RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 ZNF428Q96B54 188 aa5.62□□□□□ -1.51
RNU6-840P-201ENST00000517275 KCTD12Q96CX2 325 aaKnown RBP5.62□□□□□ -1.51
RNU6-840P-201ENST00000517275 IGSF5Q9NSI5 407 aa5.62□□□□□ -1.51
RNU6-840P-201ENST00000517275 ITGBL1O95965 494 aaPredicted RBP5.61□□□□□ -1.51
RNU6-840P-201ENST00000517275 S1PR4O95977 384 aa5.61□□□□□ -1.51
RNU6-840P-201ENST00000517275 NOM1Q5C9Z4 860 aaKnown RBP5.61□□□□□ -1.51
RNU6-840P-201ENST00000517275 MPNDQ8N594 471 aa5.61□□□□□ -1.51
RNU6-840P-201ENST00000517275 TPCN2Q8NHX9 752 aa5.61□□□□□ -1.51
RNU6-840P-201ENST00000517275 TRIM52Q96A61 297 aa5.61□□□□□ -1.51
RNU6-840P-201ENST00000517275 ICMTO60725 284 aa5.6□□□□□ -1.51
RNU6-840P-201ENST00000517275 VARSP26640 1264 aaKnown RBP5.6□□□□□ -1.51
RNU6-840P-201ENST00000517275 ERVK-9P63128 1117 aa5.6□□□□□ -1.51
RNU6-840P-201ENST00000517275 COL19A1Q14993 1142 aa5.6□□□□□ -1.51
RNU6-840P-201ENST00000517275 LINC01559Q495D7 138 aa5.6□□□□□ -1.51
RNU6-840P-201ENST00000517275 PCDHB11Q9Y5F2 797 aa5.6□□□□□ -1.51
RNU6-840P-201ENST00000517275 FOXO3O43524 673 aa5.59□□□□□ -1.51
RNU6-840P-201ENST00000517275 C21orf2O43822 256 aa5.59□□□□□ -1.51
RNU6-840P-201ENST00000517275 PTCD1O75127 700 aaKnown RBP5.59□□□□□ -1.51
RNU6-840P-201ENST00000517275 TRIM32Q13049 653 aa5.59□□□□□ -1.51
RNU6-840P-201ENST00000517275 SF3B2Q13435 895 aaKnown RBP5.59□□□□□ -1.51
RNU6-840P-201ENST00000517275 AGERQ15109 404 aa5.59□□□□□ -1.51
RNU6-840P-201ENST00000517275 INTS6LQ5JSJ4 861 aaKnown RBP5.59□□□□□ -1.51
RNU6-840P-201ENST00000517275 NPAS4Q8IUM7 802 aa5.59□□□□□ -1.51
RNU6-840P-201ENST00000517275 ANKLE1Q8NAG6 615 aa5.59□□□□□ -1.51
RNU6-840P-201ENST00000517275 RBM19Q9Y4C8 960 aaKnown RBP5.59□□□□□ -1.51
RNU6-840P-201ENST00000517275 SFI1A8K8P3 1242 aa5.58□□□□□ -1.52
RNU6-840P-201ENST00000517275 PRMT3O60678 531 aa5.58□□□□□ -1.52
RNU6-840P-201ENST00000517275 NPR3P17342 541 aa5.58□□□□□ -1.52
RNU6-840P-201ENST00000517275 IGFBP4P22692 258 aa5.58□□□□□ -1.52
RNU6-840P-201ENST00000517275 VAMP1P23763 118 aa5.58□□□□□ -1.52
RNU6-840P-201ENST00000517275 RPIAP49247 311 aa5.58□□□□□ -1.52
RNU6-840P-201ENST00000517275 CDK15Q96Q40 435 aa5.58□□□□□ -1.52
RNU6-840P-201ENST00000517275 KCTD15Q96SI1 283 aaPredicted RBP5.58□□□□□ -1.52
RNU6-840P-201ENST00000517275 UNCXA6NJT0 531 aa5.57□□□□□ -1.52
RNU6-840P-201ENST00000517275 TMEM229AB2RXF0 380 aa5.57□□□□□ -1.52
RNU6-840P-201ENST00000517275 MYCP01106 439 aaPredicted RBP5.57□□□□□ -1.52
RNU6-840P-201ENST00000517275 EPHA4P54764 986 aa5.57□□□□□ -1.52
RNU6-840P-201ENST00000517275 MARSP56192 900 aaKnown RBP5.57□□□□□ -1.52
RNU6-840P-201ENST00000517275 ECM1Q16610 540 aa5.57□□□□□ -1.52
RNU6-840P-201ENST00000517275 POTEAQ6S8J7 498 aa5.57□□□□□ -1.52
RNU6-840P-201ENST00000517275 GAS2L2Q8NHY3 880 aa5.57□□□□□ -1.52
RNU6-840P-201ENST00000517275 H3BRB1 525 aa5.56□□□□□ -1.52
RNU6-840P-201ENST00000517275 ZNF16P17020 682 aaPredicted RBP5.56□□□□□ -1.52
RNU6-840P-201ENST00000517275 SCNN1DP51172 638 aa5.56□□□□□ -1.52
RNU6-840P-201ENST00000517275 PSME1Q06323 249 aa5.56□□□□□ -1.52
RNU6-840P-201ENST00000517275 FKBP5Q13451 457 aaPredicted RBP5.56□□□□□ -1.52
RNU6-840P-201ENST00000517275 CC2D2BQ6DHV5 1058 aa5.56□□□□□ -1.52
RNU6-840P-201ENST00000517275 STAG2Q8N3U4 1231 aa5.56□□□□□ -1.52
RNU6-840P-201ENST00000517275 NKX2-3Q8TAU0 364 aa5.56□□□□□ -1.52
RNU6-840P-201ENST00000517275 HELQQ8TDG4 1101 aa5.56□□□□□ -1.52
RNU6-840P-201ENST00000517275 ASB16Q96NS5 453 aa5.56□□□□□ -1.52
RNU6-840P-201ENST00000517275 TUT1Q9H6E5 874 aaKnown RBP5.56□□□□□ -1.52
RNU6-840P-201ENST00000517275 ZNF358Q9NW07 568 aa5.56□□□□□ -1.52
RNU6-840P-201ENST00000517275 ERVH48-1M5A8F1 160 aa5.55□□□□□ -1.52
RNU6-840P-201ENST00000517275 SCTRP47872 440 aa5.55□□□□□ -1.52
RNU6-840P-201ENST00000517275 SKOR1P84550 965 aa5.55□□□□□ -1.52
RNU6-840P-201ENST00000517275 ARHGAP4P98171 946 aa5.55□□□□□ -1.52
RNU6-840P-201ENST00000517275 DHX9Q08211 1270 aaKnown RBP5.55□□□□□ -1.52
RNU6-840P-201ENST00000517275 FBXO33Q7Z6M2 555 aa5.55□□□□□ -1.52
RNU6-840P-201ENST00000517275 GLYCTKQ8IVS8 523 aa5.55□□□□□ -1.52
RNU6-840P-201ENST00000517275 TSEN2Q8NCE0 465 aaKnown RBP5.55□□□□□ -1.52
RNU6-840P-201ENST00000517275 SLC4A9Q96Q91 983 aa5.55□□□□□ -1.52
RNU6-840P-201ENST00000517275 OSBPL3Q9H4L5 887 aa5.55□□□□□ -1.52
RNU6-840P-201ENST00000517275 DCTN4Q9UJW0 460 aa5.55□□□□□ -1.52
RNU6-840P-201ENST00000517275 RNF223E7ERA6 249 aa5.54□□□□□ -1.52
RNU6-840P-201ENST00000517275 BACH1O14867 736 aa5.54□□□□□ -1.52
RNU6-840P-201ENST00000517275 SCNN1AP37088 669 aa5.54□□□□□ -1.52
RNU6-840P-201ENST00000517275 PTPN5P54829 565 aa5.54□□□□□ -1.52
RNU6-840P-201ENST00000517275 PLA2G2CQ5R387 149 aa5.54□□□□□ -1.52
RNU6-840P-201ENST00000517275 VASH1Q7L8A9 365 aaPredicted RBP5.54□□□□□ -1.52
RNU6-840P-201ENST00000517275 RGL4Q8IZJ4 473 aa5.54□□□□□ -1.52
RNU6-840P-201ENST00000517275 PRIMPOLQ96LW4 560 aa5.54□□□□□ -1.52
RNU6-840P-201ENST00000517275 KIAA1522Q9P206 1035 aaPredicted RBP5.54□□□□□ -1.52
RNU6-840P-201ENST00000517275 DNMT3AQ9Y6K1 912 aaPredicted RBP5.54□□□□□ -1.52
RNU6-840P-201ENST00000517275 ANKRD33BA6NCL7 494 aa5.53□□□□□ -1.52
RNU6-840P-201ENST00000517275 ZBTB24O43167 697 aaPredicted RBP5.53□□□□□ -1.52
RNU6-840P-201ENST00000517275 GGCXP38435 758 aa5.53□□□□□ -1.52
RNU6-840P-201ENST00000517275 FOXK2Q01167 660 aa5.53□□□□□ -1.52
RNU6-840P-201ENST00000517275 FKBP4Q02790 459 aaKnown RBP eCLIP5.53□□□□□ -1.52
RNU6-840P-201ENST00000517275 KCNC4Q03721 635 aa5.53□□□□□ -1.52
RNU6-840P-201ENST00000517275 ZNF211Q13398 564 aaPredicted RBP5.53□□□□□ -1.52
RNU6-840P-201ENST00000517275 MTFR1Q15390 333 aa5.53□□□□□ -1.52
RNU6-840P-201ENST00000517275 GTF3C2Q8WUA4 911 aaPredicted RBP5.53□□□□□ -1.52
RNU6-840P-201ENST00000517275 BCL2L13Q9BXK5 485 aa5.53□□□□□ -1.52
RNU6-840P-201ENST00000517275 GNRH1P01148 92 aa5.52□□□□□ -1.53
RNU6-840P-201ENST00000517275 INHAP05111 366 aa5.52□□□□□ -1.53
RNU6-840P-201ENST00000517275 GDF10P55107 478 aa5.52□□□□□ -1.53
RNU6-840P-201ENST00000517275 CYP2U1Q7Z449 544 aa5.52□□□□□ -1.53
RNU6-840P-201ENST00000517275 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.52□□□□□ -1.53
RNU6-840P-201ENST00000517275 MRRFQ96E11 262 aaKnown RBP5.52□□□□□ -1.53
RNU6-840P-201ENST00000517275 RBCK1Q9BYM8 510 aa5.52□□□□□ -1.53
RNU6-840P-201ENST00000517275 BIN2Q9UBW5 565 aaPredicted RBP5.52□□□□□ -1.53
RNU6-840P-201ENST00000517275 SEPT3Q9UH03 358 aa5.52□□□□□ -1.53
RNU6-840P-201ENST00000517275 SIAH2O43255 324 aa5.51□□□□□ -1.53
RNU6-840P-201ENST00000517275 LILRA1O75019 489 aa5.51□□□□□ -1.53
RNU6-840P-201ENST00000517275 ADH1CP00326 375 aa5.51□□□□□ -1.53
RNU6-840P-201ENST00000517275 ABL1P00519 1130 aa5.51□□□□□ -1.53
RNU6-840P-201ENST00000517275 FSHRP23945 695 aa5.51□□□□□ -1.53
RNU6-840P-201ENST00000517275 GRM5P41594 1212 aa5.51□□□□□ -1.53
RNU6-840P-201ENST00000517275 HIRAP54198 1017 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms