RNA–Protein interactions for RNA: ENST00000515091.1

SPOCK1-210, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-210ENST00000515091 RAPGEF4Q8WZA2 1011 aa17.4■□□□□ 0.38
SPOCK1-210ENST00000515091 PARP4Q9UKK3 1724 aaKnown RBP17.39■□□□□ 0.37
SPOCK1-210ENST00000515091 CDCA7Q9BWT1 371 aaPredicted RBP17.39■□□□□ 0.37
SPOCK1-210ENST00000515091 THSD7AQ9UPZ6 1657 aa17.39■□□□□ 0.37
SPOCK1-210ENST00000515091 PHACTR3Q96KR7 559 aa17.38■□□□□ 0.37
SPOCK1-210ENST00000515091 PNNQ9H307 717 aaKnown RBP17.38■□□□□ 0.37
SPOCK1-210ENST00000515091 RUNDC1Q96C34 613 aa17.37■□□□□ 0.37
SPOCK1-210ENST00000515091 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.37■□□□□ 0.37
SPOCK1-210ENST00000515091 PKD1L3Q7Z443 1732 aa17.37■□□□□ 0.37
SPOCK1-210ENST00000515091 RXRBP28702 533 aa17.36■□□□□ 0.37
SPOCK1-210ENST00000515091 CCDC146Q8IYE0 955 aa17.36■□□□□ 0.37
SPOCK1-210ENST00000515091 AMOTQ4VCS5 1084 aa17.35■□□□□ 0.37
SPOCK1-210ENST00000515091 PLEKHO1Q53GL0 409 aaPredicted RBP17.35■□□□□ 0.37
SPOCK1-210ENST00000515091 ZCRB1Q8TBF4 217 aaKnown RBP17.35■□□□□ 0.37
SPOCK1-210ENST00000515091 LRRC37A3O60309 1634 aa17.35■□□□□ 0.37
SPOCK1-210ENST00000515091 SHANK3Q9BYB0 1731 aa17.35■□□□□ 0.37
SPOCK1-210ENST00000515091 MTHFSDQ2M296 383 aaKnown RBP17.34■□□□□ 0.37
SPOCK1-210ENST00000515091 TNS2Q63HR2 1409 aa17.34■□□□□ 0.37
SPOCK1-210ENST00000515091 SEPT12Q8IYM1 358 aa17.34■□□□□ 0.37
SPOCK1-210ENST00000515091 EXOC5O00471 708 aa17.33■□□□□ 0.36
SPOCK1-210ENST00000515091 SPG7Q9UQ90 795 aa17.33■□□□□ 0.36
SPOCK1-210ENST00000515091 DDB1Q16531 1140 aa17.32■□□□□ 0.36
SPOCK1-210ENST00000515091 MAPK8IP3Q9UPT6 1336 aa17.31■□□□□ 0.36
SPOCK1-210ENST00000515091 CYP27B1O15528 508 aa17.31■□□□□ 0.36
SPOCK1-210ENST00000515091 NEFMP07197 916 aa17.31■□□□□ 0.36
SPOCK1-210ENST00000515091 RGS12O14924 1447 aa17.3■□□□□ 0.36
SPOCK1-210ENST00000515091 APAF1O14727 1248 aa17.3■□□□□ 0.36
SPOCK1-210ENST00000515091 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
SPOCK1-210ENST00000515091 NFE2L2Q16236 605 aa17.3■□□□□ 0.36
SPOCK1-210ENST00000515091 ZNF530Q6P9A1 599 aaPredicted RBP17.3■□□□□ 0.36
SPOCK1-210ENST00000515091 GAS2L2Q8NHY3 880 aa17.3■□□□□ 0.36
SPOCK1-210ENST00000515091 PCDH11XQ9BZA7 1347 aa17.29■□□□□ 0.36
SPOCK1-210ENST00000515091 PCDH11YQ9BZA8 1340 aa17.29■□□□□ 0.36
SPOCK1-210ENST00000515091 PHKG2P15735 406 aa17.29■□□□□ 0.36
SPOCK1-210ENST00000515091 BRWD3Q6RI45 1802 aa17.28■□□□□ 0.36
SPOCK1-210ENST00000515091 A0A0G2JS52 829 aa17.28■□□□□ 0.36
SPOCK1-210ENST00000515091 MYT1Q01538 1121 aa17.28■□□□□ 0.36
SPOCK1-210ENST00000515091 AKAP4Q5JQC9 854 aa17.28■□□□□ 0.36
SPOCK1-210ENST00000515091 IFNL2Q8IZJ0 200 aa17.28■□□□□ 0.36
SPOCK1-210ENST00000515091 MARCH10Q8NA82 808 aaPredicted RBP17.28■□□□□ 0.36
SPOCK1-210ENST00000515091 DDX54Q8TDD1 881 aaKnown RBP17.28■□□□□ 0.36
SPOCK1-210ENST00000515091 NKX1-1Q15270 411 aaPredicted RBP17.27■□□□□ 0.36
SPOCK1-210ENST00000515091 RRP7AQ9Y3A4 280 aaKnown RBP17.27■□□□□ 0.36
SPOCK1-210ENST00000515091 DLG5Q8TDM6 1919 aa17.27■□□□□ 0.35
SPOCK1-210ENST00000515091 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
SPOCK1-210ENST00000515091 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
SPOCK1-210ENST00000515091 MAP3K5Q99683 1374 aa17.26■□□□□ 0.35
SPOCK1-210ENST00000515091 GNAT3A8MTJ3 354 aa17.25■□□□□ 0.35
SPOCK1-210ENST00000515091 RIPK4P57078 832 aa17.25■□□□□ 0.35
SPOCK1-210ENST00000515091 C1orf141Q5JVX7 400 aa17.25■□□□□ 0.35
SPOCK1-210ENST00000515091 TRIM35Q9UPQ4 493 aa17.25■□□□□ 0.35
SPOCK1-210ENST00000515091 ADAMTS7Q9UKP4 1686 aa17.25■□□□□ 0.35
SPOCK1-210ENST00000515091 SENP3-EIF4A1A0A087X0R7 540 aa17.24■□□□□ 0.35
SPOCK1-210ENST00000515091 HTATSF1O43719 755 aaKnown RBP17.24■□□□□ 0.35
SPOCK1-210ENST00000515091 KRT27Q7Z3Y8 459 aa17.24■□□□□ 0.35
SPOCK1-210ENST00000515091 KDM6AO15550 1401 aaPredicted RBP17.23■□□□□ 0.35
SPOCK1-210ENST00000515091 HSP90AB1P08238 724 aaKnown RBP17.23■□□□□ 0.35
SPOCK1-210ENST00000515091 NEUROD2Q15784 382 aa17.23■□□□□ 0.35
SPOCK1-210ENST00000515091 IL17REQ8NFR9 667 aa17.23■□□□□ 0.35
SPOCK1-210ENST00000515091 LGR6Q9HBX8 967 aa17.23■□□□□ 0.35
SPOCK1-210ENST00000515091 BCL9O00512 1426 aa17.22■□□□□ 0.35
SPOCK1-210ENST00000515091 RNMTO43148 476 aaKnown RBP17.22■□□□□ 0.35
SPOCK1-210ENST00000515091 CCDC27Q2M243 656 aa17.22■□□□□ 0.35
SPOCK1-210ENST00000515091 MPRIPQ6WCQ1 1025 aa17.22■□□□□ 0.35
SPOCK1-210ENST00000515091 NGEFQ8N5V2 710 aa17.22■□□□□ 0.35
SPOCK1-210ENST00000515091 DCAF5Q96JK2 942 aa17.22■□□□□ 0.35
SPOCK1-210ENST00000515091 SCN11AQ9UI33 1791 aa17.21■□□□□ 0.35
SPOCK1-210ENST00000515091 CEMIPQ8WUJ3 1361 aa17.21■□□□□ 0.35
SPOCK1-210ENST00000515091 DCTN1Q14203 1278 aa17.21■□□□□ 0.35
SPOCK1-210ENST00000515091 FAM182BQ5T319 152 aa17.21■□□□□ 0.35
SPOCK1-210ENST00000515091 TOGARAM1Q9Y4F4 1720 aa17.21■□□□□ 0.35
SPOCK1-210ENST00000515091 LMOD3Q0VAK6 560 aa17.2■□□□□ 0.34
SPOCK1-210ENST00000515091 MCM10Q7L590 875 aa17.2■□□□□ 0.34
SPOCK1-210ENST00000515091 VIRMAQ69YN4 1812 aaKnown RBP17.19■□□□□ 0.34
SPOCK1-210ENST00000515091 WWC1Q8IX03 1113 aa17.19■□□□□ 0.34
SPOCK1-210ENST00000515091 RTF1Q92541 710 aaKnown RBP17.19■□□□□ 0.34
SPOCK1-210ENST00000515091 SALL2Q9Y467 1007 aaPredicted RBP17.19■□□□□ 0.34
SPOCK1-210ENST00000515091 ZNF521Q96K83 1311 aa17.19■□□□□ 0.34
SPOCK1-210ENST00000515091 HNRNPUQ00839 825 aaKnown RBP eCLIP17.18■□□□□ 0.34
SPOCK1-210ENST00000515091 THUMPD2Q9BTF0 503 aaKnown RBP17.18■□□□□ 0.34
SPOCK1-210ENST00000515091 MRC1P22897 1456 aa17.18■□□□□ 0.34
SPOCK1-210ENST00000515091 ERVV-2B6SEH9 535 aa17.17■□□□□ 0.34
SPOCK1-210ENST00000515091 FAM196AQ6ZSG2 479 aa17.17■□□□□ 0.34
SPOCK1-210ENST00000515091 DOT1LQ8TEK3 1739 aa17.17■□□□□ 0.34
SPOCK1-210ENST00000515091 SBF2Q86WG5 1849 aa17.16■□□□□ 0.34
SPOCK1-210ENST00000515091 SIPA1L3O60292 1781 aaPredicted RBP17.15■□□□□ 0.34
SPOCK1-210ENST00000515091 ITGB4P16144 1822 aa17.15■□□□□ 0.34
SPOCK1-210ENST00000515091 ACSBG1Q96GR2 724 aa17.15■□□□□ 0.34
SPOCK1-210ENST00000515091 SLC52A2Q9HAB3 445 aa17.15■□□□□ 0.34
SPOCK1-210ENST00000515091 PRIM1P49642 420 aaKnown RBP17.14■□□□□ 0.33
SPOCK1-210ENST00000515091 NHSQ6T4R5 1651 aa17.13■□□□□ 0.33
SPOCK1-210ENST00000515091 KCNQ2O43526 872 aa17.13■□□□□ 0.33
SPOCK1-210ENST00000515091 CABP4P57796 275 aa17.13■□□□□ 0.33
SPOCK1-210ENST00000515091 TEFQ10587 303 aa17.13■□□□□ 0.33
SPOCK1-210ENST00000515091 WDR63Q8IWG1 891 aa17.13■□□□□ 0.33
SPOCK1-210ENST00000515091 NFATC2IPQ8NCF5 419 aa17.13■□□□□ 0.33
SPOCK1-210ENST00000515091 TAF7Q15545 349 aaPredicted RBP17.12■□□□□ 0.33
SPOCK1-210ENST00000515091 PTF1AQ7RTS3 328 aa17.12■□□□□ 0.33
SPOCK1-210ENST00000515091 PIGBQ92521 554 aa17.12■□□□□ 0.33
SPOCK1-210ENST00000515091 IL16Q14005 1332 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms