RNA–Protein interactions for RNA: ENST00000516622.1

RNU6-1247P-201, Transcript of RNA, U6 small nuclear 1247, pseudogene, humanhuman

BASIC

Gene RNU6-1247P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1247P-201ENST00000516622 BHMG1C9JSJ3 638 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 ST18O60284 1047 aa-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 POTEJP0CG39 1038 aa-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 HOXD11P31277 338 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 RFX5P48382 616 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 POU5F1Q01860 360 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 G3BP1Q13283 466 aaKnown RBP eCLIP-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 COL19A1Q14993 1142 aa-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 DMRTA1Q5VZB9 504 aa-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 ISM2Q6H9L7 571 aa-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 KANK3Q6NY19 840 aa-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 PTF1AQ7RTS3 328 aa-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 UPF1Q92900 1129 aaKnown RBP eCLIP-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 RELTQ969Z4 430 aa-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 CITED2Q99967 270 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 SYT3Q9BQG1 590 aa-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 PIGQQ9BRB3 760 aa-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 SH2B1Q9NRF2 756 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 RNF19AQ9NV58 838 aa-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 KCNK4Q9NYG8 393 aa-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 VPS9D1Q9Y2B5 631 aa-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 ATF5Q9Y2D1 282 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 CDH23Q9H251 3354 aa-0.72□□□□□ -2.52
RNU6-1247P-201ENST00000516622 DNAH6Q9C0G6 4158 aa-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 ATMQ13315 3056 aa-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 PSPNO60542 156 aa-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 CAPN15O75808 1086 aa-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 LY6G6DO95868 133 aa-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 CD6P30203 668 aa-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 ZXDAP98168 799 aa-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 PURAQ00577 322 aaKnown RBP-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 KRTAP13-4Q3LI77 160 aa-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 ZDHHC5Q9C0B5 715 aa-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 KDM4CQ9H3R0 1056 aa-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 UNKLQ9H9P5 680 aaKnown RBP-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 PLSCR4Q9NRQ2 329 aa-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 ARMCX1Q9P291 453 aa-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 ZNF214Q9UL59 606 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 WASF2Q9Y6W5 498 aa-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 LTBP1Q14766 1721 aa-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 BRCA2P51587 3418 aa-0.73□□□□□ -2.53
RNU6-1247P-201ENST00000516622 SRFP11831 508 aa-0.74□□□□□ -2.53
RNU6-1247P-201ENST00000516622 ASIPP42127 132 aa-0.74□□□□□ -2.53
RNU6-1247P-201ENST00000516622 GRSF1Q12849 480 aaKnown RBP eCLIP-0.74□□□□□ -2.53
RNU6-1247P-201ENST00000516622 NFYCQ13952 458 aa-0.74□□□□□ -2.53
RNU6-1247P-201ENST00000516622 CTU2Q2VPK5 515 aaKnown RBP-0.74□□□□□ -2.53
RNU6-1247P-201ENST00000516622 C11orf87Q6NUJ2 197 aa-0.74□□□□□ -2.53
RNU6-1247P-201ENST00000516622 NFATC2IPQ8NCF5 419 aa-0.74□□□□□ -2.53
RNU6-1247P-201ENST00000516622 DNERQ8NFT8 737 aa-0.74□□□□□ -2.53
RNU6-1247P-201ENST00000516622 LCORQ96JN0 433 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-1247P-201ENST00000516622 TNIP3Q96KP6 325 aa-0.74□□□□□ -2.53
RNU6-1247P-201ENST00000516622 ADAMTS8Q9UP79 889 aa-0.74□□□□□ -2.53
RNU6-1247P-201ENST00000516622 BRWD3Q6RI45 1802 aa-0.74□□□□□ -2.53
RNU6-1247P-201ENST00000516622 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 NBASA2RRP1 2371 aa-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 SPTA1P02549 2419 aa-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 PYCARD-AS1I3L0S3 204 aa-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 HNRNPA1P09651 372 aaKnown RBP eCLIP-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 NCLP19338 710 aaKnown RBP-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 CCR10P46092 362 aa-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 TSGA10IPQ3SY00 556 aa-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 MAFAQ8NHW3 353 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 ZNF398Q8TD17 642 aa-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 NELL1Q92832 810 aa-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 MESP1Q9BRJ9 268 aa-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 RCOR3Q9P2K3 495 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 ZBTB47Q9UFB7 747 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 CENPFP49454 3210 aa-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 DNAH14Q0VDD8 3507 aa-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 THSD7BQ9C0I4 1608 aa-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 COL4A1P02462 1669 aa-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 HTTP42858 3142 aa-0.75□□□□□ -2.53
RNU6-1247P-201ENST00000516622 DNAH11Q96DT5 4516 aa-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 ARHGAP6O43182 974 aa-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 C7P10643 843 aa-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 CEBPAP49715 358 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 MRE11P49959 708 aa-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 RNPS1Q15287 305 aaKnown RBP-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 AMHR2Q16671 573 aa-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 PHF19Q5T6S3 580 aa-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 ZDHHC14Q8IZN3 488 aa-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 CFAP44Q96MT7 982 aa-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 SPRY4Q9C004 299 aa-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 GSX1Q9H4S2 264 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 GOLGA2P5Q9HBQ8 144 aa-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 ABCB10Q9NRK6 738 aa-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 PEF1Q9UBV8 284 aaKnown RBP-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 Q9UF83 564 aa-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 PLA2G2DQ9UNK4 145 aa-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 KCPQ6ZWJ8 1503 aa-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 CEP250Q9BV73 2442 aa-0.76□□□□□ -2.53
RNU6-1247P-201ENST00000516622 CSPG4Q6UVK1 2322 aa-0.77□□□□□ -2.53
RNU6-1247P-201ENST00000516622 CCDC188H7C350 402 aa-0.77□□□□□ -2.53
RNU6-1247P-201ENST00000516622 IRS4O14654 1257 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-1247P-201ENST00000516622 SNAI1O95863 264 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-1247P-201ENST00000516622 GRNP28799 593 aaKnown RBP-0.77□□□□□ -2.53
RNU6-1247P-201ENST00000516622 EFNA3P52797 238 aa-0.77□□□□□ -2.53
RNU6-1247P-201ENST00000516622 MTMR1Q13613 665 aa-0.77□□□□□ -2.53
RNU6-1247P-201ENST00000516622 KRTAP6-2Q3LI66 62 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms