RNA–Protein interactions for RNA: ENST00000515809.1

RBM47-215, Transcript of RNA binding motif protein 47, humanhuman

TSL 2

Gene RBM47, Length 229 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-215ENST00000515809 CCER2I3L3R5 266 aa18.91■□□□□ 0.62
RBM47-215ENST00000515809 VIRMAQ69YN4 1812 aaKnown RBP18.9■□□□□ 0.62
RBM47-215ENST00000515809 HMOX1P09601 288 aa18.9■□□□□ 0.62
RBM47-215ENST00000515809 NEFMP07197 916 aa18.89■□□□□ 0.61
RBM47-215ENST00000515809 AEBP1Q8IUX7 1158 aa18.89■□□□□ 0.61
RBM47-215ENST00000515809 PNNQ9H307 717 aaKnown RBP18.89■□□□□ 0.61
RBM47-215ENST00000515809 ONECUT3O60422 494 aaPredicted RBP18.88■□□□□ 0.61
RBM47-215ENST00000515809 DDB1Q16531 1140 aa18.88■□□□□ 0.61
RBM47-215ENST00000515809 SEPT12Q8IYM1 358 aa18.88■□□□□ 0.61
RBM47-215ENST00000515809 FCHSD2O94868 740 aa18.87■□□□□ 0.61
RBM47-215ENST00000515809 MIER1Q8N108 512 aa18.87■□□□□ 0.61
RBM47-215ENST00000515809 DLG5Q8TDM6 1919 aa18.86■□□□□ 0.61
RBM47-215ENST00000515809 PCDH11XQ9BZA7 1347 aa18.86■□□□□ 0.61
RBM47-215ENST00000515809 PCDH11YQ9BZA8 1340 aa18.86■□□□□ 0.61
RBM47-215ENST00000515809 EXOC5O00471 708 aa18.86■□□□□ 0.61
RBM47-215ENST00000515809 RSPH6AQ9H0K4 717 aa18.86■□□□□ 0.61
RBM47-215ENST00000515809 SPG7Q9UQ90 795 aa18.86■□□□□ 0.61
RBM47-215ENST00000515809 DOT1LQ8TEK3 1739 aa18.86■□□□□ 0.61
RBM47-215ENST00000515809 MAPK8IP3Q9UPT6 1336 aa18.85■□□□□ 0.61
RBM47-215ENST00000515809 PRKAR2BP31323 418 aa18.85■□□□□ 0.61
RBM47-215ENST00000515809 PDE3BQ13370 1112 aa18.85■□□□□ 0.61
RBM47-215ENST00000515809 AMOTQ4VCS5 1084 aa18.85■□□□□ 0.61
RBM47-215ENST00000515809 CCDC184Q52MB2 194 aa18.85■□□□□ 0.61
RBM47-215ENST00000515809 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.85■□□□□ 0.61
RBM47-215ENST00000515809 PLEKHO1Q53GL0 409 aaPredicted RBP18.84■□□□□ 0.61
RBM47-215ENST00000515809 ZCRB1Q8TBF4 217 aaKnown RBP18.84■□□□□ 0.61
RBM47-215ENST00000515809 SBF2Q86WG5 1849 aa18.83■□□□□ 0.6
RBM47-215ENST00000515809 SCN11AQ9UI33 1791 aa18.83■□□□□ 0.6
RBM47-215ENST00000515809 KRT27Q7Z3Y8 459 aa18.81■□□□□ 0.6
RBM47-215ENST00000515809 PNISRQ8TF01 805 aaKnown RBP18.81■□□□□ 0.6
RBM47-215ENST00000515809 NHSQ6T4R5 1651 aa18.8■□□□□ 0.6
RBM47-215ENST00000515809 GAS2L2Q8NHY3 880 aa18.8■□□□□ 0.6
RBM47-215ENST00000515809 ADAMTS8Q9UP79 889 aa18.8■□□□□ 0.6
RBM47-215ENST00000515809 TOGARAM1Q9Y4F4 1720 aa18.8■□□□□ 0.6
RBM47-215ENST00000515809 KAT6BQ8WYB5 2073 aa18.79■□□□□ 0.6
RBM47-215ENST00000515809 C1orf141Q5JVX7 400 aa18.79■□□□□ 0.6
RBM47-215ENST00000515809 ZNF530Q6P9A1 599 aaPredicted RBP18.79■□□□□ 0.6
RBM47-215ENST00000515809 ITGB4P16144 1822 aa18.79■□□□□ 0.6
RBM47-215ENST00000515809 FAM9BQ8IZU0 186 aa18.78■□□□□ 0.6
RBM47-215ENST00000515809 DDX54Q8TDD1 881 aaKnown RBP18.78■□□□□ 0.6
RBM47-215ENST00000515809 RUNDC1Q96C34 613 aa18.78■□□□□ 0.6
RBM47-215ENST00000515809 ADAMTS7Q9UKP4 1686 aa18.78■□□□□ 0.6
RBM47-215ENST00000515809 IFNL2Q8IZJ0 200 aa18.77■□□□□ 0.6
RBM47-215ENST00000515809 MAP3K5Q99683 1374 aa18.77■□□□□ 0.6
RBM47-215ENST00000515809 HSP90AB1P08238 724 aaKnown RBP18.76■□□□□ 0.59
RBM47-215ENST00000515809 PLEKHF1Q96S99 279 aa18.76■□□□□ 0.59
RBM47-215ENST00000515809 BCL9O00512 1426 aa18.75■□□□□ 0.59
RBM47-215ENST00000515809 PHKG2P15735 406 aa18.75■□□□□ 0.59
RBM47-215ENST00000515809 MTHFSDQ2M296 383 aaKnown RBP18.75■□□□□ 0.59
RBM47-215ENST00000515809 CCDC146Q8IYE0 955 aa18.75■□□□□ 0.59
RBM47-215ENST00000515809 AKAP4Q5JQC9 854 aa18.74■□□□□ 0.59
RBM47-215ENST00000515809 MARCH10Q8NA82 808 aaPredicted RBP18.74■□□□□ 0.59
RBM47-215ENST00000515809 PHACTR3Q96KR7 559 aa18.74■□□□□ 0.59
RBM47-215ENST00000515809 TNS1Q9HBL0 1735 aaKnown RBP18.74■□□□□ 0.59
RBM47-215ENST00000515809 BTAF1O14981 1849 aa18.73■□□□□ 0.59
RBM47-215ENST00000515809 CYP27B1O15528 508 aa18.73■□□□□ 0.59
RBM47-215ENST00000515809 FAM196AQ6ZSG2 479 aa18.73■□□□□ 0.59
RBM47-215ENST00000515809 SIPA1L3O60292 1781 aaPredicted RBP18.73■□□□□ 0.59
RBM47-215ENST00000515809 NFE2L2Q16236 605 aa18.72■□□□□ 0.59
RBM47-215ENST00000515809 MRC1P22897 1456 aa18.71■□□□□ 0.59
RBM47-215ENST00000515809 GNAT3A8MTJ3 354 aa18.71■□□□□ 0.59
RBM47-215ENST00000515809 LMOD3Q0VAK6 560 aa18.71■□□□□ 0.59
RBM47-215ENST00000515809 DCAF5Q96JK2 942 aa18.71■□□□□ 0.59
RBM47-215ENST00000515809 KDM6AO15550 1401 aaPredicted RBP18.71■□□□□ 0.59
RBM47-215ENST00000515809 RTF1Q92541 710 aaKnown RBP18.7■□□□□ 0.58
RBM47-215ENST00000515809 RGPD3A6NKT7 1758 aaPredicted RBP18.7■□□□□ 0.58
RBM47-215ENST00000515809 RGPD4Q7Z3J3 1758 aa18.7■□□□□ 0.58
RBM47-215ENST00000515809 NKX1-1Q15270 411 aaPredicted RBP18.69■□□□□ 0.58
RBM47-215ENST00000515809 FAM182BQ5T319 152 aa18.69■□□□□ 0.58
RBM47-215ENST00000515809 TMPOP42166 694 aaKnown RBP18.68■□□□□ 0.58
RBM47-215ENST00000515809 EP400Q96L91 3159 aa18.68■□□□□ 0.58
RBM47-215ENST00000515809 PAPPAQ13219 1627 aa18.67■□□□□ 0.58
RBM47-215ENST00000515809 HTATSF1O43719 755 aaKnown RBP18.67■□□□□ 0.58
RBM47-215ENST00000515809 APAF1O14727 1248 aa18.66■□□□□ 0.58
RBM47-215ENST00000515809 RIPK4P57078 832 aa18.66■□□□□ 0.58
RBM47-215ENST00000515809 NEUROD2Q15784 382 aa18.65■□□□□ 0.58
RBM47-215ENST00000515809 MPRIPQ6WCQ1 1025 aa18.65■□□□□ 0.58
RBM47-215ENST00000515809 SYTL4Q96C24 671 aaPredicted RBP18.65■□□□□ 0.58
RBM47-215ENST00000515809 RRP7AQ9Y3A4 280 aaKnown RBP18.65■□□□□ 0.58
RBM47-215ENST00000515809 ERVV-2B6SEH9 535 aa18.64■□□□□ 0.57
RBM47-215ENST00000515809 RNMTO43148 476 aaKnown RBP18.64■□□□□ 0.57
RBM47-215ENST00000515809 NGEFQ8N5V2 710 aa18.64■□□□□ 0.57
RBM47-215ENST00000515809 ACSBG1Q96GR2 724 aa18.64■□□□□ 0.57
RBM47-215ENST00000515809 CEMIPQ8WUJ3 1361 aa18.64■□□□□ 0.57
RBM47-215ENST00000515809 KDM3BQ7LBC6 1761 aa18.63■□□□□ 0.57
RBM47-215ENST00000515809 TEFQ10587 303 aa18.63■□□□□ 0.57
RBM47-215ENST00000515809 TMOD3Q9NYL9 352 aa18.63■□□□□ 0.57
RBM47-215ENST00000515809 LY75O60449 1722 aa18.63■□□□□ 0.57
RBM47-215ENST00000515809 UBR2Q8IWV8 1755 aa18.63■□□□□ 0.57
RBM47-215ENST00000515809 CABP4P57796 275 aa18.62■□□□□ 0.57
RBM47-215ENST00000515809 ILDR2Q71H61 639 aa18.62■□□□□ 0.57
RBM47-215ENST00000515809 TRIM37O94972 964 aa18.61■□□□□ 0.57
RBM47-215ENST00000515809 SF3B2Q13435 895 aaKnown RBP18.61■□□□□ 0.57
RBM47-215ENST00000515809 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
RBM47-215ENST00000515809 MCM10Q7L590 875 aa18.61■□□□□ 0.57
RBM47-215ENST00000515809 BCL11BQ9C0K0 894 aaPredicted RBP18.61■□□□□ 0.57
RBM47-215ENST00000515809 PRIM1P49642 420 aaKnown RBP18.6■□□□□ 0.57
RBM47-215ENST00000515809 CALD1Q05682 793 aaKnown RBP18.6■□□□□ 0.57
RBM47-215ENST00000515809 SLC52A2Q9HAB3 445 aa18.6■□□□□ 0.57
RBM47-215ENST00000515809 CCDC27Q2M243 656 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms