RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 TOM1L2Q6ZVM7 507 aa13.82□□□□□ -0.2
CCL28-203ENST00000513525 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCL28-203ENST00000513525 TRIM37O94972 964 aa13.81□□□□□ -0.2
CCL28-203ENST00000513525 POTEGQ6S5H5 508 aa13.81□□□□□ -0.2
CCL28-203ENST00000513525 USP47Q96K76 1375 aa13.81□□□□□ -0.2
CCL28-203ENST00000513525 SOX12O15370 315 aa13.8□□□□□ -0.2
CCL28-203ENST00000513525 NME9Q86XW9 330 aa13.8□□□□□ -0.2
CCL28-203ENST00000513525 SLC39A7Q92504 469 aa13.8□□□□□ -0.2
CCL28-203ENST00000513525 CDCA7Q9BWT1 371 aaPredicted RBP13.8□□□□□ -0.2
CCL28-203ENST00000513525 CARD10Q9BWT7 1032 aa13.8□□□□□ -0.2
CCL28-203ENST00000513525 TIMELESSQ9UNS1 1208 aa13.8□□□□□ -0.2
CCL28-203ENST00000513525 RGPD2P0DJD1 1756 aa13.8□□□□□ -0.2
CCL28-203ENST00000513525 CCDC7Q96M83 1385 aa13.8□□□□□ -0.2
CCL28-203ENST00000513525 CAMKK2Q96RR4 588 aa13.8□□□□□ -0.2
CCL28-203ENST00000513525 METRNQ9UJH8 293 aa13.8□□□□□ -0.2
CCL28-203ENST00000513525 BCL9O00512 1426 aa13.79□□□□□ -0.2
CCL28-203ENST00000513525 C7P10643 843 aa13.79□□□□□ -0.2
CCL28-203ENST00000513525 DDB1Q16531 1140 aa13.79□□□□□ -0.2
CCL28-203ENST00000513525 MAMSTRQ6ZN01 415 aa13.79□□□□□ -0.2
CCL28-203ENST00000513525 PCDH10Q9P2E7 1040 aa13.79□□□□□ -0.2
CCL28-203ENST00000513525 ANKRD36BQ8N2N9 1353 aa13.78□□□□□ -0.2
CCL28-203ENST00000513525 KAT6BQ8WYB5 2073 aa13.78□□□□□ -0.2
CCL28-203ENST00000513525 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
CCL28-203ENST00000513525 EZH2Q15910 746 aaKnown RBP13.78□□□□□ -0.2
CCL28-203ENST00000513525 ASTLQ6HA08 431 aaPredicted RBP13.78□□□□□ -0.2
CCL28-203ENST00000513525 PELP1Q8IZL8 1130 aaKnown RBP13.78□□□□□ -0.2
CCL28-203ENST00000513525 NHSQ6T4R5 1651 aa13.78□□□□□ -0.2
CCL28-203ENST00000513525 ERBB3P21860 1342 aa13.77□□□□□ -0.2
CCL28-203ENST00000513525 TNS2Q63HR2 1409 aa13.77□□□□□ -0.2
CCL28-203ENST00000513525 APBA3O96018 575 aa13.77□□□□□ -0.21
CCL28-203ENST00000513525 CSB-PGBD3P0DP91 1061 aa13.77□□□□□ -0.21
CCL28-203ENST00000513525 TMF1P82094 1093 aa13.76□□□□□ -0.21
CCL28-203ENST00000513525 MS4A3Q96HJ5 214 aa13.75□□□□□ -0.21
CCL28-203ENST00000513525 SHANK3Q9BYB0 1731 aa13.74□□□□□ -0.21
CCL28-203ENST00000513525 BTAF1O14981 1849 aa13.74□□□□□ -0.21
CCL28-203ENST00000513525 PSDA5PKW4 1024 aaPredicted RBP13.74□□□□□ -0.21
CCL28-203ENST00000513525 ANKRD26Q9UPS8 1709 aa13.73□□□□□ -0.21
CCL28-203ENST00000513525 MARCH10Q8NA82 808 aaPredicted RBP13.73□□□□□ -0.21
CCL28-203ENST00000513525 MAP2P11137 1827 aaKnown RBP13.72□□□□□ -0.21
CCL28-203ENST00000513525 ZNF316A6NFI3 1004 aaPredicted RBP13.72□□□□□ -0.21
CCL28-203ENST00000513525 EXOC5O00471 708 aa13.72□□□□□ -0.21
CCL28-203ENST00000513525 ATMINO43313 823 aaPredicted RBP13.72□□□□□ -0.21
CCL28-203ENST00000513525 R3HDM1Q15032 1099 aaKnown RBP13.72□□□□□ -0.21
CCL28-203ENST00000513525 CDCA8Q53HL2 280 aa13.72□□□□□ -0.21
CCL28-203ENST00000513525 IP6K1Q92551 441 aa13.72□□□□□ -0.21
CCL28-203ENST00000513525 COG3Q96JB2 828 aa13.72□□□□□ -0.21
CCL28-203ENST00000513525 PLSCR1O15162 318 aa13.71□□□□□ -0.21
CCL28-203ENST00000513525 ANKRD24Q8TF21 1146 aa13.71□□□□□ -0.21
CCL28-203ENST00000513525 BCL11BQ9C0K0 894 aaPredicted RBP13.71□□□□□ -0.21
CCL28-203ENST00000513525 CASZ1Q86V15 1759 aa13.7□□□□□ -0.22
CCL28-203ENST00000513525 NLRP2Q9NX02 1062 aa13.7□□□□□ -0.22
CCL28-203ENST00000513525 RTL1A6NKG5 1358 aa13.7□□□□□ -0.22
CCL28-203ENST00000513525 IL2RBP14784 551 aa13.69□□□□□ -0.22
CCL28-203ENST00000513525 DOT1LQ8TEK3 1739 aa13.69□□□□□ -0.22
CCL28-203ENST00000513525 MAP3K19Q56UN5 1328 aa13.68□□□□□ -0.22
CCL28-203ENST00000513525 FYB1O15117 783 aa13.68□□□□□ -0.22
CCL28-203ENST00000513525 NBPF14Q5TI25 921 aa13.68□□□□□ -0.22
CCL28-203ENST00000513525 HOXC9P31274 260 aa13.67□□□□□ -0.22
CCL28-203ENST00000513525 SCUBE2Q9NQ36 999 aa13.67□□□□□ -0.22
CCL28-203ENST00000513525 PTF1AQ7RTS3 328 aa13.66□□□□□ -0.22
CCL28-203ENST00000513525 KIF24Q5T7B8 1368 aa13.66□□□□□ -0.22
CCL28-203ENST00000513525 PAPPAQ13219 1627 aa13.66□□□□□ -0.22
CCL28-203ENST00000513525 LY75O60449 1722 aa13.66□□□□□ -0.22
CCL28-203ENST00000513525 QSER1Q2KHR3 1735 aa13.66□□□□□ -0.22
CCL28-203ENST00000513525 GGNBP2Q9H3C7 697 aa13.65□□□□□ -0.22
CCL28-203ENST00000513525 AMPHP49418 695 aa13.64□□□□□ -0.23
CCL28-203ENST00000513525 PKD1L3Q7Z443 1732 aa13.64□□□□□ -0.23
CCL28-203ENST00000513525 NSD3Q9BZ95 1437 aa13.64□□□□□ -0.23
CCL28-203ENST00000513525 FBLN1P23142 703 aa13.64□□□□□ -0.23
CCL28-203ENST00000513525 SMG6Q86US8 1419 aaKnown RBP13.63□□□□□ -0.23
CCL28-203ENST00000513525 RRS1Q15050 365 aaKnown RBP13.63□□□□□ -0.23
CCL28-203ENST00000513525 PROM2Q8N271 834 aa13.63□□□□□ -0.23
CCL28-203ENST00000513525 LTV1Q96GA3 475 aaPredicted RBP13.63□□□□□ -0.23
CCL28-203ENST00000513525 CARD14Q9BXL6 1004 aa13.63□□□□□ -0.23
CCL28-203ENST00000513525 MEGF6O75095 1541 aa13.62□□□□□ -0.23
CCL28-203ENST00000513525 INSRP06213 1382 aa13.62□□□□□ -0.23
CCL28-203ENST00000513525 FLT4P35916 1363 aa13.62□□□□□ -0.23
CCL28-203ENST00000513525 ITGB4P16144 1822 aa13.62□□□□□ -0.23
CCL28-203ENST00000513525 TUBGCP6Q96RT7 1819 aa13.62□□□□□ -0.23
CCL28-203ENST00000513525 KCNQ2O43526 872 aa13.62□□□□□ -0.23
CCL28-203ENST00000513525 DIEXFQ68CQ4 756 aaKnown RBP13.62□□□□□ -0.23
CCL28-203ENST00000513525 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
CCL28-203ENST00000513525 TXNRD1Q16881 649 aa13.61□□□□□ -0.23
CCL28-203ENST00000513525 ANO8Q9HCE9 1232 aaPredicted RBP13.61□□□□□ -0.23
CCL28-203ENST00000513525 EIF4G2P78344 907 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCL28-203ENST00000513525 ACSBG1Q96GR2 724 aa13.59□□□□□ -0.23
CCL28-203ENST00000513525 CGNL1Q0VF96 1302 aa13.59□□□□□ -0.23
CCL28-203ENST00000513525 TAF1LQ8IZX4 1826 aa13.59□□□□□ -0.23
CCL28-203ENST00000513525 NBPF6Q5VWK0 638 aa13.59□□□□□ -0.23
CCL28-203ENST00000513525 NBPF4Q96M43 638 aa13.59□□□□□ -0.23
CCL28-203ENST00000513525 NCAPD2Q15021 1401 aa13.58□□□□□ -0.23
CCL28-203ENST00000513525 COL24A1Q17RW2 1714 aa13.58□□□□□ -0.24
CCL28-203ENST00000513525 POTEJP0CG39 1038 aa13.58□□□□□ -0.24
CCL28-203ENST00000513525 TOGARAM1Q9Y4F4 1720 aa13.58□□□□□ -0.24
CCL28-203ENST00000513525 HSPA5P11021 654 aaKnown RBP13.57□□□□□ -0.24
CCL28-203ENST00000513525 HSP90AB2PQ58FF8 381 aa13.57□□□□□ -0.24
CCL28-203ENST00000513525 ZCRB1Q8TBF4 217 aaKnown RBP13.57□□□□□ -0.24
CCL28-203ENST00000513525 SPON1Q9HCB6 807 aa13.57□□□□□ -0.24
CCL28-203ENST00000513525 ATN1P54259 1190 aaPredicted RBP13.56□□□□□ -0.24
CCL28-203ENST00000513525 SLC15A2Q16348 729 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms