RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 CFAP53Q96M91 514 aa14.05□□□□□ -0.16
BRD9-216ENST00000518251 COL3A1P02461 1466 aaPredicted RBP14.05□□□□□ -0.16
BRD9-216ENST00000518251 ZBTB7AO95365 584 aa14.04□□□□□ -0.16
BRD9-216ENST00000518251 MTHFSP49914 203 aa14.04□□□□□ -0.16
BRD9-216ENST00000518251 HNRNPUQ00839 825 aaKnown RBP eCLIP14.04□□□□□ -0.16
BRD9-216ENST00000518251 WDR43Q15061 677 aaKnown RBP eCLIP14.04□□□□□ -0.16
BRD9-216ENST00000518251 MAP2P11137 1827 aaKnown RBP14.04□□□□□ -0.16
BRD9-216ENST00000518251 UTRNP46939 3433 aa14.03□□□□□ -0.16
BRD9-216ENST00000518251 ARHGEF25Q86VW2 580 aa14.03□□□□□ -0.16
BRD9-216ENST00000518251 CDCA7Q9BWT1 371 aaPredicted RBP14.02□□□□□ -0.17
BRD9-216ENST00000518251 RGPD5Q99666 1765 aa14.01□□□□□ -0.17
BRD9-216ENST00000518251 TXNRD1Q16881 649 aa14□□□□□ -0.17
BRD9-216ENST00000518251 SGIP1Q9BQI5 828 aa14□□□□□ -0.17
BRD9-216ENST00000518251 CARD10Q9BWT7 1032 aa14□□□□□ -0.17
BRD9-216ENST00000518251 DCAF8L1A6NGE4 600 aa13.99□□□□□ -0.17
BRD9-216ENST00000518251 SLC15A2Q16348 729 aa13.99□□□□□ -0.17
BRD9-216ENST00000518251 ZNF784Q8NCA9 323 aaPredicted RBP13.99□□□□□ -0.17
BRD9-216ENST00000518251 FHDC1Q9C0D6 1143 aaPredicted RBP13.99□□□□□ -0.17
BRD9-216ENST00000518251 STK32BQ9NY57 414 aa13.99□□□□□ -0.17
BRD9-216ENST00000518251 POLKQ9UBT6 870 aa13.99□□□□□ -0.17
BRD9-216ENST00000518251 KCNH5Q8NCM2 988 aa13.98□□□□□ -0.17
BRD9-216ENST00000518251 ADAMTS8Q9UP79 889 aa13.98□□□□□ -0.17
BRD9-216ENST00000518251 MAP3K5Q99683 1374 aa13.97□□□□□ -0.17
BRD9-216ENST00000518251 ERBB3P21860 1342 aa13.97□□□□□ -0.17
BRD9-216ENST00000518251 ZBED9Q6R2W3 1325 aa13.97□□□□□ -0.17
BRD9-216ENST00000518251 SOX12O15370 315 aa13.97□□□□□ -0.17
BRD9-216ENST00000518251 MTFR1LQ9H019 292 aa13.97□□□□□ -0.17
BRD9-216ENST00000518251 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
BRD9-216ENST00000518251 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
BRD9-216ENST00000518251 CSB-PGBD3P0DP91 1061 aa13.96□□□□□ -0.17
BRD9-216ENST00000518251 FBLN1P23142 703 aa13.96□□□□□ -0.17
BRD9-216ENST00000518251 RRS1Q15050 365 aaKnown RBP13.96□□□□□ -0.17
BRD9-216ENST00000518251 NUDCQ9Y266 331 aa13.96□□□□□ -0.17
BRD9-216ENST00000518251 BTAF1O14981 1849 aa13.96□□□□□ -0.17
BRD9-216ENST00000518251 LTN1O94822 1766 aa13.96□□□□□ -0.18
BRD9-216ENST00000518251 PPM1GO15355 546 aaPredicted RBP13.95□□□□□ -0.18
BRD9-216ENST00000518251 DIAPH1O60610 1272 aaKnown RBP13.95□□□□□ -0.18
BRD9-216ENST00000518251 SYT17Q9BSW7 474 aa13.95□□□□□ -0.18
BRD9-216ENST00000518251 ZNF827Q17R98 1081 aa13.94□□□□□ -0.18
BRD9-216ENST00000518251 RTL1A6NKG5 1358 aa13.94□□□□□ -0.18
BRD9-216ENST00000518251 FLT4P35916 1363 aa13.94□□□□□ -0.18
BRD9-216ENST00000518251 KIF24Q5T7B8 1368 aa13.94□□□□□ -0.18
BRD9-216ENST00000518251 MAP3K19Q56UN5 1328 aa13.93□□□□□ -0.18
BRD9-216ENST00000518251 COL24A1Q17RW2 1714 aa13.93□□□□□ -0.18
BRD9-216ENST00000518251 QSER1Q2KHR3 1735 aa13.93□□□□□ -0.18
BRD9-216ENST00000518251 EXOC5O00471 708 aa13.93□□□□□ -0.18
BRD9-216ENST00000518251 ACSBG1Q96GR2 724 aa13.92□□□□□ -0.18
BRD9-216ENST00000518251 FAM208AQ9UK61 1670 aaKnown RBP13.91□□□□□ -0.18
BRD9-216ENST00000518251 U2SURPO15042 1029 aaKnown RBP13.91□□□□□ -0.18
BRD9-216ENST00000518251 U2AF1L5P0DN76 240 aaPredicted RBP13.91□□□□□ -0.18
BRD9-216ENST00000518251 U2AF1Q01081 240 aaKnown RBP eCLIP13.91□□□□□ -0.18
BRD9-216ENST00000518251 CCDC146Q8IYE0 955 aa13.91□□□□□ -0.18
BRD9-216ENST00000518251 AMPHP49418 695 aa13.9□□□□□ -0.18
BRD9-216ENST00000518251 ARXQ96QS3 562 aa13.9□□□□□ -0.18
BRD9-216ENST00000518251 TUBGCP6Q96RT7 1819 aa13.9□□□□□ -0.18
BRD9-216ENST00000518251 DOT1LQ8TEK3 1739 aa13.9□□□□□ -0.18
BRD9-216ENST00000518251 IL2RBP14784 551 aa13.89□□□□□ -0.19
BRD9-216ENST00000518251 IL13P35225 146 aa13.89□□□□□ -0.19
BRD9-216ENST00000518251 LRRC4BQ9NT99 713 aa13.89□□□□□ -0.19
BRD9-216ENST00000518251 SHANK3Q9BYB0 1731 aa13.89□□□□□ -0.19
BRD9-216ENST00000518251 SENP3-EIF4A1A0A087X0R7 540 aa13.88□□□□□ -0.19
BRD9-216ENST00000518251 RUNDC1Q96C34 613 aa13.88□□□□□ -0.19
BRD9-216ENST00000518251 HOXC9P31274 260 aa13.87□□□□□ -0.19
BRD9-216ENST00000518251 EIF4A2Q14240 407 aaKnown RBP13.87□□□□□ -0.19
BRD9-216ENST00000518251 HSP90AB2PQ58FF8 381 aa13.87□□□□□ -0.19
BRD9-216ENST00000518251 ANKRD24Q8TF21 1146 aa13.87□□□□□ -0.19
BRD9-216ENST00000518251 AKT1S1Q96B36 256 aa13.87□□□□□ -0.19
BRD9-216ENST00000518251 PNNQ9H307 717 aaKnown RBP13.87□□□□□ -0.19
BRD9-216ENST00000518251 NLRP2Q9NX02 1062 aa13.87□□□□□ -0.19
BRD9-216ENST00000518251 PNPLA7Q6ZV29 1317 aa13.87□□□□□ -0.19
BRD9-216ENST00000518251 C1QTNF8P60827 252 aa13.86□□□□□ -0.19
BRD9-216ENST00000518251 NGEFQ8N5V2 710 aa13.86□□□□□ -0.19
BRD9-216ENST00000518251 MAPK8IP3Q9UPT6 1336 aa13.86□□□□□ -0.19
BRD9-216ENST00000518251 LY75O60449 1722 aa13.85□□□□□ -0.19
BRD9-216ENST00000518251 APAF1O14727 1248 aa13.85□□□□□ -0.19
BRD9-216ENST00000518251 SALL2Q9Y467 1007 aaPredicted RBP13.85□□□□□ -0.19
BRD9-216ENST00000518251 GOLGB1Q14789 3259 aaKnown RBP13.85□□□□□ -0.19
BRD9-216ENST00000518251 MEGF6O75095 1541 aa13.85□□□□□ -0.19
BRD9-216ENST00000518251 CHD4Q14839 1912 aa13.84□□□□□ -0.19
BRD9-216ENST00000518251 FCHSD2O94868 740 aa13.84□□□□□ -0.19
BRD9-216ENST00000518251 IP6K1Q92551 441 aa13.84□□□□□ -0.19
BRD9-216ENST00000518251 RSPH6AQ9H0K4 717 aa13.84□□□□□ -0.19
BRD9-216ENST00000518251 NEFMP07197 916 aa13.83□□□□□ -0.2
BRD9-216ENST00000518251 PLEKHF1Q96S99 279 aa13.83□□□□□ -0.2
BRD9-216ENST00000518251 HMOX1P09601 288 aa13.82□□□□□ -0.2
BRD9-216ENST00000518251 PRKAR2BP31323 418 aa13.82□□□□□ -0.2
BRD9-216ENST00000518251 SLC27A3Q5K4L6 730 aa13.82□□□□□ -0.2
BRD9-216ENST00000518251 IGSF1Q8N6C5 1336 aa13.82□□□□□ -0.2
BRD9-216ENST00000518251 NCBP3Q53F19 620 aaKnown RBP13.81□□□□□ -0.2
BRD9-216ENST00000518251 NLGN2Q8NFZ4 835 aa13.81□□□□□ -0.2
BRD9-216ENST00000518251 ZNF521Q96K83 1311 aa13.81□□□□□ -0.2
BRD9-216ENST00000518251 GPR162Q16538 588 aa13.8□□□□□ -0.2
BRD9-216ENST00000518251 SLC16A10Q8TF71 515 aa13.8□□□□□ -0.2
BRD9-216ENST00000518251 KDRP35968 1356 aa13.8□□□□□ -0.2
BRD9-216ENST00000518251 GIGYF1O75420 1035 aaPredicted RBP13.79□□□□□ -0.2
BRD9-216ENST00000518251 POLD1P28340 1107 aa13.79□□□□□ -0.2
BRD9-216ENST00000518251 KCNQ4P56696 695 aa13.79□□□□□ -0.2
BRD9-216ENST00000518251 SULT6B1Q6IMI4 303 aa13.79□□□□□ -0.2
BRD9-216ENST00000518251 KLHL34Q8N239 644 aa13.79□□□□□ -0.2
BRD9-216ENST00000518251 LTV1Q96GA3 475 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms