RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 PLEKHM2Q8IWE5 1019 aa9.25□□□□□ -0.93
CHD1-210ENST00000513064 LINC00528Q8N1L1 170 aa9.25□□□□□ -0.93
CHD1-210ENST00000513064 AGBL1Q96MI9 1066 aa9.25□□□□□ -0.93
CHD1-210ENST00000513064 PPP1R12CQ9BZL4 782 aa9.25□□□□□ -0.93
CHD1-210ENST00000513064 ESF1Q9H501 851 aaKnown RBP9.25□□□□□ -0.93
CHD1-210ENST00000513064 PALM3A6NDB9 673 aaPredicted RBP9.24□□□□□ -0.93
CHD1-210ENST00000513064 PTGIRP43119 386 aa9.24□□□□□ -0.93
CHD1-210ENST00000513064 ARID3CA6NKF2 412 aa9.23□□□□□ -0.93
CHD1-210ENST00000513064 ATP5J2-PTCD1G3V325 749 aa9.23□□□□□ -0.93
CHD1-210ENST00000513064 SPINT1O43278 529 aa9.23□□□□□ -0.93
CHD1-210ENST00000513064 NCOA4Q13772 614 aa9.23□□□□□ -0.93
CHD1-210ENST00000513064 CYP2U1Q7Z449 544 aa9.23□□□□□ -0.93
CHD1-210ENST00000513064 ZFP42Q96MM3 310 aa9.23□□□□□ -0.93
CHD1-210ENST00000513064 PURBQ96QR8 312 aaKnown RBP9.23□□□□□ -0.93
CHD1-210ENST00000513064 GMPR2Q9P2T1 348 aaKnown RBP9.23□□□□□ -0.93
CHD1-210ENST00000513064 MAFBQ9Y5Q3 323 aaPredicted RBP9.23□□□□□ -0.93
CHD1-210ENST00000513064 USP17L3A6NCW0 530 aa9.22□□□□□ -0.93
CHD1-210ENST00000513064 USP17L4A6NCW7 530 aa9.22□□□□□ -0.93
CHD1-210ENST00000513064 BMP2P12643 396 aa9.22□□□□□ -0.93
CHD1-210ENST00000513064 RELBQ01201 579 aa9.22□□□□□ -0.93
CHD1-210ENST00000513064 EML3Q32P44 896 aa9.22□□□□□ -0.93
CHD1-210ENST00000513064 USP17L2Q6R6M4 530 aa9.22□□□□□ -0.93
CHD1-210ENST00000513064 USP17L1Q7RTZ2 530 aa9.22□□□□□ -0.93
CHD1-210ENST00000513064 DEPDC4Q8N2C3 294 aa9.22□□□□□ -0.93
CHD1-210ENST00000513064 SENP2Q9HC62 589 aa9.22□□□□□ -0.93
CHD1-210ENST00000513064 POTECB2RU33 542 aa9.21□□□□□ -0.94
CHD1-210ENST00000513064 C6orf118Q5T5N4 469 aa9.21□□□□□ -0.94
CHD1-210ENST00000513064 TRIM47Q96LD4 638 aa9.21□□□□□ -0.94
CHD1-210ENST00000513064 GNRH1P01148 92 aa9.2□□□□□ -0.94
CHD1-210ENST00000513064 KIFC2Q96AC6 838 aa9.2□□□□□ -0.94
CHD1-210ENST00000513064 C1orf115Q9H7X2 142 aa9.2□□□□□ -0.94
CHD1-210ENST00000513064 ZNF395Q9H8N7 513 aaPredicted RBP9.2□□□□□ -0.94
CHD1-210ENST00000513064 NOD1Q9Y239 953 aa9.2□□□□□ -0.94
CHD1-210ENST00000513064 PCDHGA11Q9Y5H2 935 aa9.2□□□□□ -0.94
CHD1-210ENST00000513064 CFAP70Q5T0N1 1121 aa9.19□□□□□ -0.94
CHD1-210ENST00000513064 SERPINA10Q9UK55 444 aa9.19□□□□□ -0.94
CHD1-210ENST00000513064 A0A1W2PRU2 124 aa9.18□□□□□ -0.94
CHD1-210ENST00000513064 CLN3Q13286 438 aa9.18□□□□□ -0.94
CHD1-210ENST00000513064 INSM2Q96T92 566 aaPredicted RBP9.18□□□□□ -0.94
CHD1-210ENST00000513064 SOS2Q07890 1332 aaPredicted RBP9.17□□□□□ -0.94
CHD1-210ENST00000513064 C11orf95C9JLR9 678 aaPredicted RBP9.17□□□□□ -0.94
CHD1-210ENST00000513064 LMOD1P29536 600 aaPredicted RBP9.17□□□□□ -0.94
CHD1-210ENST00000513064 TRIM50Q86XT4 487 aa9.17□□□□□ -0.94
CHD1-210ENST00000513064 CCDC97Q96F63 343 aaPredicted RBP9.17□□□□□ -0.94
CHD1-210ENST00000513064 MKRN1Q9UHC7 482 aaKnown RBP9.17□□□□□ -0.94
CHD1-210ENST00000513064 SNRPBP14678 240 aaKnown RBP9.16□□□□□ -0.94
CHD1-210ENST00000513064 CTSOP43234 321 aaPredicted RBP9.16□□□□□ -0.94
CHD1-210ENST00000513064 GTF2IP78347 998 aa9.16□□□□□ -0.94
CHD1-210ENST00000513064 KANK4Q5T7N3 995 aaPredicted RBP9.16□□□□□ -0.94
CHD1-210ENST00000513064 ARHGEF10LQ9HCE6 1279 aa9.16□□□□□ -0.94
CHD1-210ENST00000513064 TTLL8A6PVC2 850 aa9.15□□□□□ -0.94
CHD1-210ENST00000513064 ESCO1Q5FWF5 840 aa9.15□□□□□ -0.94
CHD1-210ENST00000513064 ZNF787Q6DD87 383 aa9.15□□□□□ -0.94
CHD1-210ENST00000513064 XAGE2Q96GT9 111 aa9.15□□□□□ -0.94
CHD1-210ENST00000513064 SUPT5HO00267 1087 aaKnown RBP9.14□□□□□ -0.95
CHD1-210ENST00000513064 WASLO00401 505 aaPredicted RBP9.14□□□□□ -0.95
CHD1-210ENST00000513064 ZBTB7BO15156 539 aaPredicted RBP9.14□□□□□ -0.95
CHD1-210ENST00000513064 IL2RAP01589 272 aa9.14□□□□□ -0.95
CHD1-210ENST00000513064 RNF144AP50876 292 aaPredicted RBP9.14□□□□□ -0.95
CHD1-210ENST00000513064 ATP1A2P50993 1020 aa9.14□□□□□ -0.95
CHD1-210ENST00000513064 SCNN1DP51172 638 aa9.14□□□□□ -0.95
CHD1-210ENST00000513064 CLDN10P78369 228 aa9.14□□□□□ -0.95
CHD1-210ENST00000513064 CCDC82Q8N4S0 544 aa9.14□□□□□ -0.95
CHD1-210ENST00000513064 CNKSR1Q969H4 720 aa9.14□□□□□ -0.95
CHD1-210ENST00000513064 ESYT1Q9BSJ8 1104 aa9.14□□□□□ -0.95
CHD1-210ENST00000513064 ETNK1Q9HBU6 452 aa9.14□□□□□ -0.95
CHD1-210ENST00000513064 HRH3Q9Y5N1 445 aa9.14□□□□□ -0.95
CHD1-210ENST00000513064 MEN1O00255 615 aa9.13□□□□□ -0.95
CHD1-210ENST00000513064 STAU1O95793 577 aaKnown RBP9.13□□□□□ -0.95
CHD1-210ENST00000513064 INHAP05111 366 aa9.13□□□□□ -0.95
CHD1-210ENST00000513064 GPC1P35052 558 aa9.13□□□□□ -0.95
CHD1-210ENST00000513064 LARGE2Q8N3Y3 721 aa9.13□□□□□ -0.95
CHD1-210ENST00000513064 OGFOD1Q8N543 542 aa9.13□□□□□ -0.95
CHD1-210ENST00000513064 VRTNQ9H8Y1 702 aa9.13□□□□□ -0.95
CHD1-210ENST00000513064 POLMQ9NP87 494 aaPredicted RBP9.13□□□□□ -0.95
CHD1-210ENST00000513064 RAB6BQ9NRW1 208 aa9.13□□□□□ -0.95
CHD1-210ENST00000513064 GDF10P55107 478 aa9.12□□□□□ -0.95
CHD1-210ENST00000513064 SRPK2P78362 688 aaKnown RBP9.12□□□□□ -0.95
CHD1-210ENST00000513064 FOXD4L5Q5VV16 416 aaPredicted RBP9.12□□□□□ -0.95
CHD1-210ENST00000513064 RNF217Q8TC41 542 aa9.12□□□□□ -0.95
CHD1-210ENST00000513064 NLRP3Q96P20 1036 aa9.12□□□□□ -0.95
CHD1-210ENST00000513064 DNAAF2Q9NVR5 837 aaKnown RBP9.12□□□□□ -0.95
CHD1-210ENST00000513064 DNMT3LQ9UJW3 386 aa9.12□□□□□ -0.95
CHD1-210ENST00000513064 TMEM229AB2RXF0 380 aa9.11□□□□□ -0.95
CHD1-210ENST00000513064 MAN1A2O60476 641 aa9.11□□□□□ -0.95
CHD1-210ENST00000513064 RASA1P20936 1047 aa9.11□□□□□ -0.95
CHD1-210ENST00000513064 RFX1P22670 979 aa9.11□□□□□ -0.95
CHD1-210ENST00000513064 GRIP2Q9C0E4 1043 aa9.11□□□□□ -0.95
CHD1-210ENST00000513064 KIAA1024Q9UPX6 916 aa9.11□□□□□ -0.95
CHD1-210ENST00000513064 CENPCQ03188 943 aa9.1□□□□□ -0.95
CHD1-210ENST00000513064 PSME1Q06323 249 aa9.1□□□□□ -0.95
CHD1-210ENST00000513064 SIX5Q8N196 739 aa9.1□□□□□ -0.95
CHD1-210ENST00000513064 SLC4A9Q96Q91 983 aa9.1□□□□□ -0.95
CHD1-210ENST00000513064 FIGNL2A6NMB9 653 aa9.09□□□□□ -0.95
CHD1-210ENST00000513064 SOBPA7XYQ1 873 aa9.09□□□□□ -0.95
CHD1-210ENST00000513064 DKK1O94907 266 aa9.09□□□□□ -0.95
CHD1-210ENST00000513064 PTK7Q13308 1070 aa9.09□□□□□ -0.95
CHD1-210ENST00000513064 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.09□□□□□ -0.95
CHD1-210ENST00000513064 CCDC102BQ68D86 513 aa9.09□□□□□ -0.95
CHD1-210ENST00000513064 LARP1Q6PKG0 1096 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms