RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 IRF7Q92985 503 aa7.18□□□□□ -1.26
CAST-242ENST00000515063 SOBPA7XYQ1 873 aa7.17□□□□□ -1.26
CAST-242ENST00000515063 H3BM21 787 aa7.17□□□□□ -1.26
CAST-242ENST00000515063 GPC1P35052 558 aa7.17□□□□□ -1.26
CAST-242ENST00000515063 NLRP3Q96P20 1036 aa7.17□□□□□ -1.26
CAST-242ENST00000515063 FIGNL2A6NMB9 653 aa7.16□□□□□ -1.26
CAST-242ENST00000515063 GNRH1P01148 92 aa7.16□□□□□ -1.26
CAST-242ENST00000515063 CTSOP43234 321 aaPredicted RBP7.16□□□□□ -1.26
CAST-242ENST00000515063 PHTF2Q8N3S3 785 aa7.16□□□□□ -1.26
CAST-242ENST00000515063 RNF217Q8TC41 542 aa7.16□□□□□ -1.26
CAST-242ENST00000515063 POM121Q96HA1 1249 aa7.16□□□□□ -1.26
CAST-242ENST00000515063 CCDC85AQ96PX6 553 aaPredicted RBP7.16□□□□□ -1.26
CAST-242ENST00000515063 MEN1O00255 615 aa7.15□□□□□ -1.26
CAST-242ENST00000515063 TRAK2O60296 914 aa7.15□□□□□ -1.26
CAST-242ENST00000515063 SCTRP47872 440 aa7.15□□□□□ -1.26
CAST-242ENST00000515063 RNF144AP50876 292 aaPredicted RBP7.15□□□□□ -1.26
CAST-242ENST00000515063 CLN3Q13286 438 aa7.15□□□□□ -1.26
CAST-242ENST00000515063 ESCO1Q5FWF5 840 aa7.15□□□□□ -1.26
CAST-242ENST00000515063 LYSMD3Q7Z3D4 306 aa7.15□□□□□ -1.26
CAST-242ENST00000515063 KDF1Q8NAX2 398 aaPredicted RBP7.15□□□□□ -1.26
CAST-242ENST00000515063 OSBPL3Q9H4L5 887 aa7.15□□□□□ -1.26
CAST-242ENST00000515063 A0A1W2PRU2 124 aa7.14□□□□□ -1.27
CAST-242ENST00000515063 NFATC2IPQ8NCF5 419 aa7.14□□□□□ -1.27
CAST-242ENST00000515063 CHIC2Q9UKJ5 165 aa7.14□□□□□ -1.27
CAST-242ENST00000515063 LZTS3O60299 673 aaPredicted RBP7.13□□□□□ -1.27
CAST-242ENST00000515063 GTF2E1P29083 439 aaPredicted RBP7.13□□□□□ -1.27
CAST-242ENST00000515063 PTSQ03393 145 aa7.13□□□□□ -1.27
CAST-242ENST00000515063 OXLD1Q5BKU9 147 aa7.13□□□□□ -1.27
CAST-242ENST00000515063 SLC27A3Q5K4L6 730 aa7.13□□□□□ -1.27
CAST-242ENST00000515063 LCE2AQ5TA79 106 aaPredicted RBP7.13□□□□□ -1.27
CAST-242ENST00000515063 FOXD4L5Q5VV16 416 aaPredicted RBP7.13□□□□□ -1.27
CAST-242ENST00000515063 PROSER2Q86WR7 435 aaPredicted RBP7.13□□□□□ -1.27
CAST-242ENST00000515063 PLPP7Q8NBV4 271 aa7.13□□□□□ -1.27
CAST-242ENST00000515063 ALG2Q9H553 416 aa7.13□□□□□ -1.27
CAST-242ENST00000515063 ARHGEF10LQ9HCE6 1279 aa7.13□□□□□ -1.27
CAST-242ENST00000515063 WIPF1O43516 503 aa7.12□□□□□ -1.27
CAST-242ENST00000515063 PPFIA3O75145 1194 aa7.12□□□□□ -1.27
CAST-242ENST00000515063 VEGFBP49765 207 aa7.12□□□□□ -1.27
CAST-242ENST00000515063 CDCA7Q9BWT1 371 aaPredicted RBP7.12□□□□□ -1.27
CAST-242ENST00000515063 VSIG8P0DPA2 414 aa7.11□□□□□ -1.27
CAST-242ENST00000515063 INSM1Q01101 510 aaPredicted RBP7.11□□□□□ -1.27
CAST-242ENST00000515063 CCDC155Q8N6L0 562 aa7.11□□□□□ -1.27
CAST-242ENST00000515063 ESYT1Q9BSJ8 1104 aa7.11□□□□□ -1.27
CAST-242ENST00000515063 SLC35F4A4IF30 521 aa7.1□□□□□ -1.27
CAST-242ENST00000515063 SKIP12755 728 aa7.1□□□□□ -1.27
CAST-242ENST00000515063 EML3Q32P44 896 aa7.1□□□□□ -1.27
CAST-242ENST00000515063 CNKSR1Q969H4 720 aa7.1□□□□□ -1.27
CAST-242ENST00000515063 A6NJR5 290 aa7.09□□□□□ -1.27
CAST-242ENST00000515063 WDR44Q5JSH3 913 aa7.09□□□□□ -1.27
CAST-242ENST00000515063 PRICKLE2Q7Z3G6 844 aa7.09□□□□□ -1.27
CAST-242ENST00000515063 CLUAP1Q96AJ1 413 aa7.09□□□□□ -1.27
CAST-242ENST00000515063 NOD1Q9Y239 953 aa7.09□□□□□ -1.27
CAST-242ENST00000515063 ITGA6P23229 1130 aa7.08□□□□□ -1.28
CAST-242ENST00000515063 RAB6BQ9NRW1 208 aa7.08□□□□□ -1.28
CAST-242ENST00000515063 POM121CA8CG34 1229 aa7.07□□□□□ -1.28
CAST-242ENST00000515063 SPATA31C2B4DYI2 1134 aa7.07□□□□□ -1.28
CAST-242ENST00000515063 TSGA10IPQ3SY00 556 aa7.07□□□□□ -1.28
CAST-242ENST00000515063 GNASQ5JWF2 1037 aa7.07□□□□□ -1.28
CAST-242ENST00000515063 HDGFL1Q5TGJ6 251 aa7.07□□□□□ -1.28
CAST-242ENST00000515063 TAS1R3Q7RTX0 852 aa7.07□□□□□ -1.28
CAST-242ENST00000515063 NANOS1Q8WY41 292 aaKnown RBP7.07□□□□□ -1.28
CAST-242ENST00000515063 XAGE2Q96GT9 111 aa7.07□□□□□ -1.28
CAST-242ENST00000515063 GMCL1Q96IK5 515 aa7.07□□□□□ -1.28
CAST-242ENST00000515063 ZSCAN10Q96SZ4 725 aaPredicted RBP7.07□□□□□ -1.28
CAST-242ENST00000515063 GRIP2Q9C0E4 1043 aa7.07□□□□□ -1.28
CAST-242ENST00000515063 ERBB4Q15303 1308 aa7.06□□□□□ -1.28
CAST-242ENST00000515063 USP17L5A8MUK1 530 aa7.06□□□□□ -1.28
CAST-242ENST00000515063 PIK3CDO00329 1044 aa7.06□□□□□ -1.28
CAST-242ENST00000515063 WASLO00401 505 aaPredicted RBP7.06□□□□□ -1.28
CAST-242ENST00000515063 IL2RAP01589 272 aa7.06□□□□□ -1.28
CAST-242ENST00000515063 GMPRP36959 345 aa7.06□□□□□ -1.28
CAST-242ENST00000515063 CENPCQ03188 943 aa7.06□□□□□ -1.28
CAST-242ENST00000515063 TRIM50Q86XT4 487 aa7.06□□□□□ -1.28
CAST-242ENST00000515063 FNBP4Q8N3X1 1017 aaPredicted RBP7.06□□□□□ -1.28
CAST-242ENST00000515063 DYRK1BQ9Y463 629 aa7.06□□□□□ -1.28
CAST-242ENST00000515063 SENP3-EIF4A1A0A087X0R7 540 aa7.05□□□□□ -1.28
CAST-242ENST00000515063 H7C1W4 665 aa7.05□□□□□ -1.28
CAST-242ENST00000515063 RHOQP17081 205 aa7.05□□□□□ -1.28
CAST-242ENST00000515063 GDF10P55107 478 aa7.05□□□□□ -1.28
CAST-242ENST00000515063 NCOA4Q13772 614 aa7.05□□□□□ -1.28
CAST-242ENST00000515063 TMEM214Q6NUQ4 689 aaKnown RBP7.05□□□□□ -1.28
CAST-242ENST00000515063 NBPF10Q6P3W6 841 aaKnown RBP7.05□□□□□ -1.28
CAST-242ENST00000515063 SV2AQ7L0J3 742 aa7.05□□□□□ -1.28
CAST-242ENST00000515063 PLEKHM2Q8IWE5 1019 aa7.05□□□□□ -1.28
CAST-242ENST00000515063 NBPF15Q8N660 670 aa7.05□□□□□ -1.28
CAST-242ENST00000515063 GLMNQ92990 594 aa7.05□□□□□ -1.28
CAST-242ENST00000515063 ETNK1Q9HBU6 452 aa7.05□□□□□ -1.28
CAST-242ENST00000515063 CDC14CA4D256 554 aa7.04□□□□□ -1.28
CAST-242ENST00000515063 FAM181BA6NEQ2 426 aa7.04□□□□□ -1.28
CAST-242ENST00000515063 ATP9BO43861 1147 aa7.04□□□□□ -1.28
CAST-242ENST00000515063 INHAP05111 366 aa7.04□□□□□ -1.28
CAST-242ENST00000515063 ATP1A2P50993 1020 aa7.04□□□□□ -1.28
CAST-242ENST00000515063 PSME1Q06323 249 aa7.04□□□□□ -1.28
CAST-242ENST00000515063 POU4F2Q12837 409 aa7.04□□□□□ -1.28
CAST-242ENST00000515063 TLR1Q15399 786 aa7.04□□□□□ -1.28
CAST-242ENST00000515063 FOXR1Q6PIV2 292 aa7.04□□□□□ -1.28
CAST-242ENST00000515063 TIMMDC1Q9NPL8 285 aa7.04□□□□□ -1.28
CAST-242ENST00000515063 BACH1O14867 736 aa7.03□□□□□ -1.28
CAST-242ENST00000515063 GTF2IP78347 998 aa7.03□□□□□ -1.28
CAST-242ENST00000515063 LCE2CQ5TA81 110 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms