RNA–Protein interactions for RNA: ENST00000518080.2

HMBOX1-205, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-205ENST00000518080 KIAA0232Q92628 1395 aa13.07□□□□□ -0.32
HMBOX1-205ENST00000518080 COL16A1Q07092 1604 aaPredicted RBP13.06□□□□□ -0.32
HMBOX1-205ENST00000518080 LMO7Q8WWI1 1683 aa13.06□□□□□ -0.32
HMBOX1-205ENST00000518080 CSB-PGBD3P0DP91 1061 aa13.06□□□□□ -0.32
HMBOX1-205ENST00000518080 GAS2L2Q8NHY3 880 aa13.06□□□□□ -0.32
HMBOX1-205ENST00000518080 PHACTR3Q96KR7 559 aa13.06□□□□□ -0.32
HMBOX1-205ENST00000518080 PRDM11Q9NQV5 511 aa13.06□□□□□ -0.32
HMBOX1-205ENST00000518080 PARP4Q9UKK3 1724 aaKnown RBP13.05□□□□□ -0.32
HMBOX1-205ENST00000518080 COL14A1Q05707 1796 aaKnown RBP13.05□□□□□ -0.32
HMBOX1-205ENST00000518080 DUSP27Q5VZP5 1158 aa13.05□□□□□ -0.32
HMBOX1-205ENST00000518080 USHBP1Q8N6Y0 703 aa13.05□□□□□ -0.32
HMBOX1-205ENST00000518080 IL16Q14005 1332 aa13.05□□□□□ -0.32
HMBOX1-205ENST00000518080 LRRC37A3O60309 1634 aa13.04□□□□□ -0.32
HMBOX1-205ENST00000518080 PIP4K2BP78356 416 aa13.04□□□□□ -0.32
HMBOX1-205ENST00000518080 RTF1Q92541 710 aaKnown RBP13.04□□□□□ -0.32
HMBOX1-205ENST00000518080 LRRC59Q96AG4 307 aaKnown RBP13.04□□□□□ -0.32
HMBOX1-205ENST00000518080 ERBB3P21860 1342 aa13.04□□□□□ -0.32
HMBOX1-205ENST00000518080 UBAP1LF5GYI3 381 aa13.03□□□□□ -0.32
HMBOX1-205ENST00000518080 CHRNA2Q15822 529 aa13.03□□□□□ -0.32
HMBOX1-205ENST00000518080 TRIM35Q9UPQ4 493 aa13.03□□□□□ -0.32
HMBOX1-205ENST00000518080 LAS1LQ9Y4W2 734 aaKnown RBP13.03□□□□□ -0.32
HMBOX1-205ENST00000518080 PLCH1Q4KWH8 1693 aa13.02□□□□□ -0.32
HMBOX1-205ENST00000518080 IRX6P78412 446 aaPredicted RBP13.02□□□□□ -0.33
HMBOX1-205ENST00000518080 NLRP2Q9NX02 1062 aa13.02□□□□□ -0.33
HMBOX1-205ENST00000518080 RRP1P56182 461 aaKnown RBP13.01□□□□□ -0.33
HMBOX1-205ENST00000518080 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.01□□□□□ -0.33
HMBOX1-205ENST00000518080 FANCIQ9NVI1 1328 aa13.01□□□□□ -0.33
HMBOX1-205ENST00000518080 MAP3K5Q99683 1374 aa13.01□□□□□ -0.33
HMBOX1-205ENST00000518080 NCAPD2Q15021 1401 aa13.01□□□□□ -0.33
HMBOX1-205ENST00000518080 PKD1L3Q7Z443 1732 aa13□□□□□ -0.33
HMBOX1-205ENST00000518080 CANXP27824 592 aaKnown RBP13□□□□□ -0.33
HMBOX1-205ENST00000518080 GNAI1P63096 354 aa13□□□□□ -0.33
HMBOX1-205ENST00000518080 NBPF6Q5VWK0 638 aa13□□□□□ -0.33
HMBOX1-205ENST00000518080 TRMT2AQ8IZ69 625 aaKnown RBP13□□□□□ -0.33
HMBOX1-205ENST00000518080 NBPF4Q96M43 638 aa13□□□□□ -0.33
HMBOX1-205ENST00000518080 COL5A2P05997 1499 aaPredicted RBP12.99□□□□□ -0.33
HMBOX1-205ENST00000518080 MTHFSDQ2M296 383 aaKnown RBP12.99□□□□□ -0.33
HMBOX1-205ENST00000518080 RAPGEF4Q8WZA2 1011 aa12.99□□□□□ -0.33
HMBOX1-205ENST00000518080 TSR2Q969E8 191 aaKnown RBP12.99□□□□□ -0.33
HMBOX1-205ENST00000518080 THUMPD2Q9BTF0 503 aaKnown RBP12.99□□□□□ -0.33
HMBOX1-205ENST00000518080 IFT57Q9NWB7 429 aa12.99□□□□□ -0.33
HMBOX1-205ENST00000518080 AXIN2Q9Y2T1 843 aa12.99□□□□□ -0.33
HMBOX1-205ENST00000518080 WNK3Q9BYP7 1800 aa12.98□□□□□ -0.33
HMBOX1-205ENST00000518080 FAM83GA6ND36 823 aa12.98□□□□□ -0.33
HMBOX1-205ENST00000518080 PLEKHO1Q53GL0 409 aaPredicted RBP12.98□□□□□ -0.33
HMBOX1-205ENST00000518080 C1orf141Q5JVX7 400 aa12.98□□□□□ -0.33
HMBOX1-205ENST00000518080 GNAT3A8MTJ3 354 aa12.97□□□□□ -0.33
HMBOX1-205ENST00000518080 TATP17735 454 aaPredicted RBP12.97□□□□□ -0.33
HMBOX1-205ENST00000518080 AMOTQ4VCS5 1084 aa12.97□□□□□ -0.33
HMBOX1-205ENST00000518080 ZNF530Q6P9A1 599 aaPredicted RBP12.97□□□□□ -0.33
HMBOX1-205ENST00000518080 MCM10Q7L590 875 aa12.97□□□□□ -0.33
HMBOX1-205ENST00000518080 RNF123Q5XPI4 1314 aa12.96□□□□□ -0.33
HMBOX1-205ENST00000518080 WDR17Q8IZU2 1322 aa12.96□□□□□ -0.33
HMBOX1-205ENST00000518080 CT47B1P0C2W7 299 aaPredicted RBP12.96□□□□□ -0.33
HMBOX1-205ENST00000518080 EVA1CP58658 441 aa12.96□□□□□ -0.33
HMBOX1-205ENST00000518080 DCTN1Q14203 1278 aa12.96□□□□□ -0.33
HMBOX1-205ENST00000518080 TOM1L2Q6ZVM7 507 aa12.96□□□□□ -0.33
HMBOX1-205ENST00000518080 STRN4Q9NRL3 753 aa12.96□□□□□ -0.33
HMBOX1-205ENST00000518080 SCN11AQ9UI33 1791 aa12.96□□□□□ -0.34
HMBOX1-205ENST00000518080 NWD2Q9ULI1 1742 aa12.96□□□□□ -0.34
HMBOX1-205ENST00000518080 MEGF6O75095 1541 aa12.95□□□□□ -0.34
HMBOX1-205ENST00000518080 HTATSF1O43719 755 aaKnown RBP12.95□□□□□ -0.34
HMBOX1-205ENST00000518080 EVX2Q03828 476 aa12.95□□□□□ -0.34
HMBOX1-205ENST00000518080 EXOSC9Q06265 439 aaKnown RBP12.95□□□□□ -0.34
HMBOX1-205ENST00000518080 ERICH6BQ5W0A0 696 aa12.95□□□□□ -0.34
HMBOX1-205ENST00000518080 CERKQ8TCT0 537 aa12.95□□□□□ -0.34
HMBOX1-205ENST00000518080 PLEKHG2Q9H7P9 1386 aa12.94□□□□□ -0.34
HMBOX1-205ENST00000518080 NRAPQ86VF7 1730 aa12.94□□□□□ -0.34
HMBOX1-205ENST00000518080 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
HMBOX1-205ENST00000518080 KDM3BQ7LBC6 1761 aa12.94□□□□□ -0.34
HMBOX1-205ENST00000518080 AKAP4Q5JQC9 854 aa12.93□□□□□ -0.34
HMBOX1-205ENST00000518080 MBIPQ9NS73 344 aa12.93□□□□□ -0.34
HMBOX1-205ENST00000518080 SPG7Q9UQ90 795 aa12.93□□□□□ -0.34
HMBOX1-205ENST00000518080 SIPA1L3O60292 1781 aaPredicted RBP12.93□□□□□ -0.34
HMBOX1-205ENST00000518080 OVOS2A0A0G2JMS6 1433 aa12.93□□□□□ -0.34
HMBOX1-205ENST00000518080 CRB1P82279 1406 aa12.92□□□□□ -0.34
HMBOX1-205ENST00000518080 SMC4Q9NTJ3 1288 aa12.92□□□□□ -0.34
HMBOX1-205ENST00000518080 TSPYL4Q9UJ04 414 aa12.92□□□□□ -0.34
HMBOX1-205ENST00000518080 SHANK3Q9BYB0 1731 aa12.91□□□□□ -0.34
HMBOX1-205ENST00000518080 NUTM2BA6NNL0 878 aaPredicted RBP12.91□□□□□ -0.34
HMBOX1-205ENST00000518080 NUTM2EB1AL46 878 aaPredicted RBP12.91□□□□□ -0.34
HMBOX1-205ENST00000518080 TEFQ10587 303 aa12.91□□□□□ -0.34
HMBOX1-205ENST00000518080 NUTM2AQ8IVF1 878 aaPredicted RBP12.91□□□□□ -0.34
HMBOX1-205ENST00000518080 BTG4Q9NY30 223 aa12.91□□□□□ -0.34
HMBOX1-205ENST00000518080 ADAMTS7Q9UKP4 1686 aa12.91□□□□□ -0.34
HMBOX1-205ENST00000518080 JCADQ9P266 1359 aa12.91□□□□□ -0.34
HMBOX1-205ENST00000518080 PLIN1O60240 522 aa12.9□□□□□ -0.34
HMBOX1-205ENST00000518080 ADAMTS2O95450 1211 aa12.9□□□□□ -0.34
HMBOX1-205ENST00000518080 ZNF853P0CG23 659 aa12.9□□□□□ -0.34
HMBOX1-205ENST00000518080 RARSP54136 660 aaKnown RBP12.9□□□□□ -0.34
HMBOX1-205ENST00000518080 PELP1Q8IZL8 1130 aaKnown RBP12.9□□□□□ -0.34
HMBOX1-205ENST00000518080 FRAT1Q92837 279 aaPredicted RBP12.9□□□□□ -0.34
HMBOX1-205ENST00000518080 BCL2L13Q9BXK5 485 aa12.9□□□□□ -0.34
HMBOX1-205ENST00000518080 CACNA1FO60840 1977 aa12.9□□□□□ -0.34
HMBOX1-205ENST00000518080 KIF16BQ96L93 1317 aa12.89□□□□□ -0.35
HMBOX1-205ENST00000518080 BCAR3O75815 825 aa12.89□□□□□ -0.35
HMBOX1-205ENST00000518080 TWISTNBQ3B726 338 aaPredicted RBP12.89□□□□□ -0.35
HMBOX1-205ENST00000518080 ZNF428Q96B54 188 aa12.89□□□□□ -0.35
HMBOX1-205ENST00000518080 CARD10Q9BWT7 1032 aa12.89□□□□□ -0.35
HMBOX1-205ENST00000518080 PPP4R2Q9NY27 417 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms