RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 FSTL1Q12841 308 aa4.89□□□□□ -1.63
CHD1-211ENST00000514344 SLC27A3Q5K4L6 730 aa4.89□□□□□ -1.63
CHD1-211ENST00000514344 PDE4DIPQ5VU43 2346 aa4.89□□□□□ -1.63
CHD1-211ENST00000514344 RRAGCQ9HB90 399 aa4.89□□□□□ -1.63
CHD1-211ENST00000514344 BCS1LQ9Y276 419 aa4.89□□□□□ -1.63
CHD1-211ENST00000514344 QSER1Q2KHR3 1735 aa4.88□□□□□ -1.63
CHD1-211ENST00000514344 FOXN1O15353 648 aa4.88□□□□□ -1.63
CHD1-211ENST00000514344 FXR2P51116 673 aaKnown RBP eCLIP4.88□□□□□ -1.638e-7■■■■■ 29.8
CHD1-211ENST00000514344 ITSN1Q15811 1721 aa4.88□□□□□ -1.63
CHD1-211ENST00000514344 SPATA31E1Q6ZUB1 1445 aa4.88□□□□□ -1.63
CHD1-211ENST00000514344 ARHGAP27Q6ZUM4 889 aa4.88□□□□□ -1.63
CHD1-211ENST00000514344 CARD10Q9BWT7 1032 aa4.88□□□□□ -1.63
CHD1-211ENST00000514344 RGPD5Q99666 1765 aa4.88□□□□□ -1.63
CHD1-211ENST00000514344 DDX54Q8TDD1 881 aaKnown RBP4.88□□□□□ -1.63
CHD1-211ENST00000514344 MKRN1Q9UHC7 482 aaKnown RBP4.88□□□□□ -1.63
CHD1-211ENST00000514344 CCNL1Q9UK58 526 aaPredicted RBP4.88□□□□□ -1.63
CHD1-211ENST00000514344 KCPQ6ZWJ8 1503 aa4.88□□□□□ -1.63
CHD1-211ENST00000514344 CCDC85CA6NKD9 419 aa4.87□□□□□ -1.63
CHD1-211ENST00000514344 CFAP44Q96MT7 982 aa4.87□□□□□ -1.63
CHD1-211ENST00000514344 MKI67P46013 3256 aaKnown RBP4.87□□□□□ -1.63
CHD1-211ENST00000514344 PPARGC1BQ86YN6 1023 aaKnown RBP4.87□□□□□ -1.63
CHD1-211ENST00000514344 SMC1BQ8NDV3 1235 aa4.87□□□□□ -1.63
CHD1-211ENST00000514344 ABHD8Q96I13 439 aa4.87□□□□□ -1.63
CHD1-211ENST00000514344 CDK19Q9BWU1 502 aa4.87□□□□□ -1.63
CHD1-211ENST00000514344 CCDC61Q9Y6R9 512 aa4.87□□□□□ -1.63
CHD1-211ENST00000514344 POLR3AO14802 1390 aaPredicted RBP4.87□□□□□ -1.63
CHD1-211ENST00000514344 PPIP5K1Q6PFW1 1433 aa4.87□□□□□ -1.63
CHD1-211ENST00000514344 PHF14O94880 888 aa4.86□□□□□ -1.63
CHD1-211ENST00000514344 C9orf131Q5VYM1 1079 aa4.86□□□□□ -1.63
CHD1-211ENST00000514344 NLRP2Q9NX02 1062 aa4.86□□□□□ -1.63
CHD1-211ENST00000514344 PRIM1P49642 420 aaKnown RBP4.86□□□□□ -1.63
CHD1-211ENST00000514344 KDM2BQ8NHM5 1336 aa4.86□□□□□ -1.63
CHD1-211ENST00000514344 LBX1P52954 281 aa4.86□□□□□ -1.63
CHD1-211ENST00000514344 TRPM1Q7Z4N2 1603 aa4.85□□□□□ -1.63
CHD1-211ENST00000514344 COL18A1P39060 1754 aa4.85□□□□□ -1.63
CHD1-211ENST00000514344 A0A0G2JLW4 131 aa4.85□□□□□ -1.63
CHD1-211ENST00000514344 IL2RBP14784 551 aa4.85□□□□□ -1.63
CHD1-211ENST00000514344 PIK3C2AO00443 1686 aa4.85□□□□□ -1.63
CHD1-211ENST00000514344 CPSF1Q10570 1443 aaKnown RBP4.85□□□□□ -1.63
CHD1-211ENST00000514344 CCDC7Q96M83 1385 aa4.85□□□□□ -1.63
CHD1-211ENST00000514344 ABCC6O95255 1503 aa4.85□□□□□ -1.63
CHD1-211ENST00000514344 AMIGO3Q86WK7 504 aa4.85□□□□□ -1.63
CHD1-211ENST00000514344 RNF181Q9P0P0 153 aa4.85□□□□□ -1.63
CHD1-211ENST00000514344 SZT2Q5T011 3432 aa4.85□□□□□ -1.63
CHD1-211ENST00000514344 FCHSD2O94868 740 aa4.84□□□□□ -1.63
CHD1-211ENST00000514344 ARHGEF25Q86VW2 580 aa4.84□□□□□ -1.63
CHD1-211ENST00000514344 PRDM10Q9NQV6 1147 aa4.84□□□□□ -1.63
CHD1-211ENST00000514344 KDM2AQ9Y2K7 1162 aa4.84□□□□□ -1.63
CHD1-211ENST00000514344 ERBB3P21860 1342 aa4.84□□□□□ -1.63
CHD1-211ENST00000514344 ADGRB1O14514 1584 aa4.84□□□□□ -1.63
CHD1-211ENST00000514344 N4BP2Q86UW6 1770 aaPredicted RBP4.84□□□□□ -1.63
CHD1-211ENST00000514344 PLEKHG3A1L390 1219 aa4.84□□□□□ -1.63
CHD1-211ENST00000514344 POTEMA6NI47 508 aa4.84□□□□□ -1.63
CHD1-211ENST00000514344 SRPK2P78362 688 aaKnown RBP4.84□□□□□ -1.63
CHD1-211ENST00000514344 AIDAQ96BJ3 306 aa4.84□□□□□ -1.63
CHD1-211ENST00000514344 CICQ96RK0 1608 aaPredicted RBP4.84□□□□□ -1.64
CHD1-211ENST00000514344 CTCFP49711 727 aaPredicted RBP4.83□□□□□ -1.64
CHD1-211ENST00000514344 KIAA1210Q9ULL0 1709 aa4.83□□□□□ -1.64
CHD1-211ENST00000514344 USP47Q96K76 1375 aa4.83□□□□□ -1.64
CHD1-211ENST00000514344 GABBR2O75899 941 aa4.83□□□□□ -1.64
CHD1-211ENST00000514344 LY75O60449 1722 aa4.83□□□□□ -1.64
CHD1-211ENST00000514344 PXDNLA1KZ92 1463 aa4.83□□□□□ -1.64
CHD1-211ENST00000514344 SLIT3O75094 1523 aa4.83□□□□□ -1.64
CHD1-211ENST00000514344 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.83□□□□□ -1.64
CHD1-211ENST00000514344 REM2Q8IYK8 340 aaPredicted RBP4.83□□□□□ -1.64
CHD1-211ENST00000514344 CABP2Q9NPB3 220 aa4.83□□□□□ -1.64
CHD1-211ENST00000514344 PLEKHG2Q9H7P9 1386 aa4.82□□□□□ -1.64
CHD1-211ENST00000514344 AK7Q96M32 723 aa4.82□□□□□ -1.64
CHD1-211ENST00000514344 DOT1LQ8TEK3 1739 aa4.82□□□□□ -1.64
CHD1-211ENST00000514344 MMP10P09238 476 aa4.82□□□□□ -1.64
CHD1-211ENST00000514344 FLAD1Q8NFF5 587 aa4.82□□□□□ -1.64
CHD1-211ENST00000514344 CABP1Q9NZU7 370 aa4.82□□□□□ -1.64
CHD1-211ENST00000514344 ANKRD36BQ8N2N9 1353 aa4.82□□□□□ -1.64
CHD1-211ENST00000514344 C5P01031 1676 aa4.82□□□□□ -1.64
CHD1-211ENST00000514344 TNRC6CQ9HCJ0 1690 aaKnown RBP4.82□□□□□ -1.64
CHD1-211ENST00000514344 PKD1L3Q7Z443 1732 aa4.81□□□□□ -1.64
CHD1-211ENST00000514344 VEGFAP15692 232 aaPredicted RBP4.81□□□□□ -1.64
CHD1-211ENST00000514344 DPEP1P16444 411 aa4.81□□□□□ -1.64
CHD1-211ENST00000514344 KCNH5Q8NCM2 988 aa4.81□□□□□ -1.64
CHD1-211ENST00000514344 NSD2O96028 1365 aa4.81□□□□□ -1.64
CHD1-211ENST00000514344 CENPFP49454 3210 aa4.81□□□□□ -1.64
CHD1-211ENST00000514344 RGS19P49795 217 aa4.81□□□□□ -1.64
CHD1-211ENST00000514344 BRCA2P51587 3418 aa4.81□□□□□ -1.64
CHD1-211ENST00000514344 LTV1Q96GA3 475 aaPredicted RBP4.8□□□□□ -1.64
CHD1-211ENST00000514344 CREBZFQ9NS37 354 aa4.8□□□□□ -1.64
CHD1-211ENST00000514344 COL6A3P12111 3177 aa4.8□□□□□ -1.64
CHD1-211ENST00000514344 VEGFBP49765 207 aa4.8□□□□□ -1.64
CHD1-211ENST00000514344 TGFB2P61812 414 aa4.8□□□□□ -1.64
CHD1-211ENST00000514344 POTEGQ6S5H5 508 aa4.8□□□□□ -1.64
CHD1-211ENST00000514344 DCAF11Q8TEB1 546 aa4.8□□□□□ -1.64
CHD1-211ENST00000514344 ANKRD24Q8TF21 1146 aa4.8□□□□□ -1.64
CHD1-211ENST00000514344 MPHOSPH9Q99550 1183 aa4.8□□□□□ -1.64
CHD1-211ENST00000514344 USP54Q70EL1 1684 aa4.8□□□□□ -1.64
CHD1-211ENST00000514344 WBP1LQ9NX94 342 aa4.8□□□□□ -1.64
CHD1-211ENST00000514344 C10orf71Q711Q0 1435 aa4.79□□□□□ -1.64
CHD1-211ENST00000514344 POTEIP0CG38 1075 aa4.79□□□□□ -1.64
CHD1-211ENST00000514344 POTEJP0CG39 1038 aa4.79□□□□□ -1.64
CHD1-211ENST00000514344 HSPA8P11142 646 aaKnown RBP4.79□□□□□ -1.64
CHD1-211ENST00000514344 RASSF7Q02833 373 aa4.79□□□□□ -1.64
CHD1-211ENST00000514344 MPRIPQ6WCQ1 1025 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms