RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 CRB1P82279 1406 aa25.9■■□□□ 1.74
TRIO-223ENST00000515710 CAMTA1Q9Y6Y1 1673 aa25.89■■□□□ 1.74
TRIO-223ENST00000515710 COL18A1P39060 1754 aa25.89■■□□□ 1.73
TRIO-223ENST00000515710 FRAT1Q92837 279 aaPredicted RBP25.88■■□□□ 1.73
TRIO-223ENST00000515710 MAP3K5Q99683 1374 aa25.88■■□□□ 1.73
TRIO-223ENST00000515710 AMOTQ4VCS5 1084 aa25.88■■□□□ 1.73
TRIO-223ENST00000515710 SMC4Q9NTJ3 1288 aa25.88■■□□□ 1.73
TRIO-223ENST00000515710 PLEKHO1Q53GL0 409 aaPredicted RBP25.87■■□□□ 1.73
TRIO-223ENST00000515710 SSH1Q8WYL5 1049 aa25.87■■□□□ 1.73
TRIO-223ENST00000515710 RGPD2P0DJD1 1756 aa25.87■■□□□ 1.73
TRIO-223ENST00000515710 VAMP4O75379 141 aa25.86■■□□□ 1.73
TRIO-223ENST00000515710 BCL2L13Q9BXK5 485 aa25.86■■□□□ 1.73
TRIO-223ENST00000515710 KIAA0232Q92628 1395 aa25.86■■□□□ 1.73
TRIO-223ENST00000515710 MS4A1P11836 297 aa25.86■■□□□ 1.73
TRIO-223ENST00000515710 BRPF1P55201 1214 aaPredicted RBP25.84■■□□□ 1.73
TRIO-223ENST00000515710 ZKSCAN2Q63HK3 967 aa25.84■■□□□ 1.73
TRIO-223ENST00000515710 RGPD5Q99666 1765 aa25.84■■□□□ 1.73
TRIO-223ENST00000515710 HAP1P54257 671 aaPredicted RBP25.84■■□□□ 1.73
TRIO-223ENST00000515710 LMO7Q8WWI1 1683 aa25.83■■□□□ 1.73
TRIO-223ENST00000515710 TWISTNBQ3B726 338 aaPredicted RBP25.83■■□□□ 1.73
TRIO-223ENST00000515710 CHRNA2Q15822 529 aa25.82■■□□□ 1.72
TRIO-223ENST00000515710 TSPYL6Q8N831 410 aa25.82■■□□□ 1.72
TRIO-223ENST00000515710 BABAM1Q9NWV8 329 aa25.82■■□□□ 1.72
TRIO-223ENST00000515710 KIF16BQ96L93 1317 aa25.81■■□□□ 1.72
TRIO-223ENST00000515710 AKAP4Q5JQC9 854 aa25.81■■□□□ 1.72
TRIO-223ENST00000515710 C8orf58Q8NAV2 365 aa25.81■■□□□ 1.72
TRIO-223ENST00000515710 IL17REQ8NFR9 667 aa25.81■■□□□ 1.72
TRIO-223ENST00000515710 IPO8O15397 1037 aaKnown RBP25.8■■□□□ 1.72
TRIO-223ENST00000515710 NLRP2Q9NX02 1062 aa25.8■■□□□ 1.72
TRIO-223ENST00000515710 LRRC37A3O60309 1634 aa25.8■■□□□ 1.72
TRIO-223ENST00000515710 FAM208AQ9UK61 1670 aaKnown RBP25.8■■□□□ 1.72
TRIO-223ENST00000515710 CSB-PGBD3P0DP91 1061 aa25.8■■□□□ 1.72
TRIO-223ENST00000515710 PRDM11Q9NQV5 511 aa25.79■■□□□ 1.72
TRIO-223ENST00000515710 PLEKHG2Q9H7P9 1386 aa25.79■■□□□ 1.72
TRIO-223ENST00000515710 AAMPQ13685 434 aa25.78■■□□□ 1.72
TRIO-223ENST00000515710 PANK1Q8TE04 598 aa25.78■■□□□ 1.72
TRIO-223ENST00000515710 TSPYL4Q9UJ04 414 aa25.78■■□□□ 1.72
TRIO-223ENST00000515710 ZNF530Q6P9A1 599 aaPredicted RBP25.78■■□□□ 1.72
TRIO-223ENST00000515710 ROBO1Q9Y6N7 1651 aa25.78■■□□□ 1.72
TRIO-223ENST00000515710 AHDC1Q5TGY3 1603 aaPredicted RBP25.78■■□□□ 1.72
TRIO-223ENST00000515710 RAPGEF4Q8WZA2 1011 aa25.77■■□□□ 1.72
TRIO-223ENST00000515710 NOB1Q9ULX3 412 aaKnown RBP25.77■■□□□ 1.72
TRIO-223ENST00000515710 ELL2O00472 640 aaPredicted RBP25.76■■□□□ 1.72
TRIO-223ENST00000515710 TAF7Q15545 349 aaPredicted RBP25.76■■□□□ 1.72
TRIO-223ENST00000515710 ATF7IPQ6VMQ6 1270 aa25.76■■□□□ 1.72
TRIO-223ENST00000515710 DZIP1LQ8IYY4 767 aaKnown RBP25.76■■□□□ 1.72
TRIO-223ENST00000515710 MRPL50Q8N5N7 158 aaKnown RBP25.76■■□□□ 1.72
TRIO-223ENST00000515710 C1orf141Q5JVX7 400 aa25.76■■□□□ 1.71
TRIO-223ENST00000515710 COG6Q9Y2V7 657 aa25.76■■□□□ 1.71
TRIO-223ENST00000515710 CEMIPQ8WUJ3 1361 aa25.76■■□□□ 1.71
TRIO-223ENST00000515710 ABCA3Q99758 1704 aa25.76■■□□□ 1.71
TRIO-223ENST00000515710 TATP17735 454 aaPredicted RBP25.75■■□□□ 1.71
TRIO-223ENST00000515710 FTSJ3Q8IY81 847 aaKnown RBP25.74■■□□□ 1.71
TRIO-223ENST00000515710 ARHGAP45Q92619 1136 aa25.74■■□□□ 1.71
TRIO-223ENST00000515710 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.74■■□□□ 1.71
TRIO-223ENST00000515710 RLBP1P12271 317 aa25.73■■□□□ 1.71
TRIO-223ENST00000515710 TRIM27P14373 513 aa25.73■■□□□ 1.71
TRIO-223ENST00000515710 MIS18AQ9NYP9 233 aa25.73■■□□□ 1.71
TRIO-223ENST00000515710 TNNQ9UQP3 1299 aa25.73■■□□□ 1.71
TRIO-223ENST00000515710 CLUAP1Q96AJ1 413 aa25.71■■□□□ 1.71
TRIO-223ENST00000515710 WDR17Q8IZU2 1322 aa25.71■■□□□ 1.71
TRIO-223ENST00000515710 OVOS2A0A0G2JMS6 1433 aa25.71■■□□□ 1.71
TRIO-223ENST00000515710 SPG7Q9UQ90 795 aa25.71■■□□□ 1.71
TRIO-223ENST00000515710 SOS1Q07889 1333 aaPredicted RBP25.7■■□□□ 1.71
TRIO-223ENST00000515710 TOM1O60784 492 aa25.7■■□□□ 1.7
TRIO-223ENST00000515710 MVPQ14764 893 aaKnown RBP25.7■■□□□ 1.7
TRIO-223ENST00000515710 LGR6Q9HBX8 967 aa25.7■■□□□ 1.7
TRIO-223ENST00000515710 RNMTO43148 476 aaKnown RBP25.69■■□□□ 1.7
TRIO-223ENST00000515710 KRT24Q2M2I5 525 aa25.68■■□□□ 1.7
TRIO-223ENST00000515710 COL5A2P05997 1499 aaPredicted RBP25.67■■□□□ 1.7
TRIO-223ENST00000515710 TEFQ10587 303 aa25.67■■□□□ 1.7
TRIO-223ENST00000515710 MPRIPQ6WCQ1 1025 aa25.67■■□□□ 1.7
TRIO-223ENST00000515710 TOM1L2Q6ZVM7 507 aa25.65■■□□□ 1.7
TRIO-223ENST00000515710 COL22A1Q8NFW1 1626 aaPredicted RBP25.65■■□□□ 1.7
TRIO-223ENST00000515710 MEGF6O75095 1541 aa25.65■■□□□ 1.7
TRIO-223ENST00000515710 CENPQQ7L2Z9 268 aaPredicted RBP25.65■■□□□ 1.7
TRIO-223ENST00000515710 DDX19BQ9UMR2 479 aa25.65■■□□□ 1.7
TRIO-223ENST00000515710 API5Q9BZZ5 524 aaKnown RBP25.64■■□□□ 1.69
TRIO-223ENST00000515710 EVA1CP58658 441 aa25.63■■□□□ 1.69
TRIO-223ENST00000515710 CARD10Q9BWT7 1032 aa25.63■■□□□ 1.69
TRIO-223ENST00000515710 KDM2BQ8NHM5 1336 aa25.63■■□□□ 1.69
TRIO-223ENST00000515710 TCERG1O14776 1098 aaKnown RBP25.63■■□□□ 1.69
TRIO-223ENST00000515710 IFNL2Q8IZJ0 200 aa25.63■■□□□ 1.69
TRIO-223ENST00000515710 PHKG2P15735 406 aa25.62■■□□□ 1.69
TRIO-223ENST00000515710 TMEM57Q8N5G2 664 aa25.61■■□□□ 1.69
TRIO-223ENST00000515710 ADAMTS7Q9UKP4 1686 aa25.61■■□□□ 1.69
TRIO-223ENST00000515710 ITPRIPQ8IWB1 547 aa25.61■■□□□ 1.69
TRIO-223ENST00000515710 BTBD11A6QL63 1104 aa25.6■■□□□ 1.69
TRIO-223ENST00000515710 CHMP4AQ9BY43 222 aa25.59■■□□□ 1.69
TRIO-223ENST00000515710 HSP90AB1P08238 724 aaKnown RBP25.59■■□□□ 1.69
TRIO-223ENST00000515710 CCDC30Q5VVM6 783 aa25.59■■□□□ 1.69
TRIO-223ENST00000515710 CHMP4BQ9H444 224 aaKnown RBP25.59■■□□□ 1.69
TRIO-223ENST00000515710 PHLPP1O60346 1717 aa25.58■■□□□ 1.69
TRIO-223ENST00000515710 PKD1L3Q7Z443 1732 aa25.58■■□□□ 1.69
TRIO-223ENST00000515710 PTPRCP08575 1304 aa25.58■■□□□ 1.69
TRIO-223ENST00000515710 EIF4A1P60842 406 aaKnown RBP25.58■■□□□ 1.69
TRIO-223ENST00000515710 STRN4Q9NRL3 753 aa25.58■■□□□ 1.69
TRIO-223ENST00000515710 ABCC4O15439 1325 aa25.58■■□□□ 1.68
TRIO-223ENST00000515710 COL16A1Q07092 1604 aaPredicted RBP25.57■■□□□ 1.68
TRIO-223ENST00000515710 COL14A1Q05707 1796 aaKnown RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms