RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-215ENST00000515479 LORP23490 312 aaPredicted RBP10.18□□□□□ -0.78
RUFY3-215ENST00000515479 LYSMD3Q7Z3D4 306 aa10.18□□□□□ -0.78
RUFY3-215ENST00000515479 CYP2U1Q7Z449 544 aa10.18□□□□□ -0.78
RUFY3-215ENST00000515479 ITGA6P23229 1130 aa10.17□□□□□ -0.78
RUFY3-215ENST00000515479 SENP3-EIF4A1A0A087X0R7 540 aa10.16□□□□□ -0.78
RUFY3-215ENST00000515479 A0A1W2PRU2 124 aa10.16□□□□□ -0.78
RUFY3-215ENST00000515479 CDC14CA4D256 554 aa10.16□□□□□ -0.78
RUFY3-215ENST00000515479 RNF144AP50876 292 aaPredicted RBP10.16□□□□□ -0.78
RUFY3-215ENST00000515479 EIF4G2P78344 907 aaKnown RBP eCLIP10.16□□□□□ -0.78
RUFY3-215ENST00000515479 IRF5Q13568 498 aa10.16□□□□□ -0.78
RUFY3-215ENST00000515479 PRICKLE2Q7Z3G6 844 aa10.16□□□□□ -0.78
RUFY3-215ENST00000515479 GPR161Q8N6U8 529 aaKnown RBP10.16□□□□□ -0.78
RUFY3-215ENST00000515479 GDPD2Q9HCC8 539 aa10.16□□□□□ -0.78
RUFY3-215ENST00000515479 CEP126Q9P2H0 1117 aa10.16□□□□□ -0.78
RUFY3-215ENST00000515479 ABL2P42684 1182 aa10.15□□□□□ -0.78
RUFY3-215ENST00000515479 NANOS1Q8WY41 292 aaKnown RBP10.15□□□□□ -0.78
RUFY3-215ENST00000515479 NLRP3Q96P20 1036 aa10.15□□□□□ -0.78
RUFY3-215ENST00000515479 RHOQP17081 205 aa10.14□□□□□ -0.79
RUFY3-215ENST00000515479 GPC1P35052 558 aa10.14□□□□□ -0.79
RUFY3-215ENST00000515479 VWA5B2Q8N398 1253 aa10.14□□□□□ -0.79
RUFY3-215ENST00000515479 CCDC85AQ96PX6 553 aaPredicted RBP10.14□□□□□ -0.79
RUFY3-215ENST00000515479 OSBPL3Q9H4L5 887 aa10.14□□□□□ -0.79
RUFY3-215ENST00000515479 VAC14Q08AM6 782 aa10.13□□□□□ -0.79
RUFY3-215ENST00000515479 MCM6Q14566 821 aa10.13□□□□□ -0.79
RUFY3-215ENST00000515479 ARHGEF10LQ9HCE6 1279 aa10.13□□□□□ -0.79
RUFY3-215ENST00000515479 TRAK2O60296 914 aa10.12□□□□□ -0.79
RUFY3-215ENST00000515479 MYCP01106 439 aaPredicted RBP10.12□□□□□ -0.79
RUFY3-215ENST00000515479 KRT76Q01546 638 aa10.12□□□□□ -0.79
RUFY3-215ENST00000515479 SLC27A3Q5K4L6 730 aa10.12□□□□□ -0.79
RUFY3-215ENST00000515479 SV2AQ7L0J3 742 aa10.12□□□□□ -0.79
RUFY3-215ENST00000515479 CNTNAP3BQ96NU0 1288 aa10.12□□□□□ -0.79
RUFY3-215ENST00000515479 CDCA7Q9BWT1 371 aaPredicted RBP10.12□□□□□ -0.79
RUFY3-215ENST00000515479 COL25A1Q9BXS0 654 aaPredicted RBP10.12□□□□□ -0.79
RUFY3-215ENST00000515479 CNTNAP3Q9BZ76 1288 aa10.12□□□□□ -0.79
RUFY3-215ENST00000515479 CLN3Q13286 438 aa10.11□□□□□ -0.79
RUFY3-215ENST00000515479 RAB6BQ9NRW1 208 aa10.11□□□□□ -0.79
RUFY3-215ENST00000515479 SLFNL1Q499Z3 407 aa10.1□□□□□ -0.79
RUFY3-215ENST00000515479 DOLKQ9UPQ8 538 aa10.1□□□□□ -0.79
RUFY3-215ENST00000515479 RNF135Q8IUD6 432 aa10.09□□□□□ -0.79
RUFY3-215ENST00000515479 GNRH1P01148 92 aa10.08□□□□□ -0.8
RUFY3-215ENST00000515479 POU4F2Q12837 409 aa10.08□□□□□ -0.8
RUFY3-215ENST00000515479 WASHC4Q2M389 1173 aa10.08□□□□□ -0.8
RUFY3-215ENST00000515479 RNFT1Q5M7Z0 435 aa10.08□□□□□ -0.8
RUFY3-215ENST00000515479 CUEDC1Q9NWM3 386 aaPredicted RBP10.08□□□□□ -0.8
RUFY3-215ENST00000515479 RIPOR1Q6ZS17 1223 aa10.06□□□□□ -0.8
RUFY3-215ENST00000515479 PHTF2Q8N3S3 785 aa10.06□□□□□ -0.8
RUFY3-215ENST00000515479 CNKSR1Q969H4 720 aa10.06□□□□□ -0.8
RUFY3-215ENST00000515479 GRIP2Q9C0E4 1043 aa10.06□□□□□ -0.8
RUFY3-215ENST00000515479 IL2RAP01589 272 aa10.05□□□□□ -0.8
RUFY3-215ENST00000515479 TSGA10IPQ3SY00 556 aa10.05□□□□□ -0.8
RUFY3-215ENST00000515479 OXLD1Q5BKU9 147 aa10.05□□□□□ -0.8
RUFY3-215ENST00000515479 NBPF10Q6P3W6 841 aaKnown RBP10.05□□□□□ -0.8
RUFY3-215ENST00000515479 NBPF15Q8N660 670 aa10.05□□□□□ -0.8
RUFY3-215ENST00000515479 ESYT1Q9BSJ8 1104 aa10.05□□□□□ -0.8
RUFY3-215ENST00000515479 USP4Q13107 963 aa10.04□□□□□ -0.8
RUFY3-215ENST00000515479 SEMA3FQ13275 785 aa10.04□□□□□ -0.8
RUFY3-215ENST00000515479 GAS2L1Q99501 681 aaPredicted RBP10.04□□□□□ -0.8
RUFY3-215ENST00000515479 COG6Q9Y2V7 657 aa10.04□□□□□ -0.8
RUFY3-215ENST00000515479 DYRK1BQ9Y463 629 aa10.04□□□□□ -0.8
RUFY3-215ENST00000515479 SPATA31C2B4DYI2 1134 aa10.03□□□□□ -0.8
RUFY3-215ENST00000515479 WASLO00401 505 aaPredicted RBP10.03□□□□□ -0.8
RUFY3-215ENST00000515479 TAS1R3Q7RTX0 852 aa10.03□□□□□ -0.8
RUFY3-215ENST00000515479 ZNF837Q96EG3 531 aaPredicted RBP10.03□□□□□ -0.8
RUFY3-215ENST00000515479 CENPCQ03188 943 aa10.02□□□□□ -0.81
RUFY3-215ENST00000515479 TRIM22Q8IYM9 498 aa10.02□□□□□ -0.81
RUFY3-215ENST00000515479 TIMMDC1Q9NPL8 285 aa10.02□□□□□ -0.81
RUFY3-215ENST00000515479 SOX11P35716 441 aa10.01□□□□□ -0.81
RUFY3-215ENST00000515479 ESCO1Q5FWF5 840 aa10.01□□□□□ -0.81
RUFY3-215ENST00000515479 SIRT1Q96EB6 747 aa10.01□□□□□ -0.81
RUFY3-215ENST00000515479 ZSCAN10Q96SZ4 725 aaPredicted RBP10.01□□□□□ -0.81
RUFY3-215ENST00000515479 GTF2E1P29083 439 aaPredicted RBP10□□□□□ -0.81
RUFY3-215ENST00000515479 WDR44Q5JSH3 913 aa10□□□□□ -0.81
RUFY3-215ENST00000515479 SVOPQ8N4V2 548 aa10□□□□□ -0.81
RUFY3-215ENST00000515479 PLPP7Q8NBV4 271 aa10□□□□□ -0.81
RUFY3-215ENST00000515479 XAGE2Q96GT9 111 aa10□□□□□ -0.81
RUFY3-215ENST00000515479 GMCL1Q96IK5 515 aa10□□□□□ -0.81
RUFY3-215ENST00000515479 CHIC2Q9UKJ5 165 aa10□□□□□ -0.81
RUFY3-215ENST00000515479 H7C1W4 665 aa9.99□□□□□ -0.81
RUFY3-215ENST00000515479 GPR25O00155 361 aa9.99□□□□□ -0.81
RUFY3-215ENST00000515479 STAU1O95793 577 aaKnown RBP9.99□□□□□ -0.81
RUFY3-215ENST00000515479 GAS6Q14393 721 aa9.99□□□□□ -0.81
RUFY3-215ENST00000515479 DBN1Q16643 649 aa9.99□□□□□ -0.81
RUFY3-215ENST00000515479 FOXR1Q6PIV2 292 aa9.99□□□□□ -0.81
RUFY3-215ENST00000515479 WWC1Q8IX03 1113 aa9.99□□□□□ -0.81
RUFY3-215ENST00000515479 SLURP2P0DP57 97 aa9.98□□□□□ -0.81
RUFY3-215ENST00000515479 PHKA2P46019 1235 aa9.98□□□□□ -0.81
RUFY3-215ENST00000515479 MAP7D1Q3KQU3 841 aa9.98□□□□□ -0.81
RUFY3-215ENST00000515479 GNASQ5JWF2 1037 aa9.98□□□□□ -0.81
RUFY3-215ENST00000515479 ZNF385CQ66K41 422 aaPredicted RBP9.98□□□□□ -0.81
RUFY3-215ENST00000515479 TMEM214Q6NUQ4 689 aaKnown RBP9.98□□□□□ -0.81
RUFY3-215ENST00000515479 POM121Q96HA1 1249 aa9.98□□□□□ -0.81
RUFY3-215ENST00000515479 ETNK1Q9HBU6 452 aa9.98□□□□□ -0.81
RUFY3-215ENST00000515479 HRH3Q9Y5N1 445 aa9.98□□□□□ -0.81
RUFY3-215ENST00000515479 RAD21O60216 631 aa9.97□□□□□ -0.81
RUFY3-215ENST00000515479 ADAMTS2O95450 1211 aa9.97□□□□□ -0.81
RUFY3-215ENST00000515479 WHAMMQ8TF30 809 aa9.97□□□□□ -0.81
RUFY3-215ENST00000515479 GTPBP3Q969Y2 492 aaKnown RBP9.97□□□□□ -0.81
RUFY3-215ENST00000515479 FHDC1Q9C0D6 1143 aaPredicted RBP9.97□□□□□ -0.81
RUFY3-215ENST00000515479 F11P03951 625 aa9.96□□□□□ -0.82
RUFY3-215ENST00000515479 TLR1Q15399 786 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms