RNA–Protein interactions for RNA: ENST00000515792.5

RPS3A-213, Transcript of ribosomal protein S3A, humanhuman

TSL 3

Gene RPS3A, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-213ENST00000515792 NBPF20Q3BBV1 942 aa6.85□□□□□ -1.31
RPS3A-213ENST00000515792 NANOS1Q8WY41 292 aaKnown RBP6.85□□□□□ -1.31
RPS3A-213ENST00000515792 GLMNQ92990 594 aa6.85□□□□□ -1.31
RPS3A-213ENST00000515792 KCTD15Q96SI1 283 aaPredicted RBP6.85□□□□□ -1.31
RPS3A-213ENST00000515792 COL25A1Q9BXS0 654 aaPredicted RBP6.85□□□□□ -1.31
RPS3A-213ENST00000515792 ZNF777Q9ULD5 760 aaPredicted RBP6.85□□□□□ -1.31
RPS3A-213ENST00000515792 MCCD1P59942 119 aaPredicted RBP6.84□□□□□ -1.31
RPS3A-213ENST00000515792 SEMA3FQ13275 785 aa6.84□□□□□ -1.31
RPS3A-213ENST00000515792 INTS6LQ5JSJ4 861 aaKnown RBP6.84□□□□□ -1.31
RPS3A-213ENST00000515792 SVOPQ8N4V2 548 aa6.84□□□□□ -1.31
RPS3A-213ENST00000515792 ZNF592Q92610 1267 aa6.84□□□□□ -1.31
RPS3A-213ENST00000515792 CEP126Q9P2H0 1117 aa6.84□□□□□ -1.31
RPS3A-213ENST00000515792 FIGNL2A6NMB9 653 aa6.83□□□□□ -1.32
RPS3A-213ENST00000515792 GIGYF1O75420 1035 aaPredicted RBP6.83□□□□□ -1.32
RPS3A-213ENST00000515792 HDGFL1Q5TGJ6 251 aa6.83□□□□□ -1.32
RPS3A-213ENST00000515792 CCDC155Q8N6L0 562 aa6.83□□□□□ -1.32
RPS3A-213ENST00000515792 PGPEP1Q9NXJ5 209 aa6.83□□□□□ -1.32
RPS3A-213ENST00000515792 ARID3CA6NKF2 412 aa6.82□□□□□ -1.32
RPS3A-213ENST00000515792 RAB15P59190 212 aa6.82□□□□□ -1.32
RPS3A-213ENST00000515792 PPP1R26Q5T8A7 1209 aaPredicted RBP6.82□□□□□ -1.32
RPS3A-213ENST00000515792 ZNF385CQ66K41 422 aaPredicted RBP6.82□□□□□ -1.32
RPS3A-213ENST00000515792 PIK3CDO00329 1044 aa6.81□□□□□ -1.32
RPS3A-213ENST00000515792 SPINT1O43278 529 aa6.81□□□□□ -1.32
RPS3A-213ENST00000515792 RNFT1Q5M7Z0 435 aa6.81□□□□□ -1.32
RPS3A-213ENST00000515792 CALR3Q96L12 384 aaKnown RBP6.81□□□□□ -1.32
RPS3A-213ENST00000515792 UCN2Q96RP3 112 aa6.81□□□□□ -1.32
RPS3A-213ENST00000515792 DNMT3AQ9Y6K1 912 aaPredicted RBP6.81□□□□□ -1.32
RPS3A-213ENST00000515792 SLURP2P0DP57 97 aa6.8□□□□□ -1.32
RPS3A-213ENST00000515792 CBLBQ13191 982 aa6.8□□□□□ -1.32
RPS3A-213ENST00000515792 Q6ZVU0 165 aa6.8□□□□□ -1.32
RPS3A-213ENST00000515792 SEPT12Q8IYM1 358 aa6.8□□□□□ -1.32
RPS3A-213ENST00000515792 PHTF2Q8N3S3 785 aa6.8□□□□□ -1.32
RPS3A-213ENST00000515792 CCDC85AQ96PX6 553 aaPredicted RBP6.8□□□□□ -1.32
RPS3A-213ENST00000515792 C1orf115Q9H7X2 142 aa6.8□□□□□ -1.32
RPS3A-213ENST00000515792 SLC35F4A4IF30 521 aa6.79□□□□□ -1.32
RPS3A-213ENST00000515792 ERVH48-1M5A8F1 160 aa6.79□□□□□ -1.32
RPS3A-213ENST00000515792 IGHA1P01876 353 aa6.79□□□□□ -1.32
RPS3A-213ENST00000515792 ITGA6P23229 1130 aa6.79□□□□□ -1.32
RPS3A-213ENST00000515792 SLFNL1Q499Z3 407 aa6.79□□□□□ -1.32
RPS3A-213ENST00000515792 GPAT2Q6NUI2 795 aa6.79□□□□□ -1.32
RPS3A-213ENST00000515792 SV2AQ7L0J3 742 aa6.79□□□□□ -1.32
RPS3A-213ENST00000515792 RNF135Q8IUD6 432 aa6.79□□□□□ -1.32
RPS3A-213ENST00000515792 CDC14CA4D256 554 aa6.78□□□□□ -1.32
RPS3A-213ENST00000515792 SUPT5HO00267 1087 aaKnown RBP6.78□□□□□ -1.32
RPS3A-213ENST00000515792 ARHGEF15O94989 841 aa6.78□□□□□ -1.32
RPS3A-213ENST00000515792 IRS1P35568 1242 aa6.78□□□□□ -1.32
RPS3A-213ENST00000515792 MARSP56192 900 aaKnown RBP6.78□□□□□ -1.32
RPS3A-213ENST00000515792 DHX9Q08211 1270 aaKnown RBP6.78□□□□□ -1.32
RPS3A-213ENST00000515792 RNF20Q5VTR2 975 aa6.78□□□□□ -1.32
RPS3A-213ENST00000515792 KANK3Q6NY19 840 aa6.78□□□□□ -1.32
RPS3A-213ENST00000515792 VWA5B2Q8N398 1253 aa6.78□□□□□ -1.32
RPS3A-213ENST00000515792 WHAMMQ8TF30 809 aa6.78□□□□□ -1.32
RPS3A-213ENST00000515792 TMPRSS4Q9NRS4 437 aa6.78□□□□□ -1.32
RPS3A-213ENST00000515792 CHIC2Q9UKJ5 165 aa6.78□□□□□ -1.32
RPS3A-213ENST00000515792 FOXK2Q01167 660 aa6.77□□□□□ -1.33
RPS3A-213ENST00000515792 TSGA10IPQ3SY00 556 aa6.77□□□□□ -1.33
RPS3A-213ENST00000515792 PCDHB11Q9Y5F2 797 aa6.77□□□□□ -1.33
RPS3A-213ENST00000515792 TBC1D9Q6ZT07 1266 aa6.76□□□□□ -1.33
RPS3A-213ENST00000515792 PLPP7Q8NBV4 271 aa6.76□□□□□ -1.33
RPS3A-213ENST00000515792 ZNF784Q8NCA9 323 aaPredicted RBP6.76□□□□□ -1.33
RPS3A-213ENST00000515792 NFATC2IPQ8NCF5 419 aa6.76□□□□□ -1.33
RPS3A-213ENST00000515792 SCARF2Q96GP6 870 aaPredicted RBP6.76□□□□□ -1.33
RPS3A-213ENST00000515792 CDCA7Q9BWT1 371 aaPredicted RBP6.76□□□□□ -1.33
RPS3A-213ENST00000515792 DOLKQ9UPQ8 538 aa6.76□□□□□ -1.33
RPS3A-213ENST00000515792 LILRA1O75019 489 aa6.75□□□□□ -1.33
RPS3A-213ENST00000515792 SKIP12755 728 aa6.75□□□□□ -1.33
RPS3A-213ENST00000515792 CTSOP43234 321 aaPredicted RBP6.75□□□□□ -1.33
RPS3A-213ENST00000515792 SCTRP47872 440 aa6.75□□□□□ -1.33
RPS3A-213ENST00000515792 CCDC125Q86Z20 511 aa6.75□□□□□ -1.33
RPS3A-213ENST00000515792 CYLDQ9NQC7 956 aa6.75□□□□□ -1.33
RPS3A-213ENST00000515792 PALM3A6NDB9 673 aaPredicted RBP6.74□□□□□ -1.33
RPS3A-213ENST00000515792 USP17L5A8MUK1 530 aa6.74□□□□□ -1.33
RPS3A-213ENST00000515792 ATP9BO43861 1147 aa6.74□□□□□ -1.33
RPS3A-213ENST00000515792 ADAMTS2O95450 1211 aa6.74□□□□□ -1.33
RPS3A-213ENST00000515792 RELBQ01201 579 aa6.74□□□□□ -1.33
RPS3A-213ENST00000515792 CCDC82Q8N4S0 544 aa6.74□□□□□ -1.33
RPS3A-213ENST00000515792 AGBL1Q96MI9 1066 aa6.74□□□□□ -1.33
RPS3A-213ENST00000515792 INSM2Q96T92 566 aaPredicted RBP6.74□□□□□ -1.33
RPS3A-213ENST00000515792 PPP1R12CQ9BZL4 782 aa6.74□□□□□ -1.33
RPS3A-213ENST00000515792 POLMQ9NP87 494 aaPredicted RBP6.74□□□□□ -1.33
RPS3A-213ENST00000515792 USP17L3A6NCW0 530 aa6.73□□□□□ -1.33
RPS3A-213ENST00000515792 USP17L4A6NCW7 530 aa6.73□□□□□ -1.33
RPS3A-213ENST00000515792 ERVK-9P63128 1117 aa6.73□□□□□ -1.33
RPS3A-213ENST00000515792 MAP3K10Q02779 954 aa6.73□□□□□ -1.33
RPS3A-213ENST00000515792 MAP7D1Q3KQU3 841 aa6.73□□□□□ -1.33
RPS3A-213ENST00000515792 OXLD1Q5BKU9 147 aa6.73□□□□□ -1.33
RPS3A-213ENST00000515792 USP17L2Q6R6M4 530 aa6.73□□□□□ -1.33
RPS3A-213ENST00000515792 USP17L1Q7RTZ2 530 aa6.73□□□□□ -1.33
RPS3A-213ENST00000515792 DEPDC4Q8N2C3 294 aa6.73□□□□□ -1.33
RPS3A-213ENST00000515792 TFIP11Q9UBB9 837 aaKnown RBP6.73□□□□□ -1.33
RPS3A-213ENST00000515792 MAFBQ9Y5Q3 323 aaPredicted RBP6.73□□□□□ -1.33
RPS3A-213ENST00000515792 CFAP70Q5T0N1 1121 aa6.72□□□□□ -1.33
RPS3A-213ENST00000515792 CC2D2BQ6DHV5 1058 aa6.72□□□□□ -1.33
RPS3A-213ENST00000515792 PLEKHM2Q8IWE5 1019 aa6.72□□□□□ -1.33
RPS3A-213ENST00000515792 RNF217Q8TC41 542 aa6.72□□□□□ -1.33
RPS3A-213ENST00000515792 CCDC97Q96F63 343 aaPredicted RBP6.72□□□□□ -1.33
RPS3A-213ENST00000515792 SENP3-EIF4A1A0A087X0R7 540 aa6.71□□□□□ -1.34
RPS3A-213ENST00000515792 ADD1P35611 737 aaKnown RBP6.71□□□□□ -1.34
RPS3A-213ENST00000515792 SRSF11Q05519 484 aaKnown RBP6.71□□□□□ -1.34
RPS3A-213ENST00000515792 NCOA4Q13772 614 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms