RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 PURBQ96QR8 312 aaKnown RBP6.84□□□□□ -1.31
RNU6-488P-201ENST00000515918 C21orf2O43822 256 aa6.83□□□□□ -1.32
RNU6-488P-201ENST00000515918 ADH1BP00325 375 aa6.83□□□□□ -1.32
RNU6-488P-201ENST00000515918 TCF3P15923 654 aa6.83□□□□□ -1.32
RNU6-488P-201ENST00000515918 ARHGAP4P98171 946 aa6.83□□□□□ -1.32
RNU6-488P-201ENST00000515918 MTMR3Q13615 1198 aa6.83□□□□□ -1.32
RNU6-488P-201ENST00000515918 RNF20Q5VTR2 975 aa6.83□□□□□ -1.32
RNU6-488P-201ENST00000515918 GLYCTKQ8IVS8 523 aa6.83□□□□□ -1.32
RNU6-488P-201ENST00000515918 GAS2L2Q8NHY3 880 aa6.83□□□□□ -1.32
RNU6-488P-201ENST00000515918 HINFPQ9BQA5 517 aa6.83□□□□□ -1.32
RNU6-488P-201ENST00000515918 ZPR1O75312 459 aa6.82□□□□□ -1.32
RNU6-488P-201ENST00000515918 VAMP1P23763 118 aa6.82□□□□□ -1.32
RNU6-488P-201ENST00000515918 FKBP4Q02790 459 aaKnown RBP eCLIP6.82□□□□□ -1.32
RNU6-488P-201ENST00000515918 PSME1Q06323 249 aa6.82□□□□□ -1.32
RNU6-488P-201ENST00000515918 USP4Q13107 963 aa6.82□□□□□ -1.32
RNU6-488P-201ENST00000515918 FKBP5Q13451 457 aaPredicted RBP6.82□□□□□ -1.32
RNU6-488P-201ENST00000515918 LINC01559Q495D7 138 aa6.82□□□□□ -1.32
RNU6-488P-201ENST00000515918 ZNF326Q5BKZ1 582 aaKnown RBP6.82□□□□□ -1.32
RNU6-488P-201ENST00000515918 BPHLQ86WA6 291 aaPredicted RBP6.82□□□□□ -1.32
RNU6-488P-201ENST00000515918 TSEN2Q8NCE0 465 aaKnown RBP6.82□□□□□ -1.32
RNU6-488P-201ENST00000515918 ASB16Q96NS5 453 aa6.82□□□□□ -1.32
RNU6-488P-201ENST00000515918 MKNK1Q9BUB5 465 aa6.82□□□□□ -1.32
RNU6-488P-201ENST00000515918 C1QTNF2Q9BXJ5 285 aa6.82□□□□□ -1.32
RNU6-488P-201ENST00000515918 RBM19Q9Y4C8 960 aaKnown RBP6.82□□□□□ -1.32
RNU6-488P-201ENST00000515918 PCDHB11Q9Y5F2 797 aa6.82□□□□□ -1.32
RNU6-488P-201ENST00000515918 MAPK1P28482 360 aa6.81□□□□□ -1.32
RNU6-488P-201ENST00000515918 ANKRD13DQ6ZTN6 518 aa6.81□□□□□ -1.32
RNU6-488P-201ENST00000515918 ZNF511Q8NB15 262 aa6.81□□□□□ -1.32
RNU6-488P-201ENST00000515918 STAC3Q96MF2 364 aa6.81□□□□□ -1.32
RNU6-488P-201ENST00000515918 DCTN4Q9UJW0 460 aa6.81□□□□□ -1.32
RNU6-488P-201ENST00000515918 M0R2N6 131 aa6.8□□□□□ -1.32
RNU6-488P-201ENST00000515918 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.8□□□□□ -1.32
RNU6-488P-201ENST00000515918 RECKO95980 971 aa6.79□□□□□ -1.32
RNU6-488P-201ENST00000515918 SF3B2Q13435 895 aaKnown RBP6.79□□□□□ -1.32
RNU6-488P-201ENST00000515918 AGERQ15109 404 aa6.79□□□□□ -1.32
RNU6-488P-201ENST00000515918 SLC10A4Q96EP9 437 aa6.79□□□□□ -1.32
RNU6-488P-201ENST00000515918 PCDH10Q9P2E7 1040 aa6.79□□□□□ -1.32
RNU6-488P-201ENST00000515918 SCTRP47872 440 aa6.78□□□□□ -1.32
RNU6-488P-201ENST00000515918 NAA30Q147X3 362 aaPredicted RBP6.78□□□□□ -1.32
RNU6-488P-201ENST00000515918 TRMT44Q8IYL2 757 aaKnown RBP6.78□□□□□ -1.32
RNU6-488P-201ENST00000515918 SEPT12Q8IYM1 358 aa6.78□□□□□ -1.32
RNU6-488P-201ENST00000515918 ZNF516Q92618 1163 aa6.78□□□□□ -1.32
RNU6-488P-201ENST00000515918 MTRQ99707 1265 aa6.78□□□□□ -1.32
RNU6-488P-201ENST00000515918 SLC6A16Q9GZN6 736 aa6.78□□□□□ -1.32
RNU6-488P-201ENST00000515918 ZNF358Q9NW07 568 aa6.78□□□□□ -1.32
RNU6-488P-201ENST00000515918 TMEM229AB2RXF0 380 aa6.77□□□□□ -1.33
RNU6-488P-201ENST00000515918 PTCD1O75127 700 aaKnown RBP6.77□□□□□ -1.33
RNU6-488P-201ENST00000515918 NPR3P17342 541 aa6.77□□□□□ -1.33
RNU6-488P-201ENST00000515918 SH3BP2P78314 561 aa6.77□□□□□ -1.33
RNU6-488P-201ENST00000515918 COL19A1Q14993 1142 aa6.77□□□□□ -1.33
RNU6-488P-201ENST00000515918 NBPF20Q3BBV1 942 aa6.77□□□□□ -1.33
RNU6-488P-201ENST00000515918 THSD4Q6ZMP0 1018 aa6.77□□□□□ -1.33
RNU6-488P-201ENST00000515918 ZSCAN29Q8IWY8 852 aaPredicted RBP6.77□□□□□ -1.33
RNU6-488P-201ENST00000515918 COL26A1Q96A83 441 aa6.77□□□□□ -1.33
RNU6-488P-201ENST00000515918 TJAP1Q5JTD0 557 aa6.76□□□□□ -1.33
RNU6-488P-201ENST00000515918 CCDC125Q86Z20 511 aa6.76□□□□□ -1.33
RNU6-488P-201ENST00000515918 RGL4Q8IZJ4 473 aa6.76□□□□□ -1.33
RNU6-488P-201ENST00000515918 HELQQ8TDG4 1101 aa6.76□□□□□ -1.33
RNU6-488P-201ENST00000515918 STAU1O95793 577 aaKnown RBP6.75□□□□□ -1.33
RNU6-488P-201ENST00000515918 IGFBP4P22692 258 aa6.75□□□□□ -1.33
RNU6-488P-201ENST00000515918 RAB15P59190 212 aa6.75□□□□□ -1.33
RNU6-488P-201ENST00000515918 C8orf37Q96NL8 207 aa6.75□□□□□ -1.33
RNU6-488P-201ENST00000515918 FCF1Q9Y324 198 aaKnown RBP6.75□□□□□ -1.33
RNU6-488P-201ENST00000515918 ERVH48-1M5A8F1 160 aa6.74□□□□□ -1.33
RNU6-488P-201ENST00000515918 S1PR4O95977 384 aa6.74□□□□□ -1.33
RNU6-488P-201ENST00000515918 P4HBP07237 508 aaKnown RBP6.74□□□□□ -1.33
RNU6-488P-201ENST00000515918 SCNN1DP51172 638 aa6.74□□□□□ -1.33
RNU6-488P-201ENST00000515918 EAPPQ56P03 285 aaPredicted RBP6.74□□□□□ -1.33
RNU6-488P-201ENST00000515918 INTS6LQ5JSJ4 861 aaKnown RBP6.74□□□□□ -1.33
RNU6-488P-201ENST00000515918 LDLRAD1Q5T700 205 aa6.74□□□□□ -1.33
RNU6-488P-201ENST00000515918 TMC7Q7Z402 723 aa6.74□□□□□ -1.33
RNU6-488P-201ENST00000515918 TNS4Q8IZW8 715 aa6.74□□□□□ -1.33
RNU6-488P-201ENST00000515918 NKX2-3Q8TAU0 364 aa6.74□□□□□ -1.33
RNU6-488P-201ENST00000515918 KCTD15Q96SI1 283 aaPredicted RBP6.74□□□□□ -1.33
RNU6-488P-201ENST00000515918 RBCK1Q9BYM8 510 aa6.74□□□□□ -1.33
RNU6-488P-201ENST00000515918 CDV3Q9UKY7 258 aaKnown RBP6.74□□□□□ -1.33
RNU6-488P-201ENST00000515918 FOXO3O43524 673 aa6.73□□□□□ -1.33
RNU6-488P-201ENST00000515918 MYCP01106 439 aaPredicted RBP6.73□□□□□ -1.33
RNU6-488P-201ENST00000515918 EPHA4P54764 986 aa6.73□□□□□ -1.33
RNU6-488P-201ENST00000515918 MRPL58Q14197 206 aaKnown RBP6.73□□□□□ -1.33
RNU6-488P-201ENST00000515918 SCG3Q8WXD2 468 aaKnown RBP6.73□□□□□ -1.33
RNU6-488P-201ENST00000515918 FAM163AQ96GL9 167 aaPredicted RBP6.73□□□□□ -1.33
RNU6-488P-201ENST00000515918 BACH2Q9BYV9 841 aa6.73□□□□□ -1.33
RNU6-488P-201ENST00000515918 SAP130Q9H0E3 1048 aa6.73□□□□□ -1.33
RNU6-488P-201ENST00000515918 POTEMA6NI47 508 aa6.72□□□□□ -1.33
RNU6-488P-201ENST00000515918 FAM13AO94988 1023 aa6.72□□□□□ -1.33
RNU6-488P-201ENST00000515918 MPSTP25325 297 aa6.72□□□□□ -1.33
RNU6-488P-201ENST00000515918 ERVK-9P63128 1117 aa6.72□□□□□ -1.33
RNU6-488P-201ENST00000515918 TSNAXIP1Q2TAA8 658 aa6.72□□□□□ -1.33
RNU6-488P-201ENST00000515918 OSBPL3Q9H4L5 887 aa6.72□□□□□ -1.33
RNU6-488P-201ENST00000515918 IL21Q9HBE4 155 aa6.72□□□□□ -1.33
RNU6-488P-201ENST00000515918 ATAD2Q6PL18 1390 aa6.71□□□□□ -1.33
RNU6-488P-201ENST00000515918 A0A1W2PRU2 124 aa6.71□□□□□ -1.34
RNU6-488P-201ENST00000515918 WASLO00401 505 aaPredicted RBP6.71□□□□□ -1.34
RNU6-488P-201ENST00000515918 GDF10P55107 478 aa6.71□□□□□ -1.34
RNU6-488P-201ENST00000515918 LCE2DQ5TA82 110 aaPredicted RBP6.71□□□□□ -1.34
RNU6-488P-201ENST00000515918 NYAP1Q6ZVC0 841 aa6.71□□□□□ -1.34
RNU6-488P-201ENST00000515918 TSPAN10Q9H1Z9 355 aaPredicted RBP6.71□□□□□ -1.34
RNU6-488P-201ENST00000515918 TREHO43280 583 aa6.7□□□□□ -1.34
RNU6-488P-201ENST00000515918 IGHA2P01877 340 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms