RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 ERVK-9P63128 1117 aa9.4□□□□□ -0.9
LINC01088-211ENST00000515597 BANK1Q8NDB2 785 aa9.4□□□□□ -0.9
LINC01088-211ENST00000515597 NDUFB9Q9Y6M9 179 aa9.4□□□□□ -0.9
LINC01088-211ENST00000515597 RNF144AP50876 292 aaPredicted RBP9.39□□□□□ -0.91
LINC01088-211ENST00000515597 CC2D2BQ6DHV5 1058 aa9.39□□□□□ -0.91
LINC01088-211ENST00000515597 WHAMMQ8TF30 809 aa9.39□□□□□ -0.91
LINC01088-211ENST00000515597 PCDHB11Q9Y5F2 797 aa9.39□□□□□ -0.91
LINC01088-211ENST00000515597 A0A1W2PRU2 124 aa9.38□□□□□ -0.91
LINC01088-211ENST00000515597 RNF20Q5VTR2 975 aa9.37□□□□□ -0.91
LINC01088-211ENST00000515597 ZNF385CQ66K41 422 aaPredicted RBP9.37□□□□□ -0.91
LINC01088-211ENST00000515597 SVOPQ8N4V2 548 aa9.36□□□□□ -0.91
LINC01088-211ENST00000515597 TRIM52Q96A61 297 aa9.36□□□□□ -0.91
LINC01088-211ENST00000515597 SOCS7O14512 581 aa9.35□□□□□ -0.91
LINC01088-211ENST00000515597 CYP2U1Q7Z449 544 aa9.35□□□□□ -0.91
LINC01088-211ENST00000515597 ARHGEF10LQ9HCE6 1279 aa9.35□□□□□ -0.91
LINC01088-211ENST00000515597 ADAMTS8Q9UP79 889 aa9.35□□□□□ -0.91
LINC01088-211ENST00000515597 ZNF330Q9Y3S2 320 aaPredicted RBP9.35□□□□□ -0.91
LINC01088-211ENST00000515597 SLURP2P0DP57 97 aa9.34□□□□□ -0.91
LINC01088-211ENST00000515597 GAS6Q14393 721 aa9.34□□□□□ -0.91
LINC01088-211ENST00000515597 ZNF837Q96EG3 531 aaPredicted RBP9.34□□□□□ -0.91
LINC01088-211ENST00000515597 OSBPL3Q9H4L5 887 aa9.34□□□□□ -0.91
LINC01088-211ENST00000515597 GPC1P35052 558 aa9.33□□□□□ -0.92
LINC01088-211ENST00000515597 GSK3AP49840 483 aa9.33□□□□□ -0.92
LINC01088-211ENST00000515597 MCCD1P59942 119 aaPredicted RBP9.33□□□□□ -0.92
LINC01088-211ENST00000515597 POU4F2Q12837 409 aa9.33□□□□□ -0.92
LINC01088-211ENST00000515597 SLC27A3Q5K4L6 730 aa9.33□□□□□ -0.92
LINC01088-211ENST00000515597 RIPOR1Q6ZS17 1223 aa9.33□□□□□ -0.92
LINC01088-211ENST00000515597 CCDC125Q86Z20 511 aa9.33□□□□□ -0.92
LINC01088-211ENST00000515597 NLRP3Q96P20 1036 aa9.33□□□□□ -0.92
LINC01088-211ENST00000515597 RAB6BQ9NRW1 208 aa9.33□□□□□ -0.92
LINC01088-211ENST00000515597 TBC1D2BQ9UPU7 963 aa9.33□□□□□ -0.92
LINC01088-211ENST00000515597 GPR25O00155 361 aa9.32□□□□□ -0.92
LINC01088-211ENST00000515597 APBB1O00213 710 aa9.32□□□□□ -0.92
LINC01088-211ENST00000515597 TRAK2O60296 914 aa9.32□□□□□ -0.92
LINC01088-211ENST00000515597 ADAMTS2O95450 1211 aa9.32□□□□□ -0.92
LINC01088-211ENST00000515597 KCNMA1Q12791 1236 aa9.32□□□□□ -0.92
LINC01088-211ENST00000515597 CLN3Q13286 438 aa9.32□□□□□ -0.92
LINC01088-211ENST00000515597 ZNF592Q92610 1267 aa9.32□□□□□ -0.92
LINC01088-211ENST00000515597 CCDC85AQ96PX6 553 aaPredicted RBP9.31□□□□□ -0.92
LINC01088-211ENST00000515597 GAS2L1Q99501 681 aaPredicted RBP9.31□□□□□ -0.92
LINC01088-211ENST00000515597 CDCA7Q9BWT1 371 aaPredicted RBP9.31□□□□□ -0.92
LINC01088-211ENST00000515597 TRIM22Q8IYM9 498 aa9.3□□□□□ -0.92
LINC01088-211ENST00000515597 ESF1Q9H501 851 aaKnown RBP9.3□□□□□ -0.92
LINC01088-211ENST00000515597 DBN1Q16643 649 aa9.29□□□□□ -0.92
LINC01088-211ENST00000515597 NBPF10Q6P3W6 841 aaKnown RBP9.29□□□□□ -0.92
LINC01088-211ENST00000515597 NBPF15Q8N660 670 aa9.29□□□□□ -0.92
LINC01088-211ENST00000515597 GRIP2Q9C0E4 1043 aa9.29□□□□□ -0.92
LINC01088-211ENST00000515597 DYRK1BQ9Y463 629 aa9.29□□□□□ -0.92
LINC01088-211ENST00000515597 ARHGEF15O94989 841 aa9.28□□□□□ -0.92
LINC01088-211ENST00000515597 LYPD4Q6UWN0 246 aa9.28□□□□□ -0.92
LINC01088-211ENST00000515597 KCTD17Q8N5Z5 321 aa9.28□□□□□ -0.92
LINC01088-211ENST00000515597 CEP126Q9P2H0 1117 aa9.28□□□□□ -0.92
LINC01088-211ENST00000515597 IL2RAP01589 272 aa9.27□□□□□ -0.93
LINC01088-211ENST00000515597 RASSF7Q02833 373 aa9.27□□□□□ -0.93
LINC01088-211ENST00000515597 SRSF11Q05519 484 aaKnown RBP9.27□□□□□ -0.93
LINC01088-211ENST00000515597 GTPBP3Q969Y2 492 aaKnown RBP9.27□□□□□ -0.93
LINC01088-211ENST00000515597 RNF225M0QZC1 329 aaPredicted RBP9.26□□□□□ -0.93
LINC01088-211ENST00000515597 MYCP01106 439 aaPredicted RBP9.26□□□□□ -0.93
LINC01088-211ENST00000515597 IRF5Q13568 498 aa9.26□□□□□ -0.93
LINC01088-211ENST00000515597 TMEM151AQ8N4L1 468 aa9.26□□□□□ -0.93
LINC01088-211ENST00000515597 SPATA31C2B4DYI2 1134 aa9.25□□□□□ -0.93
LINC01088-211ENST00000515597 WASLO00401 505 aaPredicted RBP9.25□□□□□ -0.93
LINC01088-211ENST00000515597 GDF11O95390 407 aa9.25□□□□□ -0.93
LINC01088-211ENST00000515597 TAS1R3Q7RTX0 852 aa9.25□□□□□ -0.93
LINC01088-211ENST00000515597 CNKSR1Q969H4 720 aa9.25□□□□□ -0.93
LINC01088-211ENST00000515597 TIMMDC1Q9NPL8 285 aa9.25□□□□□ -0.93
LINC01088-211ENST00000515597 STAU1O95793 577 aaKnown RBP9.24□□□□□ -0.93
LINC01088-211ENST00000515597 GNRH1P01148 92 aa9.24□□□□□ -0.93
LINC01088-211ENST00000515597 CELA2BP08218 269 aaPredicted RBP9.24□□□□□ -0.93
LINC01088-211ENST00000515597 TSGA10IPQ3SY00 556 aa9.24□□□□□ -0.93
LINC01088-211ENST00000515597 FOXR1Q6PIV2 292 aa9.24□□□□□ -0.93
LINC01088-211ENST00000515597 GMCL1Q96IK5 515 aa9.24□□□□□ -0.93
LINC01088-211ENST00000515597 ESYT1Q9BSJ8 1104 aa9.24□□□□□ -0.93
LINC01088-211ENST00000515597 MBIPQ9NS73 344 aa9.24□□□□□ -0.93
LINC01088-211ENST00000515597 IGF1RP08069 1367 aa9.24□□□□□ -0.93
LINC01088-211ENST00000515597 IRS1P35568 1242 aa9.23□□□□□ -0.93
LINC01088-211ENST00000515597 PHKA2P46019 1235 aa9.23□□□□□ -0.93
LINC01088-211ENST00000515597 MAP3K10Q02779 954 aa9.23□□□□□ -0.93
LINC01088-211ENST00000515597 CENPCQ03188 943 aa9.23□□□□□ -0.93
LINC01088-211ENST00000515597 GPAMQ9HCL2 828 aa9.23□□□□□ -0.93
LINC01088-211ENST00000515597 H7C1W4 665 aa9.22□□□□□ -0.93
LINC01088-211ENST00000515597 PRKCSHP14314 528 aaPredicted RBP9.22□□□□□ -0.93
LINC01088-211ENST00000515597 MARSP56192 900 aaKnown RBP9.22□□□□□ -0.93
LINC01088-211ENST00000515597 EIF4G2P78344 907 aaKnown RBP eCLIP9.22□□□□□ -0.931e-7■■■■□ 19.4
LINC01088-211ENST00000515597 VAC14Q08AM6 782 aa9.22□□□□□ -0.93
LINC01088-211ENST00000515597 NUCKS1Q9H1E3 243 aaKnown RBP9.22□□□□□ -0.93
LINC01088-211ENST00000515597 DOLKQ9UPQ8 538 aa9.22□□□□□ -0.93
LINC01088-211ENST00000515597 WDR44Q5JSH3 913 aa9.21□□□□□ -0.94
LINC01088-211ENST00000515597 ZSCAN10Q96SZ4 725 aaPredicted RBP9.21□□□□□ -0.94
LINC01088-211ENST00000515597 GDPD2Q9HCC8 539 aa9.21□□□□□ -0.94
LINC01088-211ENST00000515597 PRM3Q9NNZ6 103 aa9.21□□□□□ -0.94
LINC01088-211ENST00000515597 HRH3Q9Y5N1 445 aa9.21□□□□□ -0.94
LINC01088-211ENST00000515597 F11P03951 625 aa9.2□□□□□ -0.94
LINC01088-211ENST00000515597 THBS1P07996 1170 aa9.2□□□□□ -0.94
LINC01088-211ENST00000515597 ABL2P42684 1182 aa9.2□□□□□ -0.94
LINC01088-211ENST00000515597 SLFNL1Q499Z3 407 aa9.2□□□□□ -0.94
LINC01088-211ENST00000515597 OXLD1Q5BKU9 147 aa9.2□□□□□ -0.94
LINC01088-211ENST00000515597 RNF135Q8IUD6 432 aa9.2□□□□□ -0.94
LINC01088-211ENST00000515597 PHTF2Q8N3S3 785 aa9.2□□□□□ -0.94
LINC01088-211ENST00000515597 TRERF1Q96PN7 1200 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms