RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 IFFO2Q5TF58 517 aa8.62□□□□□ -1.03
RFC1-216ENST00000514572 CCDC125Q86Z20 511 aa8.62□□□□□ -1.03
RFC1-216ENST00000514572 SLC10A4Q96EP9 437 aa8.62□□□□□ -1.03
RFC1-216ENST00000514572 IGSF5Q9NSI5 407 aa8.62□□□□□ -1.03
RFC1-216ENST00000514572 PRMT3O60678 531 aa8.61□□□□□ -1.03
RFC1-216ENST00000514572 LINC01559Q495D7 138 aa8.61□□□□□ -1.03
RFC1-216ENST00000514572 TPCN2Q8NHX9 752 aa8.61□□□□□ -1.03
RFC1-216ENST00000514572 SFI1A8K8P3 1242 aa8.6□□□□□ -1.03
RFC1-216ENST00000514572 M0R2N6 131 aa8.6□□□□□ -1.03
RFC1-216ENST00000514572 CDV3Q9UKY7 258 aaKnown RBP8.6□□□□□ -1.03
RFC1-216ENST00000514572 FCF1Q9Y324 198 aaKnown RBP8.6□□□□□ -1.03
RFC1-216ENST00000514572 S1PR4O95977 384 aa8.59□□□□□ -1.03
RFC1-216ENST00000514572 WEE1P30291 646 aa8.59□□□□□ -1.03
RFC1-216ENST00000514572 ECM1Q16610 540 aa8.59□□□□□ -1.03
RFC1-216ENST00000514572 SIRT1Q96EB6 747 aa8.59□□□□□ -1.03
RFC1-216ENST00000514572 SH3BP2P78314 561 aa8.58□□□□□ -1.04
RFC1-216ENST00000514572 USP4Q13107 963 aa8.58□□□□□ -1.04
RFC1-216ENST00000514572 NPAS4Q8IUM7 802 aa8.58□□□□□ -1.04
RFC1-216ENST00000514572 NKX2-3Q8TAU0 364 aa8.58□□□□□ -1.04
RFC1-216ENST00000514572 PRIMPOLQ96LW4 560 aa8.58□□□□□ -1.04
RFC1-216ENST00000514572 PCDHB11Q9Y5F2 797 aa8.58□□□□□ -1.04
RFC1-216ENST00000514572 ICMTO60725 284 aa8.57□□□□□ -1.04
RFC1-216ENST00000514572 MARSP56192 900 aaKnown RBP8.57□□□□□ -1.04
RFC1-216ENST00000514572 KIAA1522Q9P206 1035 aaPredicted RBP8.57□□□□□ -1.04
RFC1-216ENST00000514572 ITGBL1O95965 494 aaPredicted RBP8.56□□□□□ -1.04
RFC1-216ENST00000514572 ZNF16P17020 682 aaPredicted RBP8.56□□□□□ -1.04
RFC1-216ENST00000514572 AGERQ15109 404 aa8.56□□□□□ -1.04
RFC1-216ENST00000514572 MAP4K5Q9Y4K4 846 aa8.56□□□□□ -1.04
RFC1-216ENST00000514572 A0A0G2JS52 829 aa8.55□□□□□ -1.04
RFC1-216ENST00000514572 SCTRP47872 440 aa8.54□□□□□ -1.04
RFC1-216ENST00000514572 ZNF211Q13398 564 aaPredicted RBP8.54□□□□□ -1.04
RFC1-216ENST00000514572 FKBP5Q13451 457 aaPredicted RBP8.54□□□□□ -1.04
RFC1-216ENST00000514572 TSEN2Q8NCE0 465 aaKnown RBP8.54□□□□□ -1.04
RFC1-216ENST00000514572 COL26A1Q96A83 441 aa8.54□□□□□ -1.04
RFC1-216ENST00000514572 KCTD15Q96SI1 283 aaPredicted RBP8.54□□□□□ -1.04
RFC1-216ENST00000514572 SEPT3Q9UH03 358 aa8.54□□□□□ -1.04
RFC1-216ENST00000514572 RBM19Q9Y4C8 960 aaKnown RBP8.54□□□□□ -1.04
RFC1-216ENST00000514572 H3BRB1 525 aa8.53□□□□□ -1.04
RFC1-216ENST00000514572 WASLO00401 505 aaPredicted RBP8.53□□□□□ -1.04
RFC1-216ENST00000514572 C21orf2O43822 256 aa8.53□□□□□ -1.04
RFC1-216ENST00000514572 IGSF3O75054 1194 aa8.53□□□□□ -1.04
RFC1-216ENST00000514572 ARHGAP4P98171 946 aa8.53□□□□□ -1.04
RFC1-216ENST00000514572 PSME1Q06323 249 aa8.53□□□□□ -1.04
RFC1-216ENST00000514572 INTS6LQ5JSJ4 861 aaKnown RBP8.53□□□□□ -1.04
RFC1-216ENST00000514572 PURBQ96QR8 312 aaKnown RBP8.53□□□□□ -1.04
RFC1-216ENST00000514572 TUT1Q9H6E5 874 aaKnown RBP8.53□□□□□ -1.04
RFC1-216ENST00000514572 DNMT3AQ9Y6K1 912 aaPredicted RBP8.53□□□□□ -1.04
RFC1-216ENST00000514572 ANKRD33BA6NCL7 494 aa8.52□□□□□ -1.05
RFC1-216ENST00000514572 TMEM229AB2RXF0 380 aa8.52□□□□□ -1.05
RFC1-216ENST00000514572 ERVK-9P63128 1117 aa8.52□□□□□ -1.05
RFC1-216ENST00000514572 GTF3C2Q8WUA4 911 aaPredicted RBP8.52□□□□□ -1.05
RFC1-216ENST00000514572 ZNF358Q9NW07 568 aa8.52□□□□□ -1.05
RFC1-216ENST00000514572 BIN2Q9UBW5 565 aaPredicted RBP8.52□□□□□ -1.05
RFC1-216ENST00000514572 SCNN1DP51172 638 aa8.51□□□□□ -1.05
RFC1-216ENST00000514572 EPHA4P54764 986 aa8.51□□□□□ -1.05
RFC1-216ENST00000514572 SKOR1P84550 965 aa8.51□□□□□ -1.05
RFC1-216ENST00000514572 KCNC4Q03721 635 aa8.51□□□□□ -1.05
RFC1-216ENST00000514572 CAPN12Q6ZSI9 719 aa8.51□□□□□ -1.05
RFC1-216ENST00000514572 FBXO33Q7Z6M2 555 aa8.51□□□□□ -1.05
RFC1-216ENST00000514572 BCL2L13Q9BXK5 485 aa8.51□□□□□ -1.05
RFC1-216ENST00000514572 ERVH48-1M5A8F1 160 aa8.5□□□□□ -1.05
RFC1-216ENST00000514572 PTCD1O75127 700 aaKnown RBP8.5□□□□□ -1.05
RFC1-216ENST00000514572 LGR5O75473 907 aa8.5□□□□□ -1.05
RFC1-216ENST00000514572 ABL1P00519 1130 aa8.5□□□□□ -1.05
RFC1-216ENST00000514572 IGFBP4P22692 258 aa8.5□□□□□ -1.05
RFC1-216ENST00000514572 VARSP26640 1264 aaKnown RBP8.5□□□□□ -1.05
RFC1-216ENST00000514572 WNT7BP56706 349 aa8.5□□□□□ -1.05
RFC1-216ENST00000514572 TRIM32Q13049 653 aa8.5□□□□□ -1.05
RFC1-216ENST00000514572 SF3B2Q13435 895 aaKnown RBP8.5□□□□□ -1.05
RFC1-216ENST00000514572 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.5□□□□□ -1.05
RFC1-216ENST00000514572 MRRFQ96E11 262 aaKnown RBP8.5□□□□□ -1.05
RFC1-216ENST00000514572 RGS20O76081 388 aa8.49□□□□□ -1.05
RFC1-216ENST00000514572 MYCP01106 439 aaPredicted RBP8.49□□□□□ -1.05
RFC1-216ENST00000514572 NPR3P17342 541 aa8.49□□□□□ -1.05
RFC1-216ENST00000514572 PLA2G2CQ5R387 149 aa8.49□□□□□ -1.05
RFC1-216ENST00000514572 GLYCTKQ8IVS8 523 aa8.49□□□□□ -1.05
RFC1-216ENST00000514572 ASB16Q96NS5 453 aa8.49□□□□□ -1.05
RFC1-216ENST00000514572 HINFPQ9BQA5 517 aa8.49□□□□□ -1.05
RFC1-216ENST00000514572 OSBPL3Q9H4L5 887 aa8.49□□□□□ -1.05
RFC1-216ENST00000514572 ANO2Q9NQ90 1003 aa8.49□□□□□ -1.05
RFC1-216ENST00000514572 FOXO3O43524 673 aa8.48□□□□□ -1.05
RFC1-216ENST00000514572 FKBP4Q02790 459 aaKnown RBP eCLIP8.48□□□□□ -1.05
RFC1-216ENST00000514572 HELQQ8TDG4 1101 aa8.48□□□□□ -1.05
RFC1-216ENST00000514572 GIPC2Q8TF65 315 aa8.48□□□□□ -1.05
RFC1-216ENST00000514572 CDK15Q96Q40 435 aa8.48□□□□□ -1.05
RFC1-216ENST00000514572 MKNK1Q9BUB5 465 aa8.48□□□□□ -1.05
RFC1-216ENST00000514572 RNF223E7ERA6 249 aa8.47□□□□□ -1.05
RFC1-216ENST00000514572 VAMP1P23763 118 aa8.47□□□□□ -1.05
RFC1-216ENST00000514572 CC2D2BQ6DHV5 1058 aa8.47□□□□□ -1.05
RFC1-216ENST00000514572 ANKLE1Q8NAG6 615 aa8.47□□□□□ -1.05
RFC1-216ENST00000514572 DCTN4Q9UJW0 460 aa8.47□□□□□ -1.05
RFC1-216ENST00000514572 PPEF1O14829 653 aaPredicted RBP8.46□□□□□ -1.06
RFC1-216ENST00000514572 MTMR3Q13615 1198 aa8.46□□□□□ -1.06
RFC1-216ENST00000514572 COL19A1Q14993 1142 aa8.46□□□□□ -1.06
RFC1-216ENST00000514572 VASH1Q7L8A9 365 aaPredicted RBP8.46□□□□□ -1.06
RFC1-216ENST00000514572 RAB15P59190 212 aa8.45□□□□□ -1.06
RFC1-216ENST00000514572 MPNDQ8N594 471 aa8.45□□□□□ -1.06
RFC1-216ENST00000514572 SLC4A9Q96Q91 983 aa8.45□□□□□ -1.06
RFC1-216ENST00000514572 STAU1O95793 577 aaKnown RBP8.44□□□□□ -1.06
RFC1-216ENST00000514572 MAPK1P28482 360 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms