RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 EXOSC9Q06265 439 aaKnown RBP19.46■□□□□ 0.71
TRAPPC9-205ENST00000518839 FAM83GA6ND36 823 aa19.45■□□□□ 0.7
TRAPPC9-205ENST00000518839 CSB-PGBD3P0DP91 1061 aa19.45■□□□□ 0.7
TRAPPC9-205ENST00000518839 RARSP54136 660 aaKnown RBP19.45■□□□□ 0.7
TRAPPC9-205ENST00000518839 THUMPD2Q9BTF0 503 aaKnown RBP19.45■□□□□ 0.7
TRAPPC9-205ENST00000518839 LAS1LQ9Y4W2 734 aaKnown RBP19.45■□□□□ 0.7
TRAPPC9-205ENST00000518839 COL16A1Q07092 1604 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC9-205ENST00000518839 CHRNA2Q15822 529 aa19.44■□□□□ 0.7
TRAPPC9-205ENST00000518839 CRB1P82279 1406 aa19.43■□□□□ 0.7
TRAPPC9-205ENST00000518839 COL14A1Q05707 1796 aaKnown RBP19.43■□□□□ 0.7
TRAPPC9-205ENST00000518839 NLRP2Q9NX02 1062 aa19.43■□□□□ 0.7
TRAPPC9-205ENST00000518839 VIRMAQ69YN4 1812 aaKnown RBP19.43■□□□□ 0.7
TRAPPC9-205ENST00000518839 DCTN1Q14203 1278 aa19.42■□□□□ 0.7
TRAPPC9-205ENST00000518839 MCM10Q7L590 875 aa19.42■□□□□ 0.7
TRAPPC9-205ENST00000518839 MBIPQ9NS73 344 aa19.42■□□□□ 0.7
TRAPPC9-205ENST00000518839 BABAM1Q9NWV8 329 aa19.42■□□□□ 0.7
TRAPPC9-205ENST00000518839 CHL1O00533 1208 aa19.41■□□□□ 0.7
TRAPPC9-205ENST00000518839 ALDH1L2Q3SY69 923 aa19.41■□□□□ 0.7
TRAPPC9-205ENST00000518839 AKAP4Q5JQC9 854 aa19.41■□□□□ 0.7
TRAPPC9-205ENST00000518839 RAPGEF4Q8WZA2 1011 aa19.41■□□□□ 0.7
TRAPPC9-205ENST00000518839 PARP4Q9UKK3 1724 aaKnown RBP19.41■□□□□ 0.7
TRAPPC9-205ENST00000518839 OVOS2A0A0G2JMS6 1433 aa19.41■□□□□ 0.7
TRAPPC9-205ENST00000518839 COL5A2P05997 1499 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC9-205ENST00000518839 BCAR3O75815 825 aa19.4■□□□□ 0.7
TRAPPC9-205ENST00000518839 TATP17735 454 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC9-205ENST00000518839 CANXP27824 592 aaKnown RBP19.4■□□□□ 0.7
TRAPPC9-205ENST00000518839 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.4■□□□□ 0.76e-9■□□□□ 10
TRAPPC9-205ENST00000518839 WDR17Q8IZU2 1322 aa19.4■□□□□ 0.7
TRAPPC9-205ENST00000518839 PLIN1O60240 522 aa19.39■□□□□ 0.69
TRAPPC9-205ENST00000518839 PDE3AQ14432 1141 aa19.39■□□□□ 0.69
TRAPPC9-205ENST00000518839 C1orf141Q5JVX7 400 aa19.39■□□□□ 0.69
TRAPPC9-205ENST00000518839 ZNF530Q6P9A1 599 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC9-205ENST00000518839 PELP1Q8IZL8 1130 aaKnown RBP19.39■□□□□ 0.69
TRAPPC9-205ENST00000518839 PKD1L3Q7Z443 1732 aa19.39■□□□□ 0.69
TRAPPC9-205ENST00000518839 MS4A1P11836 297 aa19.38■□□□□ 0.69
TRAPPC9-205ENST00000518839 SPG7Q9UQ90 795 aa19.37■□□□□ 0.69
TRAPPC9-205ENST00000518839 ADAMTS7Q9UKP4 1686 aa19.36■□□□□ 0.69
TRAPPC9-205ENST00000518839 CEMIPQ8WUJ3 1361 aa19.36■□□□□ 0.69
TRAPPC9-205ENST00000518839 KIF16BQ96L93 1317 aa19.36■□□□□ 0.69
TRAPPC9-205ENST00000518839 UBAP1LF5GYI3 381 aa19.36■□□□□ 0.69
TRAPPC9-205ENST00000518839 SMC4Q9NTJ3 1288 aa19.36■□□□□ 0.69
TRAPPC9-205ENST00000518839 VAMP4O75379 141 aa19.35■□□□□ 0.69
TRAPPC9-205ENST00000518839 BRPF1P55201 1214 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC9-205ENST00000518839 TWISTNBQ3B726 338 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC9-205ENST00000518839 TSPYL4Q9UJ04 414 aa19.35■□□□□ 0.69
TRAPPC9-205ENST00000518839 SOS1Q07889 1333 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC9-205ENST00000518839 EVA1CP58658 441 aa19.34■□□□□ 0.69
TRAPPC9-205ENST00000518839 TAF7Q15545 349 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC9-205ENST00000518839 TOM1L2Q6ZVM7 507 aa19.34■□□□□ 0.69
TRAPPC9-205ENST00000518839 IL17REQ8NFR9 667 aa19.34■□□□□ 0.69
TRAPPC9-205ENST00000518839 EXOC6Q8TAG9 804 aa19.34■□□□□ 0.69
TRAPPC9-205ENST00000518839 CRBNQ96SW2 442 aa19.34■□□□□ 0.69
TRAPPC9-205ENST00000518839 CARD10Q9BWT7 1032 aa19.34■□□□□ 0.69
TRAPPC9-205ENST00000518839 MEGF6O75095 1541 aa19.34■□□□□ 0.69
TRAPPC9-205ENST00000518839 SCN11AQ9UI33 1791 aa19.34■□□□□ 0.69
TRAPPC9-205ENST00000518839 IPO8O15397 1037 aaKnown RBP19.33■□□□□ 0.68
TRAPPC9-205ENST00000518839 PIP4K2BP78356 416 aa19.33■□□□□ 0.68
TRAPPC9-205ENST00000518839 ZKSCAN2Q63HK3 967 aa19.33■□□□□ 0.68
TRAPPC9-205ENST00000518839 SSH1Q8WYL5 1049 aa19.33■□□□□ 0.68
TRAPPC9-205ENST00000518839 KDM3BQ7LBC6 1761 aa19.33■□□□□ 0.68
TRAPPC9-205ENST00000518839 FRAT1Q92837 279 aaPredicted RBP19.32■□□□□ 0.68
TRAPPC9-205ENST00000518839 SIPA1L3O60292 1781 aaPredicted RBP19.32■□□□□ 0.68
TRAPPC9-205ENST00000518839 AAMPQ13685 434 aa19.31■□□□□ 0.68
TRAPPC9-205ENST00000518839 CCDC136Q96JN2 1154 aa19.31■□□□□ 0.68
TRAPPC9-205ENST00000518839 CACNA1FO60840 1977 aa19.31■□□□□ 0.68
TRAPPC9-205ENST00000518839 PLCH1Q4KWH8 1693 aa19.3■□□□□ 0.68
TRAPPC9-205ENST00000518839 RNMTO43148 476 aaKnown RBP19.3■□□□□ 0.68
TRAPPC9-205ENST00000518839 HSP90AB1P08238 724 aaKnown RBP19.3■□□□□ 0.68
TRAPPC9-205ENST00000518839 TEFQ10587 303 aa19.3■□□□□ 0.68
TRAPPC9-205ENST00000518839 C20orf194Q5TEA3 1177 aa19.3■□□□□ 0.68
TRAPPC9-205ENST00000518839 C8orf58Q8NAV2 365 aa19.3■□□□□ 0.68
TRAPPC9-205ENST00000518839 CERKQ8TCT0 537 aa19.3■□□□□ 0.68
TRAPPC9-205ENST00000518839 BCL2L13Q9BXK5 485 aa19.3■□□□□ 0.68
TRAPPC9-205ENST00000518839 IFNL2Q8IZJ0 200 aa19.29■□□□□ 0.68
TRAPPC9-205ENST00000518839 TSPYL6Q8N831 410 aa19.29■□□□□ 0.68
TRAPPC9-205ENST00000518839 CHMP4AQ9BY43 222 aa19.29■□□□□ 0.68
TRAPPC9-205ENST00000518839 NWD2Q9ULI1 1742 aa19.28■□□□□ 0.68
TRAPPC9-205ENST00000518839 ARHGAP45Q92619 1136 aa19.28■□□□□ 0.68
TRAPPC9-205ENST00000518839 STRN4Q9NRL3 753 aa19.28■□□□□ 0.68
TRAPPC9-205ENST00000518839 IL2RBP14784 551 aa19.27■□□□□ 0.68
TRAPPC9-205ENST00000518839 PHKG2P15735 406 aa19.27■□□□□ 0.68
TRAPPC9-205ENST00000518839 B4GALNT3Q6L9W6 998 aa19.27■□□□□ 0.68
TRAPPC9-205ENST00000518839 ATF7IPQ6VMQ6 1270 aa19.27■□□□□ 0.68
TRAPPC9-205ENST00000518839 BTG4Q9NY30 223 aa19.27■□□□□ 0.68
TRAPPC9-205ENST00000518839 ELL2O00472 640 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC9-205ENST00000518839 LARP1Q6PKG0 1096 aaKnown RBP19.26■□□□□ 0.67
TRAPPC9-205ENST00000518839 MPRIPQ6WCQ1 1025 aa19.26■□□□□ 0.67
TRAPPC9-205ENST00000518839 FTSJ3Q8IY81 847 aaKnown RBP19.26■□□□□ 0.67
TRAPPC9-205ENST00000518839 DZIP1LQ8IYY4 767 aaKnown RBP19.26■□□□□ 0.67
TRAPPC9-205ENST00000518839 MRPL50Q8N5N7 158 aaKnown RBP19.26■□□□□ 0.67
TRAPPC9-205ENST00000518839 LGR6Q9HBX8 967 aa19.26■□□□□ 0.67
TRAPPC9-205ENST00000518839 NRAPQ86VF7 1730 aa19.25■□□□□ 0.67
TRAPPC9-205ENST00000518839 JCADQ9P266 1359 aa19.25■□□□□ 0.67
TRAPPC9-205ENST00000518839 NOB1Q9ULX3 412 aaKnown RBP19.25■□□□□ 0.67
TRAPPC9-205ENST00000518839 WNK3Q9BYP7 1800 aa19.25■□□□□ 0.67
TRAPPC9-205ENST00000518839 PCDH11XQ9BZA7 1347 aa19.25■□□□□ 0.67
TRAPPC9-205ENST00000518839 PCDH11YQ9BZA8 1340 aa19.25■□□□□ 0.67
TRAPPC9-205ENST00000518839 MRC1P22897 1456 aa19.24■□□□□ 0.67
TRAPPC9-205ENST00000518839 DCAF5Q96JK2 942 aa19.24■□□□□ 0.67
TRAPPC9-205ENST00000518839 MIS18AQ9NYP9 233 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms