RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 NFATC2IPQ8NCF5 419 aa6.37□□□□□ -1.39
SGCB-203ENST00000514133 ZNF775Q96BV0 537 aaPredicted RBP6.37□□□□□ -1.39
SGCB-203ENST00000514133 TLL2Q9Y6L7 1015 aa6.37□□□□□ -1.39
SGCB-203ENST00000514133 USP17L5A8MUK1 530 aa6.36□□□□□ -1.39
SGCB-203ENST00000514133 GRM5P41594 1212 aa6.36□□□□□ -1.39
SGCB-203ENST00000514133 MCCD1P59942 119 aaPredicted RBP6.36□□□□□ -1.39
SGCB-203ENST00000514133 DHX9Q08211 1270 aaKnown RBP6.36□□□□□ -1.39
SGCB-203ENST00000514133 ARHGAP9Q9BRR9 750 aa6.36□□□□□ -1.39
SGCB-203ENST00000514133 KLF16Q9BXK1 252 aaPredicted RBP6.36□□□□□ -1.39
SGCB-203ENST00000514133 MKRN1Q9UHC7 482 aaKnown RBP6.36□□□□□ -1.39
SGCB-203ENST00000514133 DACH1Q9UI36 760 aa6.36□□□□□ -1.39
SGCB-203ENST00000514133 EMILIN1Q9Y6C2 1016 aa6.36□□□□□ -1.39
SGCB-203ENST00000514133 POTECB2RU33 542 aa6.35□□□□□ -1.39
SGCB-203ENST00000514133 SLFNL1Q499Z3 407 aa6.35□□□□□ -1.39
SGCB-203ENST00000514133 C4orf48Q5BLP8 95 aa6.35□□□□□ -1.39
SGCB-203ENST00000514133 LARP1Q6PKG0 1096 aaKnown RBP6.35□□□□□ -1.39
SGCB-203ENST00000514133 VASH1Q7L8A9 365 aaPredicted RBP6.35□□□□□ -1.39
SGCB-203ENST00000514133 ZBTB33Q86T24 672 aa6.35□□□□□ -1.39
SGCB-203ENST00000514133 FAM196BA6NMK8 535 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 USP17L15C9J2P7 530 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 USP17L10C9JJH3 530 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 USP17L13C9JLJ4 530 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 USP17L12C9JPN9 530 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 USP17L11C9JVI0 530 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 USP17L21D6R901 530 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 USP17L18D6R9N7 530 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 USP17L22D6RA61 530 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 USP17L17D6RBQ6 530 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 USP17L19D6RCP7 530 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 USP17L20D6RJB6 530 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 UPP2O95045 317 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 TIMP2P16035 220 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 RASA1P20936 1047 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 WDR4P57081 412 aaKnown RBP6.34□□□□□ -1.39
SGCB-203ENST00000514133 USP17L24Q0WX57 530 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 ARID5BQ14865 1188 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 NBPF20Q3BBV1 942 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 ERFEQ4G0M1 354 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 CRTC2Q53ET0 693 aaPredicted RBP6.34□□□□□ -1.39
SGCB-203ENST00000514133 PHLDB3Q6NSJ2 640 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 TREML4Q6UXN2 200 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 TXNDC2Q86VQ3 553 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 PLEKHM2Q8IWE5 1019 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 FAM200AQ8TCP9 573 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 SLC10A4Q96EP9 437 aa6.34□□□□□ -1.39
SGCB-203ENST00000514133 ARID4AP29374 1257 aaPredicted RBP6.33□□□□□ -1.4
SGCB-203ENST00000514133 NCOA4Q13772 614 aa6.33□□□□□ -1.4
SGCB-203ENST00000514133 CCDC116Q8IYX3 515 aa6.33□□□□□ -1.4
SGCB-203ENST00000514133 PGPEP1Q9NXJ5 209 aa6.33□□□□□ -1.4
SGCB-203ENST00000514133 CEP126Q9P2H0 1117 aa6.33□□□□□ -1.4
SGCB-203ENST00000514133 MAGEB6P1A0A0J9YX57 407 aa6.32□□□□□ -1.4
SGCB-203ENST00000514133 ATP5J2-PTCD1G3V325 749 aa6.32□□□□□ -1.4
SGCB-203ENST00000514133 IGSF3O75054 1194 aa6.32□□□□□ -1.4
SGCB-203ENST00000514133 SSFA2P28290 1259 aa6.32□□□□□ -1.4
SGCB-203ENST00000514133 PTK7Q13308 1070 aa6.32□□□□□ -1.4
SGCB-203ENST00000514133 MRPL14Q6P1L8 145 aaKnown RBP6.32□□□□□ -1.4
SGCB-203ENST00000514133 RNF135Q8IUD6 432 aa6.32□□□□□ -1.4
SGCB-203ENST00000514133 SEPT12Q8IYM1 358 aa6.32□□□□□ -1.4
SGCB-203ENST00000514133 PCDHB9Q9Y5E1 797 aa6.32□□□□□ -1.4
SGCB-203ENST00000514133 ZIC2O95409 532 aaPredicted RBP6.31□□□□□ -1.4
SGCB-203ENST00000514133 TRIM46Q7Z4K8 759 aa6.31□□□□□ -1.4
SGCB-203ENST00000514133 PLPP7Q8NBV4 271 aa6.31□□□□□ -1.4
SGCB-203ENST00000514133 SLC16A10Q8TF71 515 aa6.31□□□□□ -1.4
SGCB-203ENST00000514133 TSEN34Q9BSV6 310 aaKnown RBP6.31□□□□□ -1.4
SGCB-203ENST00000514133 CDCA7Q9BWT1 371 aaPredicted RBP6.31□□□□□ -1.4
SGCB-203ENST00000514133 LOC105371045A0A1W2PR82 267 aa6.3□□□□□ -1.4
SGCB-203ENST00000514133 WFS1O76024 890 aa6.3□□□□□ -1.4
SGCB-203ENST00000514133 FSHRP23945 695 aa6.3□□□□□ -1.4
SGCB-203ENST00000514133 ANKMY2Q8IV38 441 aa6.3□□□□□ -1.4
SGCB-203ENST00000514133 MEIOBQ8N635 442 aa6.3□□□□□ -1.4
SGCB-203ENST00000514133 KCTD15Q96SI1 283 aaPredicted RBP6.3□□□□□ -1.4
SGCB-203ENST00000514133 SLAIN2Q9P270 581 aa6.3□□□□□ -1.4
SGCB-203ENST00000514133 UNCXA6NJT0 531 aa6.29□□□□□ -1.4
SGCB-203ENST00000514133 TERTO14746 1132 aaKnown RBP6.29□□□□□ -1.4
SGCB-203ENST00000514133 NR3C2P08235 984 aa6.29□□□□□ -1.4
SGCB-203ENST00000514133 ATP2B4P23634 1241 aa6.29□□□□□ -1.4
SGCB-203ENST00000514133 DPYDQ12882 1025 aa6.29□□□□□ -1.4
SGCB-203ENST00000514133 EML3Q32P44 896 aa6.29□□□□□ -1.4
SGCB-203ENST00000514133 OGFOD1Q8N543 542 aa6.29□□□□□ -1.4
SGCB-203ENST00000514133 ADAM32Q8TC27 787 aa6.29□□□□□ -1.4
SGCB-203ENST00000514133 CLP1Q92989 425 aaKnown RBP6.29□□□□□ -1.4
SGCB-203ENST00000514133 ITPKCQ96DU7 683 aa6.29□□□□□ -1.4
SGCB-203ENST00000514133 ZFP42Q96MM3 310 aa6.29□□□□□ -1.4
SGCB-203ENST00000514133 CARD14Q9BXL6 1004 aa6.29□□□□□ -1.4
SGCB-203ENST00000514133 NXF1Q9UBU9 619 aaKnown RBP6.29□□□□□ -1.4
SGCB-203ENST00000514133 SHROOM4Q9ULL8 1493 aa6.28□□□□□ -1.4
SGCB-203ENST00000514133 RBM47A0AV96 593 aaKnown RBP6.28□□□□□ -1.4
SGCB-203ENST00000514133 SOWAHDA6NJG2 315 aa6.28□□□□□ -1.4
SGCB-203ENST00000514133 LZTS3O60299 673 aaPredicted RBP6.28□□□□□ -1.4
SGCB-203ENST00000514133 SNRPBP14678 240 aaKnown RBP6.28□□□□□ -1.4
SGCB-203ENST00000514133 SERPINB4P48594 390 aa6.28□□□□□ -1.4
SGCB-203ENST00000514133 FAM69CQ0P6D2 419 aa6.28□□□□□ -1.4
SGCB-203ENST00000514133 LCE2AQ5TA79 106 aaPredicted RBP6.28□□□□□ -1.4
SGCB-203ENST00000514133 Q6ZVU0 165 aa6.28□□□□□ -1.4
SGCB-203ENST00000514133 PHTF2Q8N3S3 785 aa6.28□□□□□ -1.4
SGCB-203ENST00000514133 ZNF594Q96JF6 807 aaPredicted RBP6.28□□□□□ -1.4
SGCB-203ENST00000514133 BIN2Q9UBW5 565 aaPredicted RBP6.28□□□□□ -1.4
SGCB-203ENST00000514133 WIPF1O43516 503 aa6.27□□□□□ -1.41
SGCB-203ENST00000514133 SCNN1AP37088 669 aa6.27□□□□□ -1.41
SGCB-203ENST00000514133 NFX1Q12986 1120 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms