RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 U2AF1L5P0DN76 240 aaPredicted RBP23.68■■□□□ 1.38
TRAM1-202ENST00000518678 IL2RBP14784 551 aa23.68■■□□□ 1.38
TRAM1-202ENST00000518678 U2AF1Q01081 240 aaKnown RBP eCLIP23.68■■□□□ 1.38
TRAM1-202ENST00000518678 AEBP1Q8IUX7 1158 aa23.68■■□□□ 1.38
TRAM1-202ENST00000518678 CDCA7Q9BWT1 371 aaPredicted RBP23.68■■□□□ 1.38
TRAM1-202ENST00000518678 MEGF6O75095 1541 aa23.67■■□□□ 1.38
TRAM1-202ENST00000518678 PARP4Q9UKK3 1724 aaKnown RBP23.67■■□□□ 1.38
TRAM1-202ENST00000518678 HMOX1P09601 288 aa23.66■■□□□ 1.38
TRAM1-202ENST00000518678 RAPGEF4Q8WZA2 1011 aa23.66■■□□□ 1.38
TRAM1-202ENST00000518678 OVOS2A0A0G2JMS6 1433 aa23.65■■□□□ 1.38
TRAM1-202ENST00000518678 TATP17735 454 aaPredicted RBP23.64■■□□□ 1.37
TRAM1-202ENST00000518678 WDR43Q15061 677 aaKnown RBP eCLIP23.64■■□□□ 1.37
TRAM1-202ENST00000518678 PLEKHG2Q9H7P9 1386 aa23.64■■□□□ 1.37
TRAM1-202ENST00000518678 LRRC37A3O60309 1634 aa23.63■■□□□ 1.37
TRAM1-202ENST00000518678 EN1Q05925 392 aaPredicted RBP23.63■■□□□ 1.37
TRAM1-202ENST00000518678 SF3B2Q13435 895 aaKnown RBP23.63■■□□□ 1.37
TRAM1-202ENST00000518678 PNISRQ8TF01 805 aaKnown RBP23.63■■□□□ 1.37
TRAM1-202ENST00000518678 FCHSD2O94868 740 aa23.62■■□□□ 1.37
TRAM1-202ENST00000518678 RSPH6AQ9H0K4 717 aa23.62■■□□□ 1.37
TRAM1-202ENST00000518678 PKD1L3Q7Z443 1732 aa23.6■■□□□ 1.37
TRAM1-202ENST00000518678 TRIM37O94972 964 aa23.6■■□□□ 1.37
TRAM1-202ENST00000518678 TNS2Q63HR2 1409 aa23.59■■□□□ 1.37
TRAM1-202ENST00000518678 ADAMTS8Q9UP79 889 aa23.59■■□□□ 1.37
TRAM1-202ENST00000518678 EXOC5O00471 708 aa23.58■■□□□ 1.37
TRAM1-202ENST00000518678 PRKAR2BP31323 418 aa23.58■■□□□ 1.37
TRAM1-202ENST00000518678 DDB1Q16531 1140 aa23.58■■□□□ 1.37
TRAM1-202ENST00000518678 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.58■■□□□ 1.37
TRAM1-202ENST00000518678 SHANK3Q9BYB0 1731 aa23.57■■□□□ 1.36
TRAM1-202ENST00000518678 PSDA5PKW4 1024 aaPredicted RBP23.57■■□□□ 1.36
TRAM1-202ENST00000518678 ZCRB1Q8TBF4 217 aaKnown RBP23.57■■□□□ 1.36
TRAM1-202ENST00000518678 PNNQ9H307 717 aaKnown RBP23.57■■□□□ 1.36
TRAM1-202ENST00000518678 SBF2Q86WG5 1849 aa23.56■■□□□ 1.36
TRAM1-202ENST00000518678 BAG6P46379 1132 aa23.56■■□□□ 1.36
TRAM1-202ENST00000518678 PLEKHO1Q53GL0 409 aaPredicted RBP23.56■■□□□ 1.36
TRAM1-202ENST00000518678 EZH2Q15910 746 aaKnown RBP23.55■■□□□ 1.36
TRAM1-202ENST00000518678 AMOTQ4VCS5 1084 aa23.55■■□□□ 1.36
TRAM1-202ENST00000518678 PLEKHF1Q96S99 279 aa23.55■■□□□ 1.36
TRAM1-202ENST00000518678 SPG7Q9UQ90 795 aa23.55■■□□□ 1.36
TRAM1-202ENST00000518678 PDE3BQ13370 1112 aa23.54■■□□□ 1.36
TRAM1-202ENST00000518678 FAM196AQ6ZSG2 479 aa23.53■■□□□ 1.36
TRAM1-202ENST00000518678 PHACTR3Q96KR7 559 aa23.53■■□□□ 1.36
TRAM1-202ENST00000518678 RREB1Q92766 1687 aa23.52■■□□□ 1.36
TRAM1-202ENST00000518678 PCDH11XQ9BZA7 1347 aa23.52■■□□□ 1.36
TRAM1-202ENST00000518678 PCDH11YQ9BZA8 1340 aa23.52■■□□□ 1.36
TRAM1-202ENST00000518678 NUP188Q5SRE5 1749 aa23.51■■□□□ 1.35
TRAM1-202ENST00000518678 PTF1AQ7RTS3 328 aa23.51■■□□□ 1.35
TRAM1-202ENST00000518678 FAM9BQ8IZU0 186 aa23.51■■□□□ 1.35
TRAM1-202ENST00000518678 CYP27B1O15528 508 aa23.5■■□□□ 1.35
TRAM1-202ENST00000518678 NEFMP07197 916 aa23.5■■□□□ 1.35
TRAM1-202ENST00000518678 MTHFSDQ2M296 383 aaKnown RBP23.5■■□□□ 1.35
TRAM1-202ENST00000518678 MARCH10Q8NA82 808 aaPredicted RBP23.5■■□□□ 1.35
TRAM1-202ENST00000518678 RUNDC1Q96C34 613 aa23.5■■□□□ 1.35
TRAM1-202ENST00000518678 ZNF530Q6P9A1 599 aaPredicted RBP23.49■■□□□ 1.35
TRAM1-202ENST00000518678 CCDC146Q8IYE0 955 aa23.49■■□□□ 1.35
TRAM1-202ENST00000518678 DDX54Q8TDD1 881 aaKnown RBP23.49■■□□□ 1.35
TRAM1-202ENST00000518678 MAPK8IP3Q9UPT6 1336 aa23.49■■□□□ 1.35
TRAM1-202ENST00000518678 APBA3O96018 575 aa23.48■■□□□ 1.35
TRAM1-202ENST00000518678 IFNL2Q8IZJ0 200 aa23.48■■□□□ 1.35
TRAM1-202ENST00000518678 GAS2L2Q8NHY3 880 aa23.48■■□□□ 1.35
TRAM1-202ENST00000518678 CAMKK2Q96RR4 588 aa23.48■■□□□ 1.35
TRAM1-202ENST00000518678 PHKG2P15735 406 aa23.47■■□□□ 1.35
TRAM1-202ENST00000518678 R3HDM1Q15032 1099 aaKnown RBP23.45■■□□□ 1.34
TRAM1-202ENST00000518678 AKAP4Q5JQC9 854 aa23.45■■□□□ 1.34
TRAM1-202ENST00000518678 C1orf141Q5JVX7 400 aa23.45■■□□□ 1.34
TRAM1-202ENST00000518678 NKX1-1Q15270 411 aaPredicted RBP23.44■■□□□ 1.34
TRAM1-202ENST00000518678 NFE2L2Q16236 605 aa23.44■■□□□ 1.34
TRAM1-202ENST00000518678 BCL9O00512 1426 aa23.43■■□□□ 1.34
TRAM1-202ENST00000518678 HSP90AB1P08238 724 aaKnown RBP23.42■■□□□ 1.34
TRAM1-202ENST00000518678 MAP3K5Q99683 1374 aa23.41■■□□□ 1.34
TRAM1-202ENST00000518678 DLG5Q8TDM6 1919 aa23.41■■□□□ 1.34
TRAM1-202ENST00000518678 LRP5O75197 1615 aa23.41■■□□□ 1.34
TRAM1-202ENST00000518678 GNAT3A8MTJ3 354 aa23.4■■□□□ 1.34
TRAM1-202ENST00000518678 TMPOP42166 694 aaKnown RBP23.4■■□□□ 1.34
TRAM1-202ENST00000518678 ADAMTS7Q9UKP4 1686 aa23.39■■□□□ 1.34
TRAM1-202ENST00000518678 APAF1O14727 1248 aa23.39■■□□□ 1.33
TRAM1-202ENST00000518678 DCAF5Q96JK2 942 aa23.39■■□□□ 1.33
TRAM1-202ENST00000518678 KDM6AO15550 1401 aaPredicted RBP23.38■■□□□ 1.33
TRAM1-202ENST00000518678 DOT1LQ8TEK3 1739 aa23.38■■□□□ 1.33
TRAM1-202ENST00000518678 TOGARAM1Q9Y4F4 1720 aa23.38■■□□□ 1.33
TRAM1-202ENST00000518678 SCN11AQ9UI33 1791 aa23.37■■□□□ 1.33
TRAM1-202ENST00000518678 HTATSF1O43719 755 aaKnown RBP23.37■■□□□ 1.33
TRAM1-202ENST00000518678 MPRIPQ6WCQ1 1025 aa23.37■■□□□ 1.33
TRAM1-202ENST00000518678 RRP7AQ9Y3A4 280 aaKnown RBP23.37■■□□□ 1.33
TRAM1-202ENST00000518678 VIRMAQ69YN4 1812 aaKnown RBP23.36■■□□□ 1.33
TRAM1-202ENST00000518678 RIPK4P57078 832 aa23.36■■□□□ 1.33
TRAM1-202ENST00000518678 RNMTO43148 476 aaKnown RBP23.35■■□□□ 1.33
TRAM1-202ENST00000518678 NHSQ6T4R5 1651 aa23.35■■□□□ 1.33
TRAM1-202ENST00000518678 RGPD3A6NKT7 1758 aaPredicted RBP23.35■■□□□ 1.33
TRAM1-202ENST00000518678 RGPD4Q7Z3J3 1758 aa23.35■■□□□ 1.33
TRAM1-202ENST00000518678 NEUROD2Q15784 382 aa23.34■■□□□ 1.33
TRAM1-202ENST00000518678 IL17REQ8NFR9 667 aa23.34■■□□□ 1.33
TRAM1-202ENST00000518678 RTF1Q92541 710 aaKnown RBP23.34■■□□□ 1.33
TRAM1-202ENST00000518678 LGR6Q9HBX8 967 aa23.34■■□□□ 1.33
TRAM1-202ENST00000518678 LMOD3Q0VAK6 560 aa23.33■■□□□ 1.33
TRAM1-202ENST00000518678 ACSBG1Q96GR2 724 aa23.33■■□□□ 1.33
TRAM1-202ENST00000518678 CEMIPQ8WUJ3 1361 aa23.32■■□□□ 1.32
TRAM1-202ENST00000518678 ERVV-2B6SEH9 535 aa23.32■■□□□ 1.32
TRAM1-202ENST00000518678 KCNQ2O43526 872 aa23.32■■□□□ 1.32
TRAM1-202ENST00000518678 NCBP3Q53F19 620 aaKnown RBP23.32■■□□□ 1.32
TRAM1-202ENST00000518678 ITGB4P16144 1822 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms