RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 GNAT3A8MTJ3 354 aa9.88□□□□□ -0.83
SCARNA20.1-201ENST00000516009 EXOSC9Q06265 439 aaKnown RBP9.88□□□□□ -0.83
SCARNA20.1-201ENST00000516009 PLEKHO1Q53GL0 409 aaPredicted RBP9.88□□□□□ -0.83
SCARNA20.1-201ENST00000516009 CFAP44Q96MT7 982 aa9.88□□□□□ -0.83
SCARNA20.1-201ENST00000516009 NLRP2Q9NX02 1062 aa9.88□□□□□ -0.83
SCARNA20.1-201ENST00000516009 COL14A1Q05707 1796 aaKnown RBP9.88□□□□□ -0.83
SCARNA20.1-201ENST00000516009 COL5A2P05997 1499 aaPredicted RBP9.87□□□□□ -0.83
SCARNA20.1-201ENST00000516009 UBAP1LF5GYI3 381 aa9.87□□□□□ -0.83
SCARNA20.1-201ENST00000516009 ZNF853P0CG23 659 aa9.87□□□□□ -0.83
SCARNA20.1-201ENST00000516009 PIP4K2BP78356 416 aa9.87□□□□□ -0.83
SCARNA20.1-201ENST00000516009 AMOTQ4VCS5 1084 aa9.87□□□□□ -0.83
SCARNA20.1-201ENST00000516009 MCM10Q7L590 875 aa9.87□□□□□ -0.83
SCARNA20.1-201ENST00000516009 PARP4Q9UKK3 1724 aaKnown RBP9.87□□□□□ -0.83
SCARNA20.1-201ENST00000516009 PLIN1O60240 522 aa9.86□□□□□ -0.83
SCARNA20.1-201ENST00000516009 RARSP54136 660 aaKnown RBP9.86□□□□□ -0.83
SCARNA20.1-201ENST00000516009 CRB1P82279 1406 aa9.86□□□□□ -0.83
SCARNA20.1-201ENST00000516009 RAPGEF4Q8WZA2 1011 aa9.86□□□□□ -0.83
SCARNA20.1-201ENST00000516009 MBIPQ9NS73 344 aa9.86□□□□□ -0.83
SCARNA20.1-201ENST00000516009 PPP4R2Q9NY27 417 aa9.86□□□□□ -0.83
SCARNA20.1-201ENST00000516009 PLEKHG2Q9H7P9 1386 aa9.86□□□□□ -0.83
SCARNA20.1-201ENST00000516009 WDR17Q8IZU2 1322 aa9.85□□□□□ -0.83
SCARNA20.1-201ENST00000516009 PKD1L3Q7Z443 1732 aa9.85□□□□□ -0.83
SCARNA20.1-201ENST00000516009 BCAR3O75815 825 aa9.85□□□□□ -0.83
SCARNA20.1-201ENST00000516009 TATP17735 454 aaPredicted RBP9.85□□□□□ -0.83
SCARNA20.1-201ENST00000516009 CANXP27824 592 aaKnown RBP9.85□□□□□ -0.83
SCARNA20.1-201ENST00000516009 ZNF530Q6P9A1 599 aaPredicted RBP9.85□□□□□ -0.83
SCARNA20.1-201ENST00000516009 ZNF428Q96B54 188 aa9.85□□□□□ -0.83
SCARNA20.1-201ENST00000516009 SCN11AQ9UI33 1791 aa9.84□□□□□ -0.83
SCARNA20.1-201ENST00000516009 CHL1O00533 1208 aa9.84□□□□□ -0.83
SCARNA20.1-201ENST00000516009 EVA1CP58658 441 aa9.84□□□□□ -0.83
SCARNA20.1-201ENST00000516009 AKAP4Q5JQC9 854 aa9.84□□□□□ -0.83
SCARNA20.1-201ENST00000516009 C1orf141Q5JVX7 400 aa9.84□□□□□ -0.83
SCARNA20.1-201ENST00000516009 TOM1L2Q6ZVM7 507 aa9.84□□□□□ -0.83
SCARNA20.1-201ENST00000516009 PLCH1Q4KWH8 1693 aa9.83□□□□□ -0.84
SCARNA20.1-201ENST00000516009 OVOS2A0A0G2JMS6 1433 aa9.83□□□□□ -0.84
SCARNA20.1-201ENST00000516009 MEGF6O75095 1541 aa9.83□□□□□ -0.84
SCARNA20.1-201ENST00000516009 ALDH1L2Q3SY69 923 aa9.83□□□□□ -0.84
SCARNA20.1-201ENST00000516009 IL17REQ8NFR9 667 aa9.83□□□□□ -0.84
SCARNA20.1-201ENST00000516009 CERKQ8TCT0 537 aa9.83□□□□□ -0.84
SCARNA20.1-201ENST00000516009 SMC4Q9NTJ3 1288 aa9.83□□□□□ -0.84
SCARNA20.1-201ENST00000516009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.83□□□□□ -0.84
SCARNA20.1-201ENST00000516009 TSPYL4Q9UJ04 414 aa9.83□□□□□ -0.84
SCARNA20.1-201ENST00000516009 SPG7Q9UQ90 795 aa9.83□□□□□ -0.84
SCARNA20.1-201ENST00000516009 ADAMTS7Q9UKP4 1686 aa9.83□□□□□ -0.84
SCARNA20.1-201ENST00000516009 SIPA1L3O60292 1781 aaPredicted RBP9.83□□□□□ -0.84
SCARNA20.1-201ENST00000516009 KDM3BQ7LBC6 1761 aa9.83□□□□□ -0.84
SCARNA20.1-201ENST00000516009 PDE3AQ14432 1141 aa9.82□□□□□ -0.84
SCARNA20.1-201ENST00000516009 TAF7Q15545 349 aaPredicted RBP9.82□□□□□ -0.84
SCARNA20.1-201ENST00000516009 TWISTNBQ3B726 338 aaPredicted RBP9.82□□□□□ -0.84
SCARNA20.1-201ENST00000516009 EXOC6Q8TAG9 804 aa9.82□□□□□ -0.84
SCARNA20.1-201ENST00000516009 SSH1Q8WYL5 1049 aa9.82□□□□□ -0.84
SCARNA20.1-201ENST00000516009 FRAT1Q92837 279 aaPredicted RBP9.82□□□□□ -0.84
SCARNA20.1-201ENST00000516009 CRBNQ96SW2 442 aa9.82□□□□□ -0.84
SCARNA20.1-201ENST00000516009 CARD10Q9BWT7 1032 aa9.82□□□□□ -0.84
SCARNA20.1-201ENST00000516009 BCL2L13Q9BXK5 485 aa9.82□□□□□ -0.84
SCARNA20.1-201ENST00000516009 STRN4Q9NRL3 753 aa9.82□□□□□ -0.84
SCARNA20.1-201ENST00000516009 BABAM1Q9NWV8 329 aa9.82□□□□□ -0.84
SCARNA20.1-201ENST00000516009 CEMIPQ8WUJ3 1361 aa9.82□□□□□ -0.84
SCARNA20.1-201ENST00000516009 VAMP4O75379 141 aa9.81□□□□□ -0.84
SCARNA20.1-201ENST00000516009 C20orf194Q5TEA3 1177 aa9.81□□□□□ -0.84
SCARNA20.1-201ENST00000516009 C8orf58Q8NAV2 365 aa9.81□□□□□ -0.84
SCARNA20.1-201ENST00000516009 BTG4Q9NY30 223 aa9.81□□□□□ -0.84
SCARNA20.1-201ENST00000516009 CACNA1FO60840 1977 aa9.81□□□□□ -0.84
SCARNA20.1-201ENST00000516009 KIF16BQ96L93 1317 aa9.81□□□□□ -0.84
SCARNA20.1-201ENST00000516009 WNK3Q9BYP7 1800 aa9.8□□□□□ -0.84
SCARNA20.1-201ENST00000516009 NRAPQ86VF7 1730 aa9.8□□□□□ -0.84
SCARNA20.1-201ENST00000516009 NWD2Q9ULI1 1742 aa9.8□□□□□ -0.84
SCARNA20.1-201ENST00000516009 ELL2O00472 640 aaPredicted RBP9.8□□□□□ -0.84
SCARNA20.1-201ENST00000516009 MS4A1P11836 297 aa9.8□□□□□ -0.84
SCARNA20.1-201ENST00000516009 TEFQ10587 303 aa9.8□□□□□ -0.84
SCARNA20.1-201ENST00000516009 ZKSCAN2Q63HK3 967 aa9.8□□□□□ -0.84
SCARNA20.1-201ENST00000516009 LARP1Q6PKG0 1096 aaKnown RBP9.8□□□□□ -0.84
SCARNA20.1-201ENST00000516009 MPRIPQ6WCQ1 1025 aa9.8□□□□□ -0.84
SCARNA20.1-201ENST00000516009 TSPYL6Q8N831 410 aa9.8□□□□□ -0.84
SCARNA20.1-201ENST00000516009 CCDC136Q96JN2 1154 aa9.8□□□□□ -0.84
SCARNA20.1-201ENST00000516009 LGR6Q9HBX8 967 aa9.8□□□□□ -0.84
SCARNA20.1-201ENST00000516009 MIS18AQ9NYP9 233 aa9.8□□□□□ -0.84
SCARNA20.1-201ENST00000516009 SHANK3Q9BYB0 1731 aa9.79□□□□□ -0.84
SCARNA20.1-201ENST00000516009 IPO8O15397 1037 aaKnown RBP9.79□□□□□ -0.84
SCARNA20.1-201ENST00000516009 RNMTO43148 476 aaKnown RBP9.79□□□□□ -0.84
SCARNA20.1-201ENST00000516009 ADAMTS2O95450 1211 aa9.79□□□□□ -0.84
SCARNA20.1-201ENST00000516009 IL2RBP14784 551 aa9.79□□□□□ -0.84
SCARNA20.1-201ENST00000516009 PHKG2P15735 406 aa9.79□□□□□ -0.84
SCARNA20.1-201ENST00000516009 B4GALNT3Q6L9W6 998 aa9.79□□□□□ -0.84
SCARNA20.1-201ENST00000516009 IFNL2Q8IZJ0 200 aa9.79□□□□□ -0.84
SCARNA20.1-201ENST00000516009 PELP1Q8IZL8 1130 aaKnown RBP9.79□□□□□ -0.84
SCARNA20.1-201ENST00000516009 JCADQ9P266 1359 aa9.78□□□□□ -0.84
SCARNA20.1-201ENST00000516009 NUTM2BA6NNL0 878 aaPredicted RBP9.78□□□□□ -0.84
SCARNA20.1-201ENST00000516009 NUTM2EB1AL46 878 aaPredicted RBP9.78□□□□□ -0.84
SCARNA20.1-201ENST00000516009 HSP90AB1P08238 724 aaKnown RBP9.78□□□□□ -0.84
SCARNA20.1-201ENST00000516009 BRPF1P55201 1214 aaPredicted RBP9.78□□□□□ -0.84
SCARNA20.1-201ENST00000516009 NUTM2AQ8IVF1 878 aaPredicted RBP9.78□□□□□ -0.84
SCARNA20.1-201ENST00000516009 PANK1Q8TE04 598 aa9.78□□□□□ -0.84
SCARNA20.1-201ENST00000516009 SOS1Q07889 1333 aaPredicted RBP9.78□□□□□ -0.84
SCARNA20.1-201ENST00000516009 KDM6AO15550 1401 aaPredicted RBP9.77□□□□□ -0.85
SCARNA20.1-201ENST00000516009 BTBD11A6QL63 1104 aa9.77□□□□□ -0.85
SCARNA20.1-201ENST00000516009 KRT24Q2M2I5 525 aa9.77□□□□□ -0.85
SCARNA20.1-201ENST00000516009 ATF7IPQ6VMQ6 1270 aa9.77□□□□□ -0.85
SCARNA20.1-201ENST00000516009 FTSJ3Q8IY81 847 aaKnown RBP9.77□□□□□ -0.85
SCARNA20.1-201ENST00000516009 MRPL50Q8N5N7 158 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms