RNA–Protein interactions for RNA: ENST00000514478.1

COPG1-209, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 3

Gene COPG1, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-209ENST00000514478 USHBP1Q8N6Y0 703 aa11.58□□□□□ -0.56
COPG1-209ENST00000514478 MYH16Q9H6N6 1097 aa11.58□□□□□ -0.56
COPG1-209ENST00000514478 RCAN3Q9UKA8 241 aa11.58□□□□□ -0.56
COPG1-209ENST00000514478 CCDC9Q9Y3X0 531 aaKnown RBP11.58□□□□□ -0.56
COPG1-209ENST00000514478 KIAA0232Q92628 1395 aa11.57□□□□□ -0.56
COPG1-209ENST00000514478 A0A0G2JS52 829 aa11.57□□□□□ -0.56
COPG1-209ENST00000514478 CSB-PGBD3P0DP91 1061 aa11.57□□□□□ -0.56
COPG1-209ENST00000514478 CALD1Q05682 793 aaKnown RBP11.57□□□□□ -0.56
COPG1-209ENST00000514478 CHRNA2Q15822 529 aa11.57□□□□□ -0.56
COPG1-209ENST00000514478 DUSP27Q5VZP5 1158 aa11.57□□□□□ -0.56
COPG1-209ENST00000514478 TRIM35Q9UPQ4 493 aa11.57□□□□□ -0.56
COPG1-209ENST00000514478 KDRP35968 1356 aa11.56□□□□□ -0.56
COPG1-209ENST00000514478 PLCH1Q4KWH8 1693 aa11.56□□□□□ -0.56
COPG1-209ENST00000514478 LMO7Q8WWI1 1683 aa11.56□□□□□ -0.56
COPG1-209ENST00000514478 EP400Q96L91 3159 aa11.56□□□□□ -0.56
COPG1-209ENST00000514478 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
COPG1-209ENST00000514478 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
COPG1-209ENST00000514478 SPINK5Q9NQ38 1064 aaPredicted RBP11.56□□□□□ -0.56
COPG1-209ENST00000514478 PRDM11Q9NQV5 511 aa11.56□□□□□ -0.56
COPG1-209ENST00000514478 LAS1LQ9Y4W2 734 aaKnown RBP11.56□□□□□ -0.56
COPG1-209ENST00000514478 COL14A1Q05707 1796 aaKnown RBP11.56□□□□□ -0.56
COPG1-209ENST00000514478 CPDO75976 1380 aa11.55□□□□□ -0.56
COPG1-209ENST00000514478 PARP4Q9UKK3 1724 aaKnown RBP11.55□□□□□ -0.56
COPG1-209ENST00000514478 NBPF6Q5VWK0 638 aa11.55□□□□□ -0.56
COPG1-209ENST00000514478 GAS2L2Q8NHY3 880 aa11.55□□□□□ -0.56
COPG1-209ENST00000514478 NBPF4Q96M43 638 aa11.55□□□□□ -0.56
COPG1-209ENST00000514478 TRMT2AQ8IZ69 625 aaKnown RBP11.54□□□□□ -0.56
COPG1-209ENST00000514478 RTF1Q92541 710 aaKnown RBP11.54□□□□□ -0.56
COPG1-209ENST00000514478 NLRP2Q9NX02 1062 aa11.54□□□□□ -0.56
COPG1-209ENST00000514478 AXIN2Q9Y2T1 843 aa11.54□□□□□ -0.56
COPG1-209ENST00000514478 BCL9LQ86UU0 1499 aa11.54□□□□□ -0.56
COPG1-209ENST00000514478 IL16Q14005 1332 aa11.54□□□□□ -0.56
COPG1-209ENST00000514478 MTHFSDQ2M296 383 aaKnown RBP11.53□□□□□ -0.56
COPG1-209ENST00000514478 ERBB3P21860 1342 aa11.53□□□□□ -0.56
COPG1-209ENST00000514478 FAM83GA6ND36 823 aa11.52□□□□□ -0.57
COPG1-209ENST00000514478 GNAI1P63096 354 aa11.52□□□□□ -0.57
COPG1-209ENST00000514478 PLEKHO1Q53GL0 409 aaPredicted RBP11.52□□□□□ -0.57
COPG1-209ENST00000514478 KRT27Q7Z3Y8 459 aa11.52□□□□□ -0.57
COPG1-209ENST00000514478 TSR2Q969E8 191 aaKnown RBP11.52□□□□□ -0.57
COPG1-209ENST00000514478 THUMPD2Q9BTF0 503 aaKnown RBP11.52□□□□□ -0.57
COPG1-209ENST00000514478 SLIT2O94813 1529 aa11.51□□□□□ -0.57
COPG1-209ENST00000514478 GLI3P10071 1580 aa11.51□□□□□ -0.57
COPG1-209ENST00000514478 LRRC37A3O60309 1634 aa11.51□□□□□ -0.57
COPG1-209ENST00000514478 RRP1P56182 461 aaKnown RBP11.51□□□□□ -0.57
COPG1-209ENST00000514478 EVA1CP58658 441 aa11.51□□□□□ -0.57
COPG1-209ENST00000514478 DCTN1Q14203 1278 aa11.51□□□□□ -0.57
COPG1-209ENST00000514478 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.51□□□□□ -0.57
COPG1-209ENST00000514478 FANCIQ9NVI1 1328 aa11.51□□□□□ -0.57
COPG1-209ENST00000514478 SCN11AQ9UI33 1791 aa11.51□□□□□ -0.57
COPG1-209ENST00000514478 PKD1L3Q7Z443 1732 aa11.5□□□□□ -0.57
COPG1-209ENST00000514478 GNAT3A8MTJ3 354 aa11.5□□□□□ -0.57
COPG1-209ENST00000514478 TATP17735 454 aaPredicted RBP11.5□□□□□ -0.57
COPG1-209ENST00000514478 VPS72Q15906 364 aa11.5□□□□□ -0.57
COPG1-209ENST00000514478 MCM10Q7L590 875 aa11.5□□□□□ -0.57
COPG1-209ENST00000514478 SEPT12Q8IYM1 358 aa11.5□□□□□ -0.57
COPG1-209ENST00000514478 RAPGEF4Q8WZA2 1011 aa11.5□□□□□ -0.57
COPG1-209ENST00000514478 STRN4Q9NRL3 753 aa11.5□□□□□ -0.57
COPG1-209ENST00000514478 IFT57Q9NWB7 429 aa11.5□□□□□ -0.57
COPG1-209ENST00000514478 WNK3Q9BYP7 1800 aa11.5□□□□□ -0.57
COPG1-209ENST00000514478 MAP3K5Q99683 1374 aa11.5□□□□□ -0.57
COPG1-209ENST00000514478 NCAPD2Q15021 1401 aa11.5□□□□□ -0.57
COPG1-209ENST00000514478 CANXP27824 592 aaKnown RBP11.49□□□□□ -0.57
COPG1-209ENST00000514478 EXOSC9Q06265 439 aaKnown RBP11.49□□□□□ -0.57
COPG1-209ENST00000514478 AMOTQ4VCS5 1084 aa11.49□□□□□ -0.57
COPG1-209ENST00000514478 C1orf141Q5JVX7 400 aa11.49□□□□□ -0.57
COPG1-209ENST00000514478 ZNF530Q6P9A1 599 aaPredicted RBP11.49□□□□□ -0.57
COPG1-209ENST00000514478 TOM1L2Q6ZVM7 507 aa11.49□□□□□ -0.57
COPG1-209ENST00000514478 COL5A2P05997 1499 aaPredicted RBP11.49□□□□□ -0.57
COPG1-209ENST00000514478 HTATSF1O43719 755 aaKnown RBP11.48□□□□□ -0.57
COPG1-209ENST00000514478 RNF123Q5XPI4 1314 aa11.48□□□□□ -0.57
COPG1-209ENST00000514478 SIPA1L3O60292 1781 aaPredicted RBP11.47□□□□□ -0.57
COPG1-209ENST00000514478 NRAPQ86VF7 1730 aa11.47□□□□□ -0.57
COPG1-209ENST00000514478 WDR17Q8IZU2 1322 aa11.47□□□□□ -0.57
COPG1-209ENST00000514478 CFAP44Q96MT7 982 aa11.47□□□□□ -0.57
COPG1-209ENST00000514478 SRCAPQ6ZRS2 3230 aa11.47□□□□□ -0.57
COPG1-209ENST00000514478 CACNA1FO60840 1977 aa11.47□□□□□ -0.57
COPG1-209ENST00000514478 KDM3BQ7LBC6 1761 aa11.46□□□□□ -0.57
COPG1-209ENST00000514478 PLIN1O60240 522 aa11.46□□□□□ -0.57
COPG1-209ENST00000514478 CT47B1P0C2W7 299 aaPredicted RBP11.46□□□□□ -0.57
COPG1-209ENST00000514478 AKAP4Q5JQC9 854 aa11.46□□□□□ -0.57
COPG1-209ENST00000514478 ERICH6BQ5W0A0 696 aa11.46□□□□□ -0.57
COPG1-209ENST00000514478 MBIPQ9NS73 344 aa11.46□□□□□ -0.57
COPG1-209ENST00000514478 SPG7Q9UQ90 795 aa11.46□□□□□ -0.57
COPG1-209ENST00000514478 DEFB132Q7Z7B7 95 aa11.45□□□□□ -0.58
COPG1-209ENST00000514478 BTG4Q9NY30 223 aa11.45□□□□□ -0.58
COPG1-209ENST00000514478 TSPYL4Q9UJ04 414 aa11.45□□□□□ -0.58
COPG1-209ENST00000514478 SHANK3Q9BYB0 1731 aa11.45□□□□□ -0.58
COPG1-209ENST00000514478 KAT6BQ8WYB5 2073 aa11.45□□□□□ -0.58
COPG1-209ENST00000514478 MEGF6O75095 1541 aa11.45□□□□□ -0.58
COPG1-209ENST00000514478 CRB1P82279 1406 aa11.44□□□□□ -0.58
COPG1-209ENST00000514478 ONECUT3O60422 494 aaPredicted RBP11.44□□□□□ -0.58
COPG1-209ENST00000514478 BCAR3O75815 825 aa11.44□□□□□ -0.58
COPG1-209ENST00000514478 ZNF853P0CG23 659 aa11.44□□□□□ -0.58
COPG1-209ENST00000514478 FRAT1Q92837 279 aaPredicted RBP11.44□□□□□ -0.58
COPG1-209ENST00000514478 RARSP54136 660 aaKnown RBP11.43□□□□□ -0.58
COPG1-209ENST00000514478 TEFQ10587 303 aa11.43□□□□□ -0.58
COPG1-209ENST00000514478 NBPF14Q5TI25 921 aa11.43□□□□□ -0.58
COPG1-209ENST00000514478 LARP1Q6PKG0 1096 aaKnown RBP11.43□□□□□ -0.58
COPG1-209ENST00000514478 CARD10Q9BWT7 1032 aa11.43□□□□□ -0.58
COPG1-209ENST00000514478 BCL2L13Q9BXK5 485 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms