RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 RNF217Q8TC41 542 aa7.8□□□□□ -1.16
PABPC1-206ENST00000518293 KCNMA1Q12791 1236 aa7.79□□□□□ -1.16
PABPC1-206ENST00000518293 VWA5B2Q8N398 1253 aa7.79□□□□□ -1.16
PABPC1-206ENST00000518293 FNBP4Q8N3X1 1017 aaPredicted RBP7.79□□□□□ -1.16
PABPC1-206ENST00000518293 A6NJR5 290 aa7.78□□□□□ -1.16
PABPC1-206ENST00000518293 PTGIRP43119 386 aa7.78□□□□□ -1.16
PABPC1-206ENST00000518293 WASHC4Q2M389 1173 aa7.78□□□□□ -1.16
PABPC1-206ENST00000518293 ESPNB1AK53 854 aa7.77□□□□□ -1.17
PABPC1-206ENST00000518293 RNF225M0QZC1 329 aaPredicted RBP7.77□□□□□ -1.17
PABPC1-206ENST00000518293 LILRA1O75019 489 aa7.77□□□□□ -1.17
PABPC1-206ENST00000518293 SEPT12Q8IYM1 358 aa7.77□□□□□ -1.17
PABPC1-206ENST00000518293 SVOPQ8N4V2 548 aa7.77□□□□□ -1.17
PABPC1-206ENST00000518293 PCDHB9Q9Y5E1 797 aa7.77□□□□□ -1.17
PABPC1-206ENST00000518293 ADD1P35611 737 aaKnown RBP7.76□□□□□ -1.17
PABPC1-206ENST00000518293 RNFT1Q5M7Z0 435 aa7.76□□□□□ -1.17
PABPC1-206ENST00000518293 FOXD4L5Q5VV16 416 aaPredicted RBP7.76□□□□□ -1.17
PABPC1-206ENST00000518293 LYSMD3Q7Z3D4 306 aa7.76□□□□□ -1.17
PABPC1-206ENST00000518293 PROSER2Q86WR7 435 aaPredicted RBP7.76□□□□□ -1.17
PABPC1-206ENST00000518293 CYLDQ9NQC7 956 aa7.76□□□□□ -1.17
PABPC1-206ENST00000518293 ADAMTS8Q9UP79 889 aa7.76□□□□□ -1.17
PABPC1-206ENST00000518293 SENP3-EIF4A1A0A087X0R7 540 aa7.75□□□□□ -1.17
PABPC1-206ENST00000518293 ZNF330Q9Y3S2 320 aaPredicted RBP7.75□□□□□ -1.17
PABPC1-206ENST00000518293 POM121CA8CG34 1229 aa7.74□□□□□ -1.17
PABPC1-206ENST00000518293 EIF4G2P78344 907 aaKnown RBP eCLIP7.74□□□□□ -1.17
PABPC1-206ENST00000518293 ZNF385CQ66K41 422 aaPredicted RBP7.74□□□□□ -1.17
PABPC1-206ENST00000518293 TMEM151AQ8N4L1 468 aa7.74□□□□□ -1.17
PABPC1-206ENST00000518293 ZMYND15Q9H091 742 aa7.74□□□□□ -1.17
PABPC1-206ENST00000518293 LOC100996750A0A140TA64 210 aa7.73□□□□□ -1.17
PABPC1-206ENST00000518293 GIGYF1O75420 1035 aaPredicted RBP7.73□□□□□ -1.17
PABPC1-206ENST00000518293 SLURP2P0DP57 97 aa7.73□□□□□ -1.17
PABPC1-206ENST00000518293 MCCD1P59942 119 aaPredicted RBP7.73□□□□□ -1.17
PABPC1-206ENST00000518293 WWC1Q8IX03 1113 aa7.73□□□□□ -1.17
PABPC1-206ENST00000518293 KDF1Q8NAX2 398 aaPredicted RBP7.73□□□□□ -1.17
PABPC1-206ENST00000518293 KRTAP4-6Q9BYQ5 205 aa7.73□□□□□ -1.17
PABPC1-206ENST00000518293 ALG2Q9H553 416 aa7.73□□□□□ -1.17
PABPC1-206ENST00000518293 CEP126Q9P2H0 1117 aa7.73□□□□□ -1.17
PABPC1-206ENST00000518293 ATP5J2-PTCD1G3V325 749 aa7.72□□□□□ -1.17
PABPC1-206ENST00000518293 GDF11O95390 407 aa7.72□□□□□ -1.17
PABPC1-206ENST00000518293 RASSF7Q02833 373 aa7.72□□□□□ -1.17
PABPC1-206ENST00000518293 PRICKLE2Q7Z3G6 844 aa7.72□□□□□ -1.17
PABPC1-206ENST00000518293 KCTD17Q8N5Z5 321 aa7.72□□□□□ -1.17
PABPC1-206ENST00000518293 TRAK2O60296 914 aa7.71□□□□□ -1.18
PABPC1-206ENST00000518293 GSK3AP49840 483 aa7.71□□□□□ -1.18
PABPC1-206ENST00000518293 RNF144AP50876 292 aaPredicted RBP7.71□□□□□ -1.18
PABPC1-206ENST00000518293 CCDC125Q86Z20 511 aa7.71□□□□□ -1.18
PABPC1-206ENST00000518293 ADAMTS19Q8TE59 1207 aa7.71□□□□□ -1.18
PABPC1-206ENST00000518293 WHAMMQ8TF30 809 aa7.71□□□□□ -1.18
PABPC1-206ENST00000518293 MEN1O00255 615 aa7.7□□□□□ -1.18
PABPC1-206ENST00000518293 RHOQP17081 205 aa7.7□□□□□ -1.18
PABPC1-206ENST00000518293 SOX11P35716 441 aa7.7□□□□□ -1.18
PABPC1-206ENST00000518293 SEMA3FQ13275 785 aa7.7□□□□□ -1.18
PABPC1-206ENST00000518293 RNF20Q5VTR2 975 aa7.7□□□□□ -1.18
PABPC1-206ENST00000518293 PHTF2Q8N3S3 785 aa7.7□□□□□ -1.18
PABPC1-206ENST00000518293 ZNF592Q92610 1267 aa7.7□□□□□ -1.18
PABPC1-206ENST00000518293 ADAMTS2O95450 1211 aa7.69□□□□□ -1.18
PABPC1-206ENST00000518293 MARSP56192 900 aaKnown RBP7.69□□□□□ -1.18
PABPC1-206ENST00000518293 HDGFL1Q5TGJ6 251 aa7.69□□□□□ -1.18
PABPC1-206ENST00000518293 C14orf37Q86TY3 774 aa7.69□□□□□ -1.18
PABPC1-206ENST00000518293 GPC1P35052 558 aa7.68□□□□□ -1.18
PABPC1-206ENST00000518293 MAP3K10Q02779 954 aa7.68□□□□□ -1.18
PABPC1-206ENST00000518293 SRSF11Q05519 484 aaKnown RBP7.68□□□□□ -1.18
PABPC1-206ENST00000518293 TSGA10IPQ3SY00 556 aa7.68□□□□□ -1.18
PABPC1-206ENST00000518293 CC2D2BQ6DHV5 1058 aa7.68□□□□□ -1.18
PABPC1-206ENST00000518293 FOXR1Q6PIV2 292 aa7.68□□□□□ -1.18
PABPC1-206ENST00000518293 GMCL1Q96IK5 515 aa7.68□□□□□ -1.18
PABPC1-206ENST00000518293 ZNF777Q9ULD5 760 aaPredicted RBP7.68□□□□□ -1.18
PABPC1-206ENST00000518293 A0A1W2PRU2 124 aa7.67□□□□□ -1.18
PABPC1-206ENST00000518293 ARHGEF15O94989 841 aa7.67□□□□□ -1.18
PABPC1-206ENST00000518293 ERVK-9P63128 1117 aa7.67□□□□□ -1.18
PABPC1-206ENST00000518293 SLC27A3Q5K4L6 730 aa7.67□□□□□ -1.18
PABPC1-206ENST00000518293 RIPOR1Q6ZS17 1223 aa7.67□□□□□ -1.18
PABPC1-206ENST00000518293 NLRP3Q96P20 1036 aa7.67□□□□□ -1.18
PABPC1-206ENST00000518293 ESF1Q9H501 851 aaKnown RBP7.67□□□□□ -1.18
PABPC1-206ENST00000518293 CUEDC1Q9NWM3 386 aaPredicted RBP7.67□□□□□ -1.18
PABPC1-206ENST00000518293 IRS1P35568 1242 aa7.66□□□□□ -1.18
PABPC1-206ENST00000518293 CYP2U1Q7Z449 544 aa7.66□□□□□ -1.18
PABPC1-206ENST00000518293 TRIM22Q8IYM9 498 aa7.66□□□□□ -1.18
PABPC1-206ENST00000518293 ZNF837Q96EG3 531 aaPredicted RBP7.66□□□□□ -1.18
PABPC1-206ENST00000518293 SCARF2Q96GP6 870 aaPredicted RBP7.66□□□□□ -1.18
PABPC1-206ENST00000518293 CCDC85AQ96PX6 553 aaPredicted RBP7.66□□□□□ -1.18
PABPC1-206ENST00000518293 PIK3CDO00329 1044 aa7.65□□□□□ -1.18
PABPC1-206ENST00000518293 GAS6Q14393 721 aa7.65□□□□□ -1.18
PABPC1-206ENST00000518293 SLFNL1Q499Z3 407 aa7.65□□□□□ -1.18
PABPC1-206ENST00000518293 LYPD4Q6UWN0 246 aa7.65□□□□□ -1.18
PABPC1-206ENST00000518293 GLMNQ92990 594 aa7.65□□□□□ -1.18
PABPC1-206ENST00000518293 ENAMQ9NRM1 1142 aa7.65□□□□□ -1.18
PABPC1-206ENST00000518293 CHIC2Q9UKJ5 165 aa7.65□□□□□ -1.18
PABPC1-206ENST00000518293 TIMELESSQ9UNS1 1208 aa7.65□□□□□ -1.18
PABPC1-206ENST00000518293 H7C1W4 665 aa7.64□□□□□ -1.19
PABPC1-206ENST00000518293 KANK3Q6NY19 840 aa7.64□□□□□ -1.19
PABPC1-206ENST00000518293 RNF135Q8IUD6 432 aa7.64□□□□□ -1.19
PABPC1-206ENST00000518293 GAS2L1Q99501 681 aaPredicted RBP7.64□□□□□ -1.19
PABPC1-206ENST00000518293 CDCA7Q9BWT1 371 aaPredicted RBP7.64□□□□□ -1.19
PABPC1-206ENST00000518293 MBIPQ9NS73 344 aa7.64□□□□□ -1.19
PABPC1-206ENST00000518293 DYRK1BQ9Y463 629 aa7.64□□□□□ -1.19
PABPC1-206ENST00000518293 GPR25O00155 361 aa7.63□□□□□ -1.19
PABPC1-206ENST00000518293 CELA2BP08218 269 aaPredicted RBP7.63□□□□□ -1.19
PABPC1-206ENST00000518293 POU4F2Q12837 409 aa7.63□□□□□ -1.19
PABPC1-206ENST00000518293 SUZ12Q15022 739 aaKnown RBP7.63□□□□□ -1.19
PABPC1-206ENST00000518293 UCN2Q96RP3 112 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms