RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-208ENST00000514232 GIGYF2Q6Y7W6 1299 aaKnown RBP6.09□□□□□ -1.43
SMARCAD1-208ENST00000514232 MOXD2PA6NHM9 499 aa6.08□□□□□ -1.44
SMARCAD1-208ENST00000514232 CFAP99D6REC4 459 aa6.08□□□□□ -1.44
SMARCAD1-208ENST00000514232 ERFEQ4G0M1 354 aa6.08□□□□□ -1.44
SMARCAD1-208ENST00000514232 PRICKLE2Q7Z3G6 844 aa6.08□□□□□ -1.44
SMARCAD1-208ENST00000514232 DYRK1BQ9Y463 629 aa6.08□□□□□ -1.44
SMARCAD1-208ENST00000514232 RNF144AP50876 292 aaPredicted RBP6.07□□□□□ -1.44
SMARCAD1-208ENST00000514232 SPIRE2Q8WWL2 714 aa6.07□□□□□ -1.44
SMARCAD1-208ENST00000514232 MAGEB6P1A0A0J9YX57 407 aa6.06□□□□□ -1.44
SMARCAD1-208ENST00000514232 ADH1AP07327 375 aa6.06□□□□□ -1.44
SMARCAD1-208ENST00000514232 THBS1P07996 1170 aa6.06□□□□□ -1.44
SMARCAD1-208ENST00000514232 PTGIRP43119 386 aa6.06□□□□□ -1.44
SMARCAD1-208ENST00000514232 DHX9Q08211 1270 aaKnown RBP6.06□□□□□ -1.44
SMARCAD1-208ENST00000514232 KRTAP5-3Q6L8H2 238 aa6.06□□□□□ -1.44
SMARCAD1-208ENST00000514232 SLCO4C1Q6ZQN7 724 aa6.06□□□□□ -1.44
SMARCAD1-208ENST00000514232 GOLGA6L1Q8N7Z2 621 aa6.06□□□□□ -1.44
SMARCAD1-208ENST00000514232 BTBD6Q96KE9 485 aa6.06□□□□□ -1.44
SMARCAD1-208ENST00000514232 CFHR5Q9BXR6 569 aa6.06□□□□□ -1.44
SMARCAD1-208ENST00000514232 AMPD1P23109 780 aa6.05□□□□□ -1.44
SMARCAD1-208ENST00000514232 KCTD15Q96SI1 283 aaPredicted RBP6.05□□□□□ -1.44
SMARCAD1-208ENST00000514232 GPCPD1Q9NPB8 672 aa6.05□□□□□ -1.44
SMARCAD1-208ENST00000514232 PER1O15534 1290 aaPredicted RBP6.04□□□□□ -1.44
SMARCAD1-208ENST00000514232 MAP2K5Q13163 448 aa6.04□□□□□ -1.44
SMARCAD1-208ENST00000514232 INTS6LQ5JSJ4 861 aaKnown RBP6.04□□□□□ -1.44
SMARCAD1-208ENST00000514232 RIC3Q7Z5B4 369 aa6.04□□□□□ -1.44
SMARCAD1-208ENST00000514232 LILRA1O75019 489 aa6.03□□□□□ -1.44
SMARCAD1-208ENST00000514232 ADD1P35611 737 aaKnown RBP6.03□□□□□ -1.44
SMARCAD1-208ENST00000514232 NBPF14Q5TI25 921 aa6.03□□□□□ -1.44
SMARCAD1-208ENST00000514232 ARMC2Q8NEN0 867 aa6.03□□□□□ -1.44
SMARCAD1-208ENST00000514232 SPATA31C1P0DKV0 1188 aa6.02□□□□□ -1.45
SMARCAD1-208ENST00000514232 EPXP11678 715 aa6.02□□□□□ -1.45
SMARCAD1-208ENST00000514232 CARD14Q9BXL6 1004 aa6.02□□□□□ -1.45
SMARCAD1-208ENST00000514232 NUCKS1Q9H1E3 243 aaKnown RBP6.02□□□□□ -1.45
SMARCAD1-208ENST00000514232 IRF6O14896 467 aa6.01□□□□□ -1.45
SMARCAD1-208ENST00000514232 TRIM11Q96F44 468 aa6.01□□□□□ -1.45
SMARCAD1-208ENST00000514232 GAS2L1Q99501 681 aaPredicted RBP6.01□□□□□ -1.45
SMARCAD1-208ENST00000514232 C2CD2LO14523 706 aa6□□□□□ -1.45
SMARCAD1-208ENST00000514232 CLCN1P35523 988 aa6□□□□□ -1.45
SMARCAD1-208ENST00000514232 LCE4AQ5TA78 99 aa6□□□□□ -1.45
SMARCAD1-208ENST00000514232 ZNF784Q8NCA9 323 aaPredicted RBP6□□□□□ -1.45
SMARCAD1-208ENST00000514232 TMPRSS4Q9NRS4 437 aa6□□□□□ -1.45
SMARCAD1-208ENST00000514232 GGA1Q9UJY5 639 aa6□□□□□ -1.45
SMARCAD1-208ENST00000514232 UBAP2LQ14157 1087 aaKnown RBP5.99□□□□□ -1.45
SMARCAD1-208ENST00000514232 SMYD5Q6GMV2 418 aa5.99□□□□□ -1.45
SMARCAD1-208ENST00000514232 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.99□□□□□ -1.45
SMARCAD1-208ENST00000514232 CDV3Q9UKY7 258 aaKnown RBP5.99□□□□□ -1.45
SMARCAD1-208ENST00000514232 GJA5P36382 358 aa5.98□□□□□ -1.45
SMARCAD1-208ENST00000514232 PAXIP1Q6ZW49 1069 aaPredicted RBP5.98□□□□□ -1.45
SMARCAD1-208ENST00000514232 CFAP44Q96MT7 982 aa5.98□□□□□ -1.45
SMARCAD1-208ENST00000514232 H2AFB1P0C5Y9 115 aa5.97□□□□□ -1.45
SMARCAD1-208ENST00000514232 H2AFB2P0C5Z0 115 aa5.97□□□□□ -1.45
SMARCAD1-208ENST00000514232 GPIHBP1Q8IV16 184 aa5.97□□□□□ -1.45
SMARCAD1-208ENST00000514232 GPC1P35052 558 aa5.96□□□□□ -1.46
SMARCAD1-208ENST00000514232 POU4F2Q12837 409 aa5.96□□□□□ -1.46
SMARCAD1-208ENST00000514232 RNF135Q8IUD6 432 aa5.96□□□□□ -1.46
SMARCAD1-208ENST00000514232 GPKOWQ92917 476 aaPredicted RBP eCLIP5.96□□□□□ -1.46
SMARCAD1-208ENST00000514232 PCDHB15Q9Y5E8 787 aa5.96□□□□□ -1.46
SMARCAD1-208ENST00000514232 F11P03951 625 aa5.95□□□□□ -1.46
SMARCAD1-208ENST00000514232 HRCP23327 699 aa5.95□□□□□ -1.46
SMARCAD1-208ENST00000514232 CHSY3Q70JA7 882 aa5.95□□□□□ -1.46
SMARCAD1-208ENST00000514232 SLC10A4Q96EP9 437 aa5.95□□□□□ -1.46
SMARCAD1-208ENST00000514232 PLVAPQ9BX97 442 aa5.95□□□□□ -1.46
SMARCAD1-208ENST00000514232 PHF24Q9UPV7 400 aa5.95□□□□□ -1.46
SMARCAD1-208ENST00000514232 NBPF10Q6P3W6 841 aaKnown RBP5.94□□□□□ -1.46
SMARCAD1-208ENST00000514232 P3H3Q8IVL6 736 aa5.94□□□□□ -1.46
SMARCAD1-208ENST00000514232 NBPF15Q8N660 670 aa5.94□□□□□ -1.46
SMARCAD1-208ENST00000514232 BMP4P12644 408 aa5.93□□□□□ -1.46
SMARCAD1-208ENST00000514232 ELNP15502 786 aa5.93□□□□□ -1.46
SMARCAD1-208ENST00000514232 JAG1P78504 1218 aa5.93□□□□□ -1.46
SMARCAD1-208ENST00000514232 WDR44Q5JSH3 913 aa5.93□□□□□ -1.46
SMARCAD1-208ENST00000514232 RSBN1LQ6PCB5 846 aaPredicted RBP5.93□□□□□ -1.46
SMARCAD1-208ENST00000514232 SPATA31C2B4DYI2 1134 aa5.92□□□□□ -1.46
SMARCAD1-208ENST00000514232 ARAFP10398 606 aa5.92□□□□□ -1.46
SMARCAD1-208ENST00000514232 CCDC102AQ96A19 550 aa5.91□□□□□ -1.46
SMARCAD1-208ENST00000514232 ZBTB3Q9H5J0 574 aa5.91□□□□□ -1.46
SMARCAD1-208ENST00000514232 NDFIP2Q9NV92 336 aa5.91□□□□□ -1.46
SMARCAD1-208ENST00000514232 MINK1Q8N4C8 1332 aaPredicted RBP5.91□□□□□ -1.46
SMARCAD1-208ENST00000514232 ERVH48-1M5A8F1 160 aa5.9□□□□□ -1.46
SMARCAD1-208ENST00000514232 SSTR3P32745 418 aaPredicted RBP5.9□□□□□ -1.46
SMARCAD1-208ENST00000514232 CTBSQ01459 385 aa5.9□□□□□ -1.46
SMARCAD1-208ENST00000514232 ARHGAP9Q9BRR9 750 aa5.9□□□□□ -1.46
SMARCAD1-208ENST00000514232 GRIP2Q9C0E4 1043 aa5.9□□□□□ -1.46
SMARCAD1-208ENST00000514232 ATXN7L1Q9ULK2 861 aaPredicted RBP5.9□□□□□ -1.46
SMARCAD1-208ENST00000514232 NEURL1BA8MQ27 555 aa5.89□□□□□ -1.47
SMARCAD1-208ENST00000514232 PDXDC2PQ6P474 469 aa5.89□□□□□ -1.47
SMARCAD1-208ENST00000514232 OCSTAMPQ9BR26 566 aa5.89□□□□□ -1.47
SMARCAD1-208ENST00000514232 TIMMDC1Q9NPL8 285 aa5.89□□□□□ -1.47
SMARCAD1-208ENST00000514232 CABLES1Q8TDN4 633 aa5.88□□□□□ -1.47
SMARCAD1-208ENST00000514232 TRIM52Q96A61 297 aa5.88□□□□□ -1.47
SMARCAD1-208ENST00000514232 KRTAP9-8Q9BYQ0 159 aa5.88□□□□□ -1.47
SMARCAD1-208ENST00000514232 RNF112Q9ULX5 631 aa5.88□□□□□ -1.47
SMARCAD1-208ENST00000514232 APBA3O96018 575 aa5.87□□□□□ -1.47
SMARCAD1-208ENST00000514232 FGFR3P22607 806 aa5.87□□□□□ -1.47
SMARCAD1-208ENST00000514232 KLF15Q9UIH9 416 aa5.87□□□□□ -1.47
SMARCAD1-208ENST00000514232 RNF114Q9Y508 228 aa5.87□□□□□ -1.47
SMARCAD1-208ENST00000514232 A0A1W2PRU2 124 aa5.86□□□□□ -1.47
SMARCAD1-208ENST00000514232 TAL1P17542 331 aaPredicted RBP5.86□□□□□ -1.47
SMARCAD1-208ENST00000514232 LBRQ14739 615 aaKnown RBP5.86□□□□□ -1.47
SMARCAD1-208ENST00000514232 FCHSD1Q86WN1 690 aa5.86□□□□□ -1.47
SMARCAD1-208ENST00000514232 ABHD17AQ96GS6 310 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 717.3 ms