RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 MEGF6O75095 1541 aa13.91□□□□□ -0.18
PABPC1-203ENST00000517921 MSH5O43196 834 aa13.91□□□□□ -0.18
PABPC1-203ENST00000517921 WWC1Q8IX03 1113 aa13.91□□□□□ -0.18
PABPC1-203ENST00000517921 ADAMTS7Q9UKP4 1686 aa13.91□□□□□ -0.18
PABPC1-203ENST00000517921 SIPA1L3O60292 1781 aaPredicted RBP13.91□□□□□ -0.18
PABPC1-203ENST00000517921 CSB-PGBD3P0DP91 1061 aa13.9□□□□□ -0.18
PABPC1-203ENST00000517921 RIPK4P57078 832 aa13.9□□□□□ -0.18
PABPC1-203ENST00000517921 FNBP4Q8N3X1 1017 aaPredicted RBP13.9□□□□□ -0.18
PABPC1-203ENST00000517921 TRIM35Q9UPQ4 493 aa13.9□□□□□ -0.18
PABPC1-203ENST00000517921 SLIT2O94813 1529 aa13.9□□□□□ -0.19
PABPC1-203ENST00000517921 PLEKHG2Q9H7P9 1386 aa13.89□□□□□ -0.19
PABPC1-203ENST00000517921 CDCA7LQ96GN5 454 aa13.89□□□□□ -0.19
PABPC1-203ENST00000517921 NLRP2Q9NX02 1062 aa13.89□□□□□ -0.19
PABPC1-203ENST00000517921 GOLGA2Q08379 1002 aa13.88□□□□□ -0.19
PABPC1-203ENST00000517921 MTHFSDQ2M296 383 aaKnown RBP13.88□□□□□ -0.19
PABPC1-203ENST00000517921 BTG4Q9NY30 223 aa13.88□□□□□ -0.19
PABPC1-203ENST00000517921 CRB1P82279 1406 aa13.88□□□□□ -0.19
PABPC1-203ENST00000517921 WDR63Q8IWG1 891 aa13.87□□□□□ -0.19
PABPC1-203ENST00000517921 GAS2L2Q8NHY3 880 aa13.87□□□□□ -0.19
PABPC1-203ENST00000517921 OVOS2A0A0G2JMS6 1433 aa13.87□□□□□ -0.19
PABPC1-203ENST00000517921 SLFN5Q08AF3 891 aa13.86□□□□□ -0.19
PABPC1-203ENST00000517921 LMOD3Q0VAK6 560 aa13.86□□□□□ -0.19
PABPC1-203ENST00000517921 LARP1Q6PKG0 1096 aaKnown RBP13.86□□□□□ -0.19
PABPC1-203ENST00000517921 PIAS4Q8N2W9 510 aaPredicted RBP13.86□□□□□ -0.19
PABPC1-203ENST00000517921 SPINK5Q9NQ38 1064 aaPredicted RBP13.86□□□□□ -0.19
PABPC1-203ENST00000517921 STRN4Q9NRL3 753 aa13.86□□□□□ -0.19
PABPC1-203ENST00000517921 KDM3BQ7LBC6 1761 aa13.86□□□□□ -0.19
PABPC1-203ENST00000517921 MAP3K5Q99683 1374 aa13.85□□□□□ -0.19
PABPC1-203ENST00000517921 TOM1L2Q6ZVM7 507 aa13.85□□□□□ -0.19
PABPC1-203ENST00000517921 TRMT2AQ8IZ69 625 aaKnown RBP13.85□□□□□ -0.19
PABPC1-203ENST00000517921 UPF1Q92900 1129 aaKnown RBP eCLIP13.85□□□□□ -0.19
PABPC1-203ENST00000517921 CARD10Q9BWT7 1032 aa13.85□□□□□ -0.19
PABPC1-203ENST00000517921 E9PSI1 815 aa13.84□□□□□ -0.19
PABPC1-203ENST00000517921 EVA1CP58658 441 aa13.84□□□□□ -0.19
PABPC1-203ENST00000517921 DUSP27Q5VZP5 1158 aa13.84□□□□□ -0.19
PABPC1-203ENST00000517921 UNC5CLQ8IV45 518 aa13.84□□□□□ -0.19
PABPC1-203ENST00000517921 IL16Q14005 1332 aa13.84□□□□□ -0.19
PABPC1-203ENST00000517921 DISP2A7MBM2 1401 aa13.83□□□□□ -0.2
PABPC1-203ENST00000517921 RAPGEF4Q8WZA2 1011 aa13.83□□□□□ -0.2
PABPC1-203ENST00000517921 GJD4Q96KN9 370 aaPredicted RBP13.83□□□□□ -0.2
PABPC1-203ENST00000517921 THUMPD2Q9BTF0 503 aaKnown RBP13.83□□□□□ -0.2
PABPC1-203ENST00000517921 TOGARAM1Q9Y4F4 1720 aa13.83□□□□□ -0.2
PABPC1-203ENST00000517921 KAT6BQ8WYB5 2073 aa13.83□□□□□ -0.2
PABPC1-203ENST00000517921 RGS12O14924 1447 aa13.82□□□□□ -0.2
PABPC1-203ENST00000517921 ATRNO75882 1429 aa13.82□□□□□ -0.2
PABPC1-203ENST00000517921 TATP17735 454 aaPredicted RBP13.82□□□□□ -0.2
PABPC1-203ENST00000517921 AMOTQ4VCS5 1084 aa13.82□□□□□ -0.2
PABPC1-203ENST00000517921 PLEKHO1Q53GL0 409 aaPredicted RBP13.82□□□□□ -0.2
PABPC1-203ENST00000517921 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
PABPC1-203ENST00000517921 ITGB4P16144 1822 aa13.82□□□□□ -0.2
PABPC1-203ENST00000517921 BCL9LQ86UU0 1499 aa13.81□□□□□ -0.2
PABPC1-203ENST00000517921 HTATSF1O43719 755 aaKnown RBP13.81□□□□□ -0.2
PABPC1-203ENST00000517921 DCTN1Q14203 1278 aa13.81□□□□□ -0.2
PABPC1-203ENST00000517921 ZNF530Q6P9A1 599 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-203ENST00000517921 CACNA1FO60840 1977 aa13.8□□□□□ -0.2
PABPC1-203ENST00000517921 GNAT3A8MTJ3 354 aa13.8□□□□□ -0.2
PABPC1-203ENST00000517921 CALD1Q05682 793 aaKnown RBP13.8□□□□□ -0.2
PABPC1-203ENST00000517921 MCM10Q7L590 875 aa13.8□□□□□ -0.2
PABPC1-203ENST00000517921 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.8□□□□□ -0.22e-23■□□□□ 9.5
PABPC1-203ENST00000517921 FANCIQ9NVI1 1328 aa13.8□□□□□ -0.2
PABPC1-203ENST00000517921 IL2RBP14784 551 aa13.79□□□□□ -0.2
PABPC1-203ENST00000517921 ADRA2BP18089 450 aa13.79□□□□□ -0.2
PABPC1-203ENST00000517921 AKAP4Q5JQC9 854 aa13.79□□□□□ -0.2
PABPC1-203ENST00000517921 CEMIPQ8WUJ3 1361 aa13.79□□□□□ -0.2
PABPC1-203ENST00000517921 MRC1P22897 1456 aa13.79□□□□□ -0.2
PABPC1-203ENST00000517921 THSD7AQ9UPZ6 1657 aa13.79□□□□□ -0.2
PABPC1-203ENST00000517921 ZNF853P0CG23 659 aa13.78□□□□□ -0.2
PABPC1-203ENST00000517921 RTF1Q92541 710 aaKnown RBP13.78□□□□□ -0.2
PABPC1-203ENST00000517921 TSR2Q969E8 191 aaKnown RBP13.78□□□□□ -0.2
PABPC1-203ENST00000517921 MYH16Q9H6N6 1097 aa13.78□□□□□ -0.2
PABPC1-203ENST00000517921 IFT57Q9NWB7 429 aa13.78□□□□□ -0.2
PABPC1-203ENST00000517921 SPG7Q9UQ90 795 aa13.78□□□□□ -0.2
PABPC1-203ENST00000517921 SPATA31A1Q5TZJ5 1347 aa13.78□□□□□ -0.2
PABPC1-203ENST00000517921 KDM6AO15550 1401 aaPredicted RBP13.78□□□□□ -0.2
PABPC1-203ENST00000517921 GLI3P10071 1580 aa13.78□□□□□ -0.2
PABPC1-203ENST00000517921 DOT1LQ8TEK3 1739 aa13.78□□□□□ -0.2
PABPC1-203ENST00000517921 PAPPAQ13219 1627 aa13.77□□□□□ -0.21
PABPC1-203ENST00000517921 VPS72Q15906 364 aa13.77□□□□□ -0.21
PABPC1-203ENST00000517921 C1orf141Q5JVX7 400 aa13.77□□□□□ -0.21
PABPC1-203ENST00000517921 SPATA31A5Q5VU36 1347 aa13.77□□□□□ -0.21
PABPC1-203ENST00000517921 TNS2Q63HR2 1409 aa13.77□□□□□ -0.21
PABPC1-203ENST00000517921 SPATA31A7Q8IWB4 1347 aa13.77□□□□□ -0.21
PABPC1-203ENST00000517921 IL17REQ8NFR9 667 aa13.77□□□□□ -0.21
PABPC1-203ENST00000517921 USP35Q9P2H5 1018 aa13.77□□□□□ -0.21
PABPC1-203ENST00000517921 GNAI1P63096 354 aa13.76□□□□□ -0.21
PABPC1-203ENST00000517921 CFAP44Q96MT7 982 aa13.76□□□□□ -0.21
PABPC1-203ENST00000517921 UBR2Q8IWV8 1755 aa13.76□□□□□ -0.21
PABPC1-203ENST00000517921 PCDH11XQ9BZA7 1347 aa13.75□□□□□ -0.21
PABPC1-203ENST00000517921 PCDH11YQ9BZA8 1340 aa13.75□□□□□ -0.21
PABPC1-203ENST00000517921 A0A0G2JS52 829 aa13.75□□□□□ -0.21
PABPC1-203ENST00000517921 CYP27B1O15528 508 aa13.75□□□□□ -0.21
PABPC1-203ENST00000517921 PHKG2P15735 406 aa13.75□□□□□ -0.21
PABPC1-203ENST00000517921 MYT1Q01538 1121 aa13.75□□□□□ -0.21
PABPC1-203ENST00000517921 ZCRB1Q8TBF4 217 aaKnown RBP13.75□□□□□ -0.21
PABPC1-203ENST00000517921 THRAP3Q9Y2W1 955 aaKnown RBP13.75□□□□□ -0.21
PABPC1-203ENST00000517921 RNMTO43148 476 aaKnown RBP13.74□□□□□ -0.21
PABPC1-203ENST00000517921 IFNL2Q8IZJ0 200 aa13.74□□□□□ -0.21
PABPC1-203ENST00000517921 LGR6Q9HBX8 967 aa13.74□□□□□ -0.21
PABPC1-203ENST00000517921 MBIPQ9NS73 344 aa13.74□□□□□ -0.21
PABPC1-203ENST00000517921 RCAN3Q9UKA8 241 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms