RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 NBPF20Q3BBV1 942 aa9.27□□□□□ -0.92
PDLIM5-219ENST00000514743 RLBP1P12271 317 aa9.27□□□□□ -0.93
PDLIM5-219ENST00000514743 FAM135BQ49AJ0 1406 aa9.27□□□□□ -0.93
PDLIM5-219ENST00000514743 COG6Q9Y2V7 657 aa9.27□□□□□ -0.93
PDLIM5-219ENST00000514743 PPIP5K1Q6PFW1 1433 aa9.26□□□□□ -0.93
PDLIM5-219ENST00000514743 NALCNQ8IZF0 1738 aa9.26□□□□□ -0.93
PDLIM5-219ENST00000514743 RGL2O15211 777 aa9.26□□□□□ -0.93
PDLIM5-219ENST00000514743 FRAT2O75474 233 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-219ENST00000514743 CEP120Q8N960 986 aa9.26□□□□□ -0.93
PDLIM5-219ENST00000514743 YY1AP1Q9H869 796 aa9.26□□□□□ -0.93
PDLIM5-219ENST00000514743 TMPOP42166 694 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-219ENST00000514743 HDGFL2Q7Z4V5 671 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-219ENST00000514743 CLUAP1Q96AJ1 413 aa9.26□□□□□ -0.93
PDLIM5-219ENST00000514743 LMOD3Q0VAK6 560 aa9.26□□□□□ -0.93
PDLIM5-219ENST00000514743 EDC4Q6P2E9 1401 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-219ENST00000514743 SPDYE4A6NLX3 237 aa9.25□□□□□ -0.93
PDLIM5-219ENST00000514743 HSP90AB3PQ58FF7 597 aa9.25□□□□□ -0.93
PDLIM5-219ENST00000514743 GOLGA6L3A6NEY3 463 aa9.25□□□□□ -0.93
PDLIM5-219ENST00000514743 ADAMTS13Q76LX8 1427 aa9.25□□□□□ -0.93
PDLIM5-219ENST00000514743 TSR2Q969E8 191 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-219ENST00000514743 BCL2L13Q9BXK5 485 aa9.25□□□□□ -0.93
PDLIM5-219ENST00000514743 CDK12Q9NYV4 1490 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-219ENST00000514743 U2SURPO15042 1029 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-219ENST00000514743 FBLN1P23142 703 aa9.24□□□□□ -0.93
PDLIM5-219ENST00000514743 KCNJ4P48050 445 aa9.24□□□□□ -0.93
PDLIM5-219ENST00000514743 CCDC94Q9BW85 323 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-219ENST00000514743 MYH16Q9H6N6 1097 aa9.24□□□□□ -0.93
PDLIM5-219ENST00000514743 POLKQ9UBT6 870 aa9.24□□□□□ -0.93
PDLIM5-219ENST00000514743 TNRQ92752 1358 aa9.24□□□□□ -0.93
PDLIM5-219ENST00000514743 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-219ENST00000514743 LOC102724159A0A0B4J2E5 919 aa9.24□□□□□ -0.93
PDLIM5-219ENST00000514743 WASLO00401 505 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-219ENST00000514743 GOLIM4O00461 696 aa9.24□□□□□ -0.93
PDLIM5-219ENST00000514743 PWP2Q15269 919 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-219ENST00000514743 FAM161AQ3B820 660 aa9.24□□□□□ -0.93
PDLIM5-219ENST00000514743 CC2D2BQ6DHV5 1058 aa9.24□□□□□ -0.93
PDLIM5-219ENST00000514743 TMEM2Q9UHN6 1383 aa9.23□□□□□ -0.93
PDLIM5-219ENST00000514743 DIAPH1O60610 1272 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-219ENST00000514743 ECM2O94769 699 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-219ENST00000514743 PCDHB15Q9Y5E8 787 aa9.23□□□□□ -0.93
PDLIM5-219ENST00000514743 RGPD8O14715 1765 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-219ENST00000514743 RGPD1P0DJD0 1748 aa9.23□□□□□ -0.93
PDLIM5-219ENST00000514743 PEAK1Q9H792 1746 aa9.23□□□□□ -0.93
PDLIM5-219ENST00000514743 IL16Q14005 1332 aa9.23□□□□□ -0.93
PDLIM5-219ENST00000514743 ZNF500O60304 480 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-219ENST00000514743 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.23□□□□□ -0.93
PDLIM5-219ENST00000514743 FMN2Q9NZ56 1722 aa9.22□□□□□ -0.93
PDLIM5-219ENST00000514743 NCKAP5LQ9HCH0 1330 aa9.22□□□□□ -0.93
PDLIM5-219ENST00000514743 RIMS1Q86UR5 1692 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-219ENST00000514743 TRIM6-TRIM34B2RNG4 842 aa9.22□□□□□ -0.93
PDLIM5-219ENST00000514743 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.22□□□□□ -0.93
PDLIM5-219ENST00000514743 SIRT1Q96EB6 747 aa9.22□□□□□ -0.93
PDLIM5-219ENST00000514743 TRIM34Q9BYJ4 488 aa9.22□□□□□ -0.93
PDLIM5-219ENST00000514743 FER1L4A9Z1Z3 1794 aa9.22□□□□□ -0.93
PDLIM5-219ENST00000514743 ROBO2Q9HCK4 1378 aa9.22□□□□□ -0.93
PDLIM5-219ENST00000514743 PRR36Q9H6K5 1346 aa9.22□□□□□ -0.93
PDLIM5-219ENST00000514743 CT47B1P0C2W7 299 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-219ENST00000514743 EXOSC9Q06265 439 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-219ENST00000514743 TXNDC2Q86VQ3 553 aa9.22□□□□□ -0.93
PDLIM5-219ENST00000514743 SPRYD3Q8NCJ5 442 aa9.22□□□□□ -0.93
PDLIM5-219ENST00000514743 AATKQ6ZMQ8 1374 aa9.22□□□□□ -0.93
PDLIM5-219ENST00000514743 MAFGO15525 162 aa9.21□□□□□ -0.93
PDLIM5-219ENST00000514743 NBPF11Q86T75 865 aa9.21□□□□□ -0.93
PDLIM5-219ENST00000514743 MAPK8IP3Q9UPT6 1336 aa9.21□□□□□ -0.93
PDLIM5-219ENST00000514743 NME9Q86XW9 330 aa9.21□□□□□ -0.94
PDLIM5-219ENST00000514743 ZRANB1Q9UGI0 708 aa9.21□□□□□ -0.94
PDLIM5-219ENST00000514743 TTC36A6NLP5 189 aa9.2□□□□□ -0.94
PDLIM5-219ENST00000514743 FCHSD2O94868 740 aa9.2□□□□□ -0.94
PDLIM5-219ENST00000514743 MVPQ14764 893 aaKnown RBP9.2□□□□□ -0.94
PDLIM5-219ENST00000514743 ZBTB12Q9Y330 459 aaPredicted RBP9.2□□□□□ -0.94
PDLIM5-219ENST00000514743 EMILIN1Q9Y6C2 1016 aa9.2□□□□□ -0.94
PDLIM5-219ENST00000514743 PTPRUQ92729 1446 aa9.2□□□□□ -0.94
PDLIM5-219ENST00000514743 SLIT1O75093 1534 aa9.2□□□□□ -0.94
PDLIM5-219ENST00000514743 NUDT16Q96DE0 195 aaKnown RBP9.2□□□□□ -0.94
PDLIM5-219ENST00000514743 MARF1Q9Y4F3 1742 aaKnown RBP9.2□□□□□ -0.94
PDLIM5-219ENST00000514743 USP19O94966 1318 aa9.2□□□□□ -0.94
PDLIM5-219ENST00000514743 ERBB4Q15303 1308 aa9.2□□□□□ -0.94
PDLIM5-219ENST00000514743 XRCC6P12956 609 aaKnown RBP eCLIP9.2□□□□□ -0.94
PDLIM5-219ENST00000514743 IL13P35225 146 aa9.2□□□□□ -0.94
PDLIM5-219ENST00000514743 SSH1Q8WYL5 1049 aa9.2□□□□□ -0.94
PDLIM5-219ENST00000514743 PLEKHG1Q9ULL1 1385 aa9.19□□□□□ -0.94
PDLIM5-219ENST00000514743 ZKSCAN2Q63HK3 967 aa9.19□□□□□ -0.94
PDLIM5-219ENST00000514743 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.19□□□□□ -0.94
PDLIM5-219ENST00000514743 PANK2Q9BZ23 570 aa9.19□□□□□ -0.94
PDLIM5-219ENST00000514743 TRIM27P14373 513 aa9.19□□□□□ -0.94
PDLIM5-219ENST00000514743 PRKAR2BP31323 418 aa9.19□□□□□ -0.94
PDLIM5-219ENST00000514743 TERF1P54274 439 aa9.19□□□□□ -0.94
PDLIM5-219ENST00000514743 PHACTR3Q96KR7 559 aa9.19□□□□□ -0.94
PDLIM5-219ENST00000514743 ARHGAP23Q9P227 1491 aa9.19□□□□□ -0.94
PDLIM5-219ENST00000514743 OVOS2A0A0J9YW53 1432 aa9.18□□□□□ -0.94
PDLIM5-219ENST00000514743 OVOS2Q6IE36 1432 aa9.18□□□□□ -0.94
PDLIM5-219ENST00000514743 XRN1Q8IZH2 1706 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-219ENST00000514743 MAP2K1Q02750 393 aaPredicted RBP9.18□□□□□ -0.94
PDLIM5-219ENST00000514743 PMFBP1Q8TBY8 1022 aa9.18□□□□□ -0.94
PDLIM5-219ENST00000514743 ARID4AP29374 1257 aaPredicted RBP9.18□□□□□ -0.94
PDLIM5-219ENST00000514743 LTKP29376 864 aa9.18□□□□□ -0.94
PDLIM5-219ENST00000514743 CBX1P83916 185 aa9.18□□□□□ -0.94
PDLIM5-219ENST00000514743 DZIP1LQ8IYY4 767 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-219ENST00000514743 CCDC61Q9Y6R9 512 aa9.18□□□□□ -0.94
PDLIM5-219ENST00000514743 SATB1Q01826 763 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms