RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 FLT4P35916 1363 aa10.03□□□□□ -0.8
HTT-212ENST00000513639 USP54Q70EL1 1684 aa10.03□□□□□ -0.8
HTT-212ENST00000513639 TNS1Q9HBL0 1735 aaKnown RBP10.03□□□□□ -0.8
HTT-212ENST00000513639 RGPD5Q99666 1765 aa10.03□□□□□ -0.8
HTT-212ENST00000513639 WASHC2AQ641Q2 1341 aa10.03□□□□□ -0.8
HTT-212ENST00000513639 PANK3Q9H999 370 aa10.02□□□□□ -0.81
HTT-212ENST00000513639 PEAK1Q9H792 1746 aa10.02□□□□□ -0.81
HTT-212ENST00000513639 NSD3Q9BZ95 1437 aa10.01□□□□□ -0.81
HTT-212ENST00000513639 LRRC37A3O60309 1634 aa10.01□□□□□ -0.81
HTT-212ENST00000513639 USHBP1Q8N6Y0 703 aa10.01□□□□□ -0.81
HTT-212ENST00000513639 ANO8Q9HCE9 1232 aaPredicted RBP10.01□□□□□ -0.81
HTT-212ENST00000513639 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.01□□□□□ -0.815e-7■■■□□ 16.8
HTT-212ENST00000513639 POLKQ9UBT6 870 aa10.01□□□□□ -0.81
HTT-212ENST00000513639 SPG7Q9UQ90 795 aa10.01□□□□□ -0.81
HTT-212ENST00000513639 EMILIN1Q9Y6C2 1016 aa10.01□□□□□ -0.81
HTT-212ENST00000513639 KAT6BQ8WYB5 2073 aa10.01□□□□□ -0.81
HTT-212ENST00000513639 ZBTB7AO95365 584 aa10□□□□□ -0.81
HTT-212ENST00000513639 SLC16A10Q8TF71 515 aa10□□□□□ -0.81
HTT-212ENST00000513639 MTFR1LQ9H019 292 aa10□□□□□ -0.81
HTT-212ENST00000513639 KNSTRNQ9Y448 316 aa10□□□□□ -0.81
HTT-212ENST00000513639 LRP5O75197 1615 aa10□□□□□ -0.81
HTT-212ENST00000513639 LTN1O94822 1766 aa9.99□□□□□ -0.81
HTT-212ENST00000513639 SLC4A2P04920 1241 aa9.99□□□□□ -0.81
HTT-212ENST00000513639 TNNT2P45379 298 aaPredicted RBP9.99□□□□□ -0.81
HTT-212ENST00000513639 MORC1Q86VD1 984 aa9.99□□□□□ -0.81
HTT-212ENST00000513639 LRRC4BQ9NT99 713 aa9.99□□□□□ -0.81
HTT-212ENST00000513639 TFCP2L1Q9NZI6 479 aa9.99□□□□□ -0.81
HTT-212ENST00000513639 ATF5Q9Y2D1 282 aaPredicted RBP9.99□□□□□ -0.81
HTT-212ENST00000513639 PCDH11XQ9BZA7 1347 aa9.99□□□□□ -0.81
HTT-212ENST00000513639 PCDH11YQ9BZA8 1340 aa9.99□□□□□ -0.81
HTT-212ENST00000513639 SMARCC1Q92922 1105 aaPredicted RBP9.98□□□□□ -0.81
HTT-212ENST00000513639 EYA1Q99502 592 aa9.98□□□□□ -0.81
HTT-212ENST00000513639 SBF2Q86WG5 1849 aa9.98□□□□□ -0.81
HTT-212ENST00000513639 NKX1-1Q15270 411 aaPredicted RBP9.97□□□□□ -0.81
HTT-212ENST00000513639 MPRIPQ6WCQ1 1025 aa9.97□□□□□ -0.81
HTT-212ENST00000513639 AKT1S1Q96B36 256 aa9.97□□□□□ -0.81
HTT-212ENST00000513639 PDGFDQ9GZP0 370 aaPredicted RBP9.97□□□□□ -0.81
HTT-212ENST00000513639 CCNL1Q9UK58 526 aaPredicted RBP9.97□□□□□ -0.81
HTT-212ENST00000513639 RREB1Q92766 1687 aa9.96□□□□□ -0.81
HTT-212ENST00000513639 CYP27B1O15528 508 aa9.96□□□□□ -0.82
HTT-212ENST00000513639 PTGER2P43116 358 aa9.96□□□□□ -0.82
HTT-212ENST00000513639 IFNL2Q8IZJ0 200 aa9.96□□□□□ -0.82
HTT-212ENST00000513639 FLAD1Q8NFF5 587 aa9.96□□□□□ -0.82
HTT-212ENST00000513639 NSD2O96028 1365 aa9.96□□□□□ -0.82
HTT-212ENST00000513639 RGPD3A6NKT7 1758 aaPredicted RBP9.96□□□□□ -0.82
HTT-212ENST00000513639 RGPD4Q7Z3J3 1758 aa9.96□□□□□ -0.82
HTT-212ENST00000513639 POLD1P28340 1107 aa9.95□□□□□ -0.82
HTT-212ENST00000513639 EIF4A2Q14240 407 aaKnown RBP9.95□□□□□ -0.82
HTT-212ENST00000513639 PLEKHO1Q53GL0 409 aaPredicted RBP9.95□□□□□ -0.82
HTT-212ENST00000513639 ARXQ96QS3 562 aa9.95□□□□□ -0.82
HTT-212ENST00000513639 FAM208AQ9UK61 1670 aaKnown RBP9.95□□□□□ -0.82
HTT-212ENST00000513639 NUP188Q5SRE5 1749 aa9.95□□□□□ -0.82
HTT-212ENST00000513639 MEGF6O75095 1541 aa9.94□□□□□ -0.82
HTT-212ENST00000513639 HSP90AB1P08238 724 aaKnown RBP9.94□□□□□ -0.82
HTT-212ENST00000513639 ZNF827Q17R98 1081 aa9.94□□□□□ -0.82
HTT-212ENST00000513639 AMOTQ4VCS5 1084 aa9.94□□□□□ -0.82
HTT-212ENST00000513639 SYT17Q9BSW7 474 aa9.94□□□□□ -0.82
HTT-212ENST00000513639 WNK3Q9BYP7 1800 aa9.93□□□□□ -0.82
HTT-212ENST00000513639 KCNQ4P56696 695 aa9.93□□□□□ -0.82
HTT-212ENST00000513639 PIGBQ92521 554 aa9.93□□□□□ -0.82
HTT-212ENST00000513639 SGIP1Q9BQI5 828 aa9.93□□□□□ -0.82
HTT-212ENST00000513639 TMOD3Q9NYL9 352 aa9.93□□□□□ -0.82
HTT-212ENST00000513639 PLEKHG2Q9H7P9 1386 aa9.92□□□□□ -0.82
HTT-212ENST00000513639 ERVV-2B6SEH9 535 aa9.92□□□□□ -0.82
HTT-212ENST00000513639 MYCNP04198 464 aaPredicted RBP9.92□□□□□ -0.82
HTT-212ENST00000513639 PHKG2P15735 406 aa9.92□□□□□ -0.82
HTT-212ENST00000513639 FHDC1Q9C0D6 1143 aaPredicted RBP9.92□□□□□ -0.82
HTT-212ENST00000513639 NHSQ6T4R5 1651 aa9.92□□□□□ -0.82
HTT-212ENST00000513639 KIF7Q2M1P5 1343 aa9.91□□□□□ -0.82
HTT-212ENST00000513639 AMER1Q5JTC6 1135 aaPredicted RBP9.91□□□□□ -0.82
HTT-212ENST00000513639 DCAF5Q96JK2 942 aa9.91□□□□□ -0.82
HTT-212ENST00000513639 PNPLA7Q6ZV29 1317 aa9.9□□□□□ -0.82
HTT-212ENST00000513639 IGSF1Q8N6C5 1336 aa9.9□□□□□ -0.82
HTT-212ENST00000513639 PER1O15534 1290 aaPredicted RBP9.9□□□□□ -0.82
HTT-212ENST00000513639 YY1P25490 414 aa9.9□□□□□ -0.82
HTT-212ENST00000513639 C1orf141Q5JVX7 400 aa9.9□□□□□ -0.82
HTT-212ENST00000513639 NCAPD2Q15021 1401 aa9.9□□□□□ -0.83
HTT-212ENST00000513639 PALLDQ8WX93 1383 aa9.89□□□□□ -0.83
HTT-212ENST00000513639 LOC102724428A0A0B4J2F2 783 aa9.89□□□□□ -0.83
HTT-212ENST00000513639 MTHFSP49914 203 aa9.89□□□□□ -0.83
HTT-212ENST00000513639 SIK1P57059 783 aa9.89□□□□□ -0.83
HTT-212ENST00000513639 SULT6B1Q6IMI4 303 aa9.89□□□□□ -0.83
HTT-212ENST00000513639 COL23A1Q86Y22 540 aaPredicted RBP9.89□□□□□ -0.83
HTT-212ENST00000513639 AK7Q96M32 723 aa9.89□□□□□ -0.83
HTT-212ENST00000513639 BTAF1O14981 1849 aa9.89□□□□□ -0.83
HTT-212ENST00000513639 KIF20BQ96Q89 1820 aa9.89□□□□□ -0.83
HTT-212ENST00000513639 UTRNP46939 3433 aa9.88□□□□□ -0.83
HTT-212ENST00000513639 IL13P35225 146 aa9.88□□□□□ -0.83
HTT-212ENST00000513639 ATP6V1AP38606 617 aa9.88□□□□□ -0.83
HTT-212ENST00000513639 CABP4P57796 275 aa9.88□□□□□ -0.83
HTT-212ENST00000513639 ZNF530Q6P9A1 599 aaPredicted RBP9.88□□□□□ -0.83
HTT-212ENST00000513639 ASAP1Q9ULH1 1129 aa9.88□□□□□ -0.83
HTT-212ENST00000513639 MAP3K5Q99683 1374 aa9.88□□□□□ -0.83
HTT-212ENST00000513639 MYOM1P52179 1685 aa9.87□□□□□ -0.83
HTT-212ENST00000513639 MAP2P11137 1827 aaKnown RBP9.87□□□□□ -0.83
HTT-212ENST00000513639 GPR162Q16538 588 aa9.87□□□□□ -0.83
HTT-212ENST00000513639 ATG3Q9NT62 314 aa9.87□□□□□ -0.83
HTT-212ENST00000513639 RGPD2P0DJD1 1756 aa9.86□□□□□ -0.83
HTT-212ENST00000513639 DIAPH1O60610 1272 aaKnown RBP9.86□□□□□ -0.83
HTT-212ENST00000513639 SSFA2P28290 1259 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms