RNA–Protein interactions for RNA: ENST00000515509.1

CXXC4-203, Transcript of CXXC finger protein 4, humanhuman

TSL 2

Gene CXXC4, Length 363 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-203ENST00000515509 CUEDC1Q9NWM3 386 aaPredicted RBP7.72□□□□□ -1.17
CXXC4-203ENST00000515509 SRSF11Q05519 484 aaKnown RBP7.71□□□□□ -1.18
CXXC4-203ENST00000515509 LYPD4Q6UWN0 246 aa7.71□□□□□ -1.18
CXXC4-203ENST00000515509 PRICKLE2Q7Z3G6 844 aa7.71□□□□□ -1.18
CXXC4-203ENST00000515509 TRIM52Q96A61 297 aa7.71□□□□□ -1.18
CXXC4-203ENST00000515509 DNMT3AQ9Y6K1 912 aaPredicted RBP7.71□□□□□ -1.18
CXXC4-203ENST00000515509 RHOQP17081 205 aa7.7□□□□□ -1.18
CXXC4-203ENST00000515509 RNF144AP50876 292 aaPredicted RBP7.7□□□□□ -1.18
CXXC4-203ENST00000515509 MAP3K10Q02779 954 aa7.7□□□□□ -1.18
CXXC4-203ENST00000515509 GAS6Q14393 721 aa7.7□□□□□ -1.18
CXXC4-203ENST00000515509 KANK3Q6NY19 840 aa7.7□□□□□ -1.18
CXXC4-203ENST00000515509 SCARF2Q96GP6 870 aaPredicted RBP7.7□□□□□ -1.18
CXXC4-203ENST00000515509 PCMTD1Q96MG8 357 aaPredicted RBP7.7□□□□□ -1.18
CXXC4-203ENST00000515509 ATP5J2-PTCD1G3V325 749 aa7.69□□□□□ -1.18
CXXC4-203ENST00000515509 IL27Q8NEV9 243 aa7.69□□□□□ -1.18
CXXC4-203ENST00000515509 GPAT2Q6NUI2 795 aa7.68□□□□□ -1.18
CXXC4-203ENST00000515509 TRIM34Q9BYJ4 488 aa7.68□□□□□ -1.18
CXXC4-203ENST00000515509 ZBBXA8MT70 800 aa7.67□□□□□ -1.18
CXXC4-203ENST00000515509 GIGYF1O75420 1035 aaPredicted RBP7.67□□□□□ -1.18
CXXC4-203ENST00000515509 CELA2BP08218 269 aaPredicted RBP7.67□□□□□ -1.18
CXXC4-203ENST00000515509 PRKCSHP14314 528 aaPredicted RBP7.67□□□□□ -1.18
CXXC4-203ENST00000515509 ZNF837Q96EG3 531 aaPredicted RBP7.67□□□□□ -1.18
CXXC4-203ENST00000515509 GMCL1Q96IK5 515 aa7.67□□□□□ -1.18
CXXC4-203ENST00000515509 PCDHB9Q9Y5E1 797 aa7.67□□□□□ -1.18
CXXC4-203ENST00000515509 MEN1O00255 615 aa7.66□□□□□ -1.18
CXXC4-203ENST00000515509 IGHA1P01876 353 aa7.66□□□□□ -1.18
CXXC4-203ENST00000515509 GPC1P35052 558 aa7.66□□□□□ -1.18
CXXC4-203ENST00000515509 TRIM22Q8IYM9 498 aa7.66□□□□□ -1.18
CXXC4-203ENST00000515509 MBIPQ9NS73 344 aa7.66□□□□□ -1.18
CXXC4-203ENST00000515509 GPR25O00155 361 aa7.65□□□□□ -1.18
CXXC4-203ENST00000515509 FOXK2Q01167 660 aa7.65□□□□□ -1.18
CXXC4-203ENST00000515509 FOXR1Q6PIV2 292 aa7.65□□□□□ -1.18
CXXC4-203ENST00000515509 RIPOR1Q6ZS17 1223 aa7.65□□□□□ -1.18
CXXC4-203ENST00000515509 ENAMQ9NRM1 1142 aa7.65□□□□□ -1.18
CXXC4-203ENST00000515509 A0A1W2PRU2 124 aa7.64□□□□□ -1.19
CXXC4-203ENST00000515509 FBXO45P0C2W1 286 aa7.64□□□□□ -1.19
CXXC4-203ENST00000515509 TMEM259Q4ZIN3 620 aa7.64□□□□□ -1.19
CXXC4-203ENST00000515509 CC2D2BQ6DHV5 1058 aa7.64□□□□□ -1.19
CXXC4-203ENST00000515509 DYRK1BQ9Y463 629 aa7.64□□□□□ -1.19
CXXC4-203ENST00000515509 IGF1RP08069 1367 aa7.63□□□□□ -1.19
CXXC4-203ENST00000515509 ERVK-9P63128 1117 aa7.63□□□□□ -1.19
CXXC4-203ENST00000515509 DBN1Q16643 649 aa7.63□□□□□ -1.19
CXXC4-203ENST00000515509 CCDC125Q86Z20 511 aa7.63□□□□□ -1.19
CXXC4-203ENST00000515509 H7C1W4 665 aa7.62□□□□□ -1.19
CXXC4-203ENST00000515509 POU4F2Q12837 409 aa7.62□□□□□ -1.19
CXXC4-203ENST00000515509 SLC27A3Q5K4L6 730 aa7.62□□□□□ -1.19
CXXC4-203ENST00000515509 RNF20Q5VTR2 975 aa7.62□□□□□ -1.19
CXXC4-203ENST00000515509 NLRP3Q96P20 1036 aa7.62□□□□□ -1.19
CXXC4-203ENST00000515509 GAS2L1Q99501 681 aaPredicted RBP7.62□□□□□ -1.19
CXXC4-203ENST00000515509 GTPBP3Q969Y2 492 aaKnown RBP7.61□□□□□ -1.19
CXXC4-203ENST00000515509 GJD4Q96KN9 370 aaPredicted RBP7.61□□□□□ -1.19
CXXC4-203ENST00000515509 PHF20L1A8MW92 1017 aa7.6□□□□□ -1.19
CXXC4-203ENST00000515509 BCRP11274 1271 aa7.6□□□□□ -1.19
CXXC4-203ENST00000515509 CYP2U1Q7Z449 544 aa7.6□□□□□ -1.19
CXXC4-203ENST00000515509 NEDD1Q8NHV4 660 aa7.6□□□□□ -1.19
CXXC4-203ENST00000515509 TRERF1Q96PN7 1200 aa7.6□□□□□ -1.19
CXXC4-203ENST00000515509 GRIP2Q9C0E4 1043 aa7.6□□□□□ -1.19
CXXC4-203ENST00000515509 CNTNAP5Q8WYK1 1306 aa7.59□□□□□ -1.19
CXXC4-203ENST00000515509 CLN3Q13286 438 aa7.59□□□□□ -1.19
CXXC4-203ENST00000515509 NBPF10Q6P3W6 841 aaKnown RBP7.59□□□□□ -1.19
CXXC4-203ENST00000515509 PODNQ7Z5L7 613 aa7.59□□□□□ -1.19
CXXC4-203ENST00000515509 NBPF15Q8N660 670 aa7.59□□□□□ -1.19
CXXC4-203ENST00000515509 PCDHB11Q9Y5F2 797 aa7.59□□□□□ -1.19
CXXC4-203ENST00000515509 SCTRP47872 440 aa7.58□□□□□ -1.2
CXXC4-203ENST00000515509 MCCD1P59942 119 aaPredicted RBP7.58□□□□□ -1.2
CXXC4-203ENST00000515509 NR1H3Q13133 447 aa7.58□□□□□ -1.2
CXXC4-203ENST00000515509 ZNF592Q92610 1267 aa7.58□□□□□ -1.2
CXXC4-203ENST00000515509 ACDQ96AP0 544 aa7.58□□□□□ -1.2
CXXC4-203ENST00000515509 SPATA31C2B4DYI2 1134 aa7.57□□□□□ -1.2
CXXC4-203ENST00000515509 MX2P20592 715 aa7.57□□□□□ -1.2
CXXC4-203ENST00000515509 BEND7Q8N7W2 519 aaPredicted RBP7.57□□□□□ -1.2
CXXC4-203ENST00000515509 OSBPL3Q9H4L5 887 aa7.57□□□□□ -1.2
CXXC4-203ENST00000515509 ARHGEF10LQ9HCE6 1279 aa7.57□□□□□ -1.2
CXXC4-203ENST00000515509 TIMMDC1Q9NPL8 285 aa7.57□□□□□ -1.2
CXXC4-203ENST00000515509 NSFL1CQ9UNZ2 370 aaKnown RBP7.57□□□□□ -1.2
CXXC4-203ENST00000515509 WASLO00401 505 aaPredicted RBP7.56□□□□□ -1.2
CXXC4-203ENST00000515509 TRAK2O60296 914 aa7.56□□□□□ -1.2
CXXC4-203ENST00000515509 PLA2G4EQ3MJ16 856 aa7.56□□□□□ -1.2
CXXC4-203ENST00000515509 WDR44Q5JSH3 913 aa7.56□□□□□ -1.2
CXXC4-203ENST00000515509 TAS1R3Q7RTX0 852 aa7.56□□□□□ -1.2
CXXC4-203ENST00000515509 DCAF5Q96JK2 942 aa7.56□□□□□ -1.2
CXXC4-203ENST00000515509 NUCKS1Q9H1E3 243 aaKnown RBP7.56□□□□□ -1.2
CXXC4-203ENST00000515509 ESF1Q9H501 851 aaKnown RBP7.56□□□□□ -1.2
CXXC4-203ENST00000515509 ZNF330Q9Y3S2 320 aaPredicted RBP7.56□□□□□ -1.2
CXXC4-203ENST00000515509 MSTNO14793 375 aa7.55□□□□□ -1.2
CXXC4-203ENST00000515509 F11P03951 625 aa7.55□□□□□ -1.2
CXXC4-203ENST00000515509 APBB1O00213 710 aa7.54□□□□□ -1.2
CXXC4-203ENST00000515509 BANK1Q8NDB2 785 aa7.54□□□□□ -1.2
CXXC4-203ENST00000515509 RAB6BQ9NRW1 208 aa7.54□□□□□ -1.2
CXXC4-203ENST00000515509 LRRC4BQ9NT99 713 aa7.54□□□□□ -1.2
CXXC4-203ENST00000515509 OIP5O43482 229 aa7.52□□□□□ -1.21
CXXC4-203ENST00000515509 GNRH1P01148 92 aa7.52□□□□□ -1.21
CXXC4-203ENST00000515509 MAP2K3P46734 347 aa7.52□□□□□ -1.21
CXXC4-203ENST00000515509 CNKSR1Q969H4 720 aa7.52□□□□□ -1.21
CXXC4-203ENST00000515509 SPOCK3Q9BQ16 436 aa7.52□□□□□ -1.21
CXXC4-203ENST00000515509 CFHR5Q9BXR6 569 aa7.52□□□□□ -1.21
CXXC4-203ENST00000515509 OXCT2Q9BYC2 517 aaPredicted RBP7.52□□□□□ -1.21
CXXC4-203ENST00000515509 GPAMQ9HCL2 828 aa7.52□□□□□ -1.21
CXXC4-203ENST00000515509 NDUFB9Q9Y6M9 179 aa7.52□□□□□ -1.21
CXXC4-203ENST00000515509 IL2RAP01589 272 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms