-AS1-204ENST00000518916 MTHFSDQ2M296 383 aaKnown RBP19.27■□□□□ 0.68
MSC-AS1-204ENST00000518916 LARP1Q6PKG0 1096 aaKnown RBP19.27■□□□□ 0.68
MSC-AS1-204ENST00000518916 RTF1Q92541 710 aaKnown RBP19.27■□□□□ 0.68
MSC-AS1-204ENST00000518916 MAP3K5Q99683 1374 aa19.27■□□□□ 0.68
MSC-AS1-204ENST00000518916 MEGF6O75095 1541 aa19.26■□□□□ 0.67
MSC-AS1-204ENST00000518916 PKD1L3Q7Z443 1732 aa19.26■□□□□ 0.67
MSC-AS1-204ENST00000518916 TRIM35Q9UPQ4 493 aa19.26■□□□□ 0.67
MSC-AS1-204ENST00000518916 IL16Q14005 1332 aa19.25■□□□□ 0.67
MSC-AS1-204ENST00000518916 SPATA31A5Q5VU36 1347 aa19.25■□□□□ 0.67
MSC-AS1-204ENST00000518916 SPATA31A7Q8IWB4 1347 aa19.25■□□□□ 0.67
MSC-AS1-204ENST00000518916 WNK3Q9BYP7 1800 aa19.24■□□□□ 0.67
MSC-AS1-204ENST00000518916 ZNF530Q6P9A1 599 aaPredicted RBP19.24■□□□□ 0.67
MSC-AS1-204ENST00000518916 CDCA7LQ96GN5 454 aa19.24■□□□□ 0.67
MSC-AS1-204ENST00000518916 MYH16Q9H6N6 1097 aa19.24■□□□□ 0.67
MSC-AS1-204ENST00000518916 SPG7Q9UQ90 795 aa19.24■□□□□ 0.67
MSC-AS1-204ENST00000518916 OVOS2A0A0G2JMS6 1433 aa19.24■□□□□ 0.67
MSC-AS1-204ENST00000518916 HTATSF1O43719 755 aaKnown RBP19.23■□□□□ 0.67
MSC-AS1-204ENST00000518916 C1orf141Q5JVX7 400 aa19.23■□□□□ 0.67
MSC-AS1-204ENST00000518916 LRRC37A3O60309 1634 aa19.22■□□□□ 0.67
MSC-AS1-204ENST00000518916 GNAT3A8MTJ3 354 aa19.22■□□□□ 0.67
MSC-AS1-204ENST00000518916 IL2RBP14784 551 aa19.22■□□□□ 0.67
MSC-AS1-204ENST00000518916 SLFN5Q08AF3 891 aa19.22■□□□□ 0.67
MSC-AS1-204ENST00000518916 SEPT12Q8IYM1 358 aa19.22■□□□□ 0.67
MSC-AS1-204ENST00000518916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.22■□□□□ 0.67
MSC-AS1-204ENST00000518916 BRWD3Q6RI45 1802 aa19.21■□□□□ 0.67
MSC-AS1-204ENST00000518916 CCDC125Q86Z20 511 aa19.21■□□□□ 0.67
MSC-AS1-204ENST00000518916 SPATA31A1Q5TZJ5 1347 aa19.21■□□□□ 0.67
MSC-AS1-204ENST00000518916 AKAP4Q5JQC9 854 aa19.2■□□□□ 0.66
MSC-AS1-204ENST00000518916 USP35Q9P2H5 1018 aa19.2■□□□□ 0.66
MSC-AS1-204ENST00000518916 CCDC9Q9Y3X0 531 aaKnown RBP19.19■□□□□ 0.66
MSC-AS1-204ENST00000518916 THSD7AQ9UPZ6 1657 aa19.18■□□□□ 0.66
MSC-AS1-204ENST00000518916 DUSP27Q5VZP5 1158 aa19.18■□□□□ 0.66
MSC-AS1-204ENST00000518916 THUMPD2Q9BTF0 503 aaKnown RBP19.18■□□□□ 0.66
MSC-AS1-204ENST00000518916 PCDH11XQ9BZA7 1347 aa19.18■□□□□ 0.66
MSC-AS1-204ENST00000518916 PCDH11YQ9BZA8 1340 aa19.18■□□□□ 0.66
MSC-AS1-204ENST00000518916 VIRMAQ69YN4 1812 aaKnown RBP19.17■□□□□ 0.66
MSC-AS1-204ENST00000518916 GNAI1P63096 354 aa19.17■□□□□ 0.66
MSC-AS1-204ENST00000518916 DCTN1Q14203 1278 aa19.17■□□□□ 0.66
MSC-AS1-204ENST00000518916 BARGINQ6ZT62 677 aa19.17■□□□□ 0.66
MSC-AS1-204ENST00000518916 MCM10Q7L590 875 aa19.17■□□□□ 0.66
MSC-AS1-204ENST00000518916 IFT57Q9NWB7 429 aa19.17■□□□□ 0.66
MSC-AS1-204ENST00000518916 THRAP3Q9Y2W1 955 aaKnown RBP19.17■□□□□ 0.66
MSC-AS1-204ENST00000518916 DISP2A7MBM2 1401 aa19.17■□□□□ 0.66
MSC-AS1-204ENST00000518916 TRMT2AQ8IZ69 625 aaKnown RBP19.16■□□□□ 0.66
MSC-AS1-204ENST00000518916 CDCA7Q9BWT1 371 aaPredicted RBP19.16■□□□□ 0.66
MSC-AS1-204ENST00000518916 SPINK5Q9NQ38 1064 aaPredicted RBP19.16■□□□□ 0.66
MSC-AS1-204ENST00000518916 LAS1LQ9Y4W2 734 aaKnown RBP19.16■□□□□ 0.66
MSC-AS1-204ENST00000518916 HSP90AB1P08238 724 aaKnown RBP19.15■□□□□ 0.66
MSC-AS1-204ENST00000518916 FAM98CQ17RN3 349 aaKnown RBP19.15■□□□□ 0.66
MSC-AS1-204ENST00000518916 ZCRB1Q8TBF4 217 aaKnown RBP19.15■□□□□ 0.66
MSC-AS1-204ENST00000518916 FANCIQ9NVI1 1328 aa19.15■□□□□ 0.66
MSC-AS1-204ENST00000518916 SHANK3Q9BYB0 1731 aa19.14■□□□□ 0.66
MSC-AS1-204ENST00000518916 KRT27Q7Z3Y8 459 aa19.14■□□□□ 0.65
MSC-AS1-204ENST00000518916 IFNL2Q8IZJ0 200 aa19.14■□□□□ 0.65
MSC-AS1-204ENST00000518916 ADAMTS7Q9UKP4 1686 aa19.14■□□□□ 0.65
MSC-AS1-204ENST00000518916 PHKG2P15735 406 aa19.13■□□□□ 0.65
MSC-AS1-204ENST00000518916 CFAP44Q96MT7 982 aa19.13■□□□□ 0.65
MSC-AS1-204ENST00000518916 SCN11AQ9UI33 1791 aa19.13■□□□□ 0.65
MSC-AS1-204ENST00000518916 TNS2Q63HR2 1409 aa19.12■□□□□ 0.65
MSC-AS1-204ENST00000518916 CEMIPQ8WUJ3 1361 aa19.12■□□□□ 0.65
MSC-AS1-204ENST00000518916 TSR2Q969E8 191 aaKnown RBP19.12■□□□□ 0.65
MSC-AS1-204ENST00000518916 TEFQ10587 303 aa19.11■□□□□ 0.65
MSC-AS1-204ENST00000518916 RCAN3Q9UKA8 241 aa19.11■□□□□ 0.65
MSC-AS1-204ENST00000518916 RNMTO43148 476 aaKnown RBP19.1■□□□□ 0.65
MSC-AS1-204ENST00000518916 ZNF853P0CG23 659 aa19.1■□□□□ 0.65
MSC-AS1-204ENST00000518916 MPRIPQ6WCQ1 1025 aa19.1■□□□□ 0.65
MSC-AS1-204ENST00000518916 IL17REQ8NFR9 667 aa19.1■□□□□ 0.65
MSC-AS1-204ENST00000518916 DCAF5Q96JK2 942 aa19.09■□□□□ 0.65
MSC-AS1-204ENST00000518916 MBIPQ9NS73 344 aa19.09■□□□□ 0.65
MSC-AS1-204ENST00000518916 TSPYL4Q9UJ04 414 aa19.09■□□□□ 0.65
MSC-AS1-204ENST00000518916 KDM6AO15550 1401 aaPredicted RBP19.08■□□□□ 0.65
MSC-AS1-204ENST00000518916 CYP27B1O15528 508 aa19.08■□□□□ 0.64
MSC-AS1-204ENST00000518916 CT47B1P0C2W7 299 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms