RNA–Protein interactions for RNA: ENST00000514967.5

PROM1-218, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-218ENST00000514967 WDR43Q15061 677 aaKnown RBP eCLIP21.59■■□□□ 1.05
PROM1-218ENST00000514967 CCDC184Q52MB2 194 aa21.59■■□□□ 1.05
PROM1-218ENST00000514967 TNS2Q63HR2 1409 aa21.59■■□□□ 1.05
PROM1-218ENST00000514967 SEPT12Q8IYM1 358 aa21.59■■□□□ 1.05
PROM1-218ENST00000514967 PKD1L3Q7Z443 1732 aa21.58■■□□□ 1.05
PROM1-218ENST00000514967 BCL9O00512 1426 aa21.58■■□□□ 1.05
PROM1-218ENST00000514967 AEBP1Q8IUX7 1158 aa21.58■■□□□ 1.05
PROM1-218ENST00000514967 MIER1Q8N108 512 aa21.58■■□□□ 1.05
PROM1-218ENST00000514967 DDB1Q16531 1140 aa21.57■■□□□ 1.04
PROM1-218ENST00000514967 ZCRB1Q8TBF4 217 aaKnown RBP21.57■■□□□ 1.04
PROM1-218ENST00000514967 SPG7Q9UQ90 795 aa21.57■■□□□ 1.04
PROM1-218ENST00000514967 RGS12O14924 1447 aa21.56■■□□□ 1.04
PROM1-218ENST00000514967 LRRC37A3O60309 1634 aa21.56■■□□□ 1.04
PROM1-218ENST00000514967 PLEKHO1Q53GL0 409 aaPredicted RBP21.56■■□□□ 1.04
PROM1-218ENST00000514967 PLEKHF1Q96S99 279 aa21.56■■□□□ 1.04
PROM1-218ENST00000514967 HMOX1P09601 288 aa21.55■■□□□ 1.04
PROM1-218ENST00000514967 ADAMTS8Q9UP79 889 aa21.55■■□□□ 1.04
PROM1-218ENST00000514967 PCDH11XQ9BZA7 1347 aa21.54■■□□□ 1.04
PROM1-218ENST00000514967 PCDH11YQ9BZA8 1340 aa21.54■■□□□ 1.04
PROM1-218ENST00000514967 PRKAR2BP31323 418 aa21.53■■□□□ 1.04
PROM1-218ENST00000514967 NCBP3Q53F19 620 aaKnown RBP21.53■■□□□ 1.04
PROM1-218ENST00000514967 NEFMP07197 916 aa21.52■■□□□ 1.04
PROM1-218ENST00000514967 NKX1-1Q15270 411 aaPredicted RBP21.52■■□□□ 1.04
PROM1-218ENST00000514967 PDE3BQ13370 1112 aa21.51■■□□□ 1.03
PROM1-218ENST00000514967 KRT27Q7Z3Y8 459 aa21.51■■□□□ 1.03
PROM1-218ENST00000514967 GAS2L2Q8NHY3 880 aa21.51■■□□□ 1.03
PROM1-218ENST00000514967 RUNDC1Q96C34 613 aa21.51■■□□□ 1.03
PROM1-218ENST00000514967 SHANK3Q9BYB0 1731 aa21.49■■□□□ 1.03
PROM1-218ENST00000514967 HSP90AB1P08238 724 aaKnown RBP21.49■■□□□ 1.03
PROM1-218ENST00000514967 IFNL2Q8IZJ0 200 aa21.49■■□□□ 1.03
PROM1-218ENST00000514967 CYP27B1O15528 508 aa21.48■■□□□ 1.03
PROM1-218ENST00000514967 AKAP4Q5JQC9 854 aa21.48■■□□□ 1.03
PROM1-218ENST00000514967 MARCH10Q8NA82 808 aaPredicted RBP21.48■■□□□ 1.03
PROM1-218ENST00000514967 PHACTR3Q96KR7 559 aa21.48■■□□□ 1.03
PROM1-218ENST00000514967 BRWD3Q6RI45 1802 aa21.48■■□□□ 1.03
PROM1-218ENST00000514967 A0A0G2JS52 829 aa21.47■■□□□ 1.03
PROM1-218ENST00000514967 HTATSF1O43719 755 aaKnown RBP21.47■■□□□ 1.03
PROM1-218ENST00000514967 PHKG2P15735 406 aa21.47■■□□□ 1.03
PROM1-218ENST00000514967 MYT1Q01538 1121 aa21.47■■□□□ 1.03
PROM1-218ENST00000514967 MTHFSDQ2M296 383 aaKnown RBP21.47■■□□□ 1.03
PROM1-218ENST00000514967 NGEFQ8N5V2 710 aa21.47■■□□□ 1.03
PROM1-218ENST00000514967 FAM196AQ6ZSG2 479 aa21.46■■□□□ 1.03
PROM1-218ENST00000514967 MAPK8IP3Q9UPT6 1336 aa21.46■■□□□ 1.03
PROM1-218ENST00000514967 ZNF530Q6P9A1 599 aaPredicted RBP21.45■■□□□ 1.02
PROM1-218ENST00000514967 NFE2L2Q16236 605 aa21.44■■□□□ 1.02
PROM1-218ENST00000514967 C1orf141Q5JVX7 400 aa21.44■■□□□ 1.02
PROM1-218ENST00000514967 DCAF5Q96JK2 942 aa21.44■■□□□ 1.02
PROM1-218ENST00000514967 ADAMTS7Q9UKP4 1686 aa21.43■■□□□ 1.02
PROM1-218ENST00000514967 DDX54Q8TDD1 881 aaKnown RBP21.42■■□□□ 1.02
PROM1-218ENST00000514967 MAP3K5Q99683 1374 aa21.41■■□□□ 1.02
PROM1-218ENST00000514967 GNAT3A8MTJ3 354 aa21.41■■□□□ 1.02
PROM1-218ENST00000514967 TMPOP42166 694 aaKnown RBP21.41■■□□□ 1.02
PROM1-218ENST00000514967 ERVV-2B6SEH9 535 aa21.4■■□□□ 1.02
PROM1-218ENST00000514967 FAM9BQ8IZU0 186 aa21.4■■□□□ 1.02
PROM1-218ENST00000514967 CEMIPQ8WUJ3 1361 aa21.39■■□□□ 1.02
PROM1-218ENST00000514967 LMOD3Q0VAK6 560 aa21.39■■□□□ 1.01
PROM1-218ENST00000514967 CCDC27Q2M243 656 aa21.38■■□□□ 1.01
PROM1-218ENST00000514967 CCDC146Q8IYE0 955 aa21.37■■□□□ 1.01
PROM1-218ENST00000514967 KDM6AO15550 1401 aaPredicted RBP21.37■■□□□ 1.01
PROM1-218ENST00000514967 MRC1P22897 1456 aa21.35■■□□□ 1.01
PROM1-218ENST00000514967 APAF1O14727 1248 aa21.35■■□□□ 1.01
PROM1-218ENST00000514967 RNMTO43148 476 aaKnown RBP21.35■■□□□ 1.01
PROM1-218ENST00000514967 RIPK4P57078 832 aa21.35■■□□□ 1.01
PROM1-218ENST00000514967 CCDC125Q86Z20 511 aa21.35■■□□□ 1.01
PROM1-218ENST00000514967 SCN11AQ9UI33 1791 aa21.35■■□□□ 1.01
PROM1-218ENST00000514967 RTF1Q92541 710 aaKnown RBP21.34■■□□□ 1.01
PROM1-218ENST00000514967 BCL11BQ9C0K0 894 aaPredicted RBP21.34■■□□□ 1.01
PROM1-218ENST00000514967 SBF2Q86WG5 1849 aa21.34■■□□□ 1.01
PROM1-218ENST00000514967 IL17REQ8NFR9 667 aa21.33■■□□□ 1.01
PROM1-218ENST00000514967 NHSQ6T4R5 1651 aa21.33■■□□□ 1
PROM1-218ENST00000514967 DLG5Q8TDM6 1919 aa21.32■■□□□ 1
PROM1-218ENST00000514967 MPRIPQ6WCQ1 1025 aa21.32■■□□□ 1
PROM1-218ENST00000514967 SLC52A2Q9HAB3 445 aa21.31■■□□□ 1
PROM1-218ENST00000514967 BABAM1Q9NWV8 329 aa21.31■■□□□ 1
PROM1-218ENST00000514967 TRIM35Q9UPQ4 493 aa21.31■■□□□ 1
PROM1-218ENST00000514967 TOGARAM1Q9Y4F4 1720 aa21.31■■□□□ 1
PROM1-218ENST00000514967 ILDR2Q71H61 639 aa21.3■■□□□ 1
PROM1-218ENST00000514967 LGR6Q9HBX8 967 aa21.3■■□□□ 1
PROM1-218ENST00000514967 PRIM1P49642 420 aaKnown RBP21.29■■□□□ 1
PROM1-218ENST00000514967 CALD1Q05682 793 aaKnown RBP21.29■■□□□ 1
PROM1-218ENST00000514967 FAM182BQ5T319 152 aa21.29■■□□□ 1
PROM1-218ENST00000514967 DOT1LQ8TEK3 1739 aa21.29■■□□□ 1
PROM1-218ENST00000514967 CABP4P57796 275 aa21.27■■□□□ 1
PROM1-218ENST00000514967 TMOD3Q9NYL9 352 aa21.27■■□□□ 1
PROM1-218ENST00000514967 EP400Q96L91 3159 aa21.27■■□□□ 1
PROM1-218ENST00000514967 ITGB4P16144 1822 aa21.27■□□□□ 0.99
PROM1-218ENST00000514967 VIRMAQ69YN4 1812 aaKnown RBP21.27■□□□□ 0.99
PROM1-218ENST00000514967 PLSCR1O15162 318 aa21.26■□□□□ 0.99
PROM1-218ENST00000514967 TEFQ10587 303 aa21.26■□□□□ 0.99
PROM1-218ENST00000514967 PIGBQ92521 554 aa21.26■□□□□ 0.99
PROM1-218ENST00000514967 IL16Q14005 1332 aa21.26■□□□□ 0.99
PROM1-218ENST00000514967 SIPA1L3O60292 1781 aaPredicted RBP21.25■□□□□ 0.99
PROM1-218ENST00000514967 KCNQ2O43526 872 aa21.25■□□□□ 0.99
PROM1-218ENST00000514967 TAF7Q15545 349 aaPredicted RBP21.25■□□□□ 0.99
PROM1-218ENST00000514967 MCM10Q7L590 875 aa21.25■□□□□ 0.99
PROM1-218ENST00000514967 WDR63Q8IWG1 891 aa21.25■□□□□ 0.99
PROM1-218ENST00000514967 WWC1Q8IX03 1113 aa21.25■□□□□ 0.99
PROM1-218ENST00000514967 NFATC2IPQ8NCF5 419 aa21.25■□□□□ 0.99
PROM1-218ENST00000514967 SMARCC1Q92922 1105 aaPredicted RBP21.25■□□□□ 0.99
PROM1-218ENST00000514967 RRP7AQ9Y3A4 280 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms