RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 KCNQ2O43526 872 aa8.91□□□□□ -0.98
KDM3B-208ENST00000512928 CNGB1Q14028 1251 aaPredicted RBP8.91□□□□□ -0.98
KDM3B-208ENST00000512928 NBPF14Q5TI25 921 aa8.91□□□□□ -0.98
KDM3B-208ENST00000512928 NBPF6Q5VWK0 638 aa8.91□□□□□ -0.98
KDM3B-208ENST00000512928 NBPF4Q96M43 638 aa8.91□□□□□ -0.98
KDM3B-208ENST00000512928 ANKRD26Q9UPS8 1709 aa8.91□□□□□ -0.98
KDM3B-208ENST00000512928 MEGF6O75095 1541 aa8.9□□□□□ -0.98
KDM3B-208ENST00000512928 KIF24Q5T7B8 1368 aa8.9□□□□□ -0.98
KDM3B-208ENST00000512928 ZBTB7AO95365 584 aa8.9□□□□□ -0.98
KDM3B-208ENST00000512928 TATP17735 454 aaPredicted RBP8.9□□□□□ -0.98
KDM3B-208ENST00000512928 MORC1Q86VD1 984 aa8.9□□□□□ -0.98
KDM3B-208ENST00000512928 ZCRB1Q8TBF4 217 aaKnown RBP8.9□□□□□ -0.98
KDM3B-208ENST00000512928 RGPD3A6NKT7 1758 aaPredicted RBP8.9□□□□□ -0.98
KDM3B-208ENST00000512928 RGPD4Q7Z3J3 1758 aa8.9□□□□□ -0.98
KDM3B-208ENST00000512928 NHSQ6T4R5 1651 aa8.9□□□□□ -0.98
KDM3B-208ENST00000512928 PROM2Q8N271 834 aa8.89□□□□□ -0.99
KDM3B-208ENST00000512928 BCL9O00512 1426 aa8.88□□□□□ -0.99
KDM3B-208ENST00000512928 NSD2O96028 1365 aa8.88□□□□□ -0.99
KDM3B-208ENST00000512928 PLSCR1O15162 318 aa8.88□□□□□ -0.99
KDM3B-208ENST00000512928 POLKQ9UBT6 870 aa8.88□□□□□ -0.99
KDM3B-208ENST00000512928 PPP1R1BQ9UD71 204 aaPredicted RBP8.88□□□□□ -0.99
KDM3B-208ENST00000512928 ATF5Q9Y2D1 282 aaPredicted RBP8.88□□□□□ -0.99
KDM3B-208ENST00000512928 MAP2P11137 1827 aaKnown RBP8.87□□□□□ -0.99
KDM3B-208ENST00000512928 TUBGCP6Q96RT7 1819 aa8.87□□□□□ -0.99
KDM3B-208ENST00000512928 WASHC2AQ641Q2 1341 aa8.87□□□□□ -0.99
KDM3B-208ENST00000512928 CC2D1BQ5T0F9 858 aaKnown RBP8.87□□□□□ -0.99
KDM3B-208ENST00000512928 DOT1LQ8TEK3 1739 aa8.87□□□□□ -0.99
KDM3B-208ENST00000512928 PCDH11XQ9BZA7 1347 aa8.86□□□□□ -0.99
KDM3B-208ENST00000512928 PCDH11YQ9BZA8 1340 aa8.86□□□□□ -0.99
KDM3B-208ENST00000512928 PRIM1P49642 420 aaKnown RBP8.86□□□□□ -0.99
KDM3B-208ENST00000512928 TXNRD1Q16881 649 aa8.86□□□□□ -0.99
KDM3B-208ENST00000512928 SPON1Q9HCB6 807 aa8.86□□□□□ -0.99
KDM3B-208ENST00000512928 BTAF1O14981 1849 aa8.86□□□□□ -0.99
KDM3B-208ENST00000512928 PAPPAQ13219 1627 aa8.86□□□□□ -0.99
KDM3B-208ENST00000512928 SHANK3Q9BYB0 1731 aa8.85□□□□□ -0.99
KDM3B-208ENST00000512928 PTGER2P43116 358 aa8.85□□□□□ -0.99
KDM3B-208ENST00000512928 EIF4A2Q14240 407 aaKnown RBP8.85□□□□□ -0.99
KDM3B-208ENST00000512928 EYA1Q99502 592 aa8.85□□□□□ -0.99
KDM3B-208ENST00000512928 STK32BQ9NY57 414 aa8.85□□□□□ -0.99
KDM3B-208ENST00000512928 SPG7Q9UQ90 795 aa8.85□□□□□ -0.99
KDM3B-208ENST00000512928 ZEB1P37275 1124 aaPredicted RBP8.84□□□□□ -0.99
KDM3B-208ENST00000512928 MPRIPQ6WCQ1 1025 aa8.84□□□□□ -0.99
KDM3B-208ENST00000512928 CNKSR2Q8WXI2 1034 aa8.84□□□□□ -0.99
KDM3B-208ENST00000512928 KCNQ4P56696 695 aa8.83□□□□□ -1
KDM3B-208ENST00000512928 AMER1Q5JTC6 1135 aaPredicted RBP8.83□□□□□ -1
KDM3B-208ENST00000512928 FHDC1Q9C0D6 1143 aaPredicted RBP8.83□□□□□ -1
KDM3B-208ENST00000512928 KAT6BQ8WYB5 2073 aa8.82□□□□□ -1
KDM3B-208ENST00000512928 CYP27B1O15528 508 aa8.82□□□□□ -1
KDM3B-208ENST00000512928 SLC15A2Q16348 729 aa8.82□□□□□ -1
KDM3B-208ENST00000512928 ZNF827Q17R98 1081 aa8.82□□□□□ -1
KDM3B-208ENST00000512928 PKD1L3Q7Z443 1732 aa8.82□□□□□ -1
KDM3B-208ENST00000512928 MTHFSP49914 203 aa8.81□□□□□ -1
KDM3B-208ENST00000512928 ZNF784Q8NCA9 323 aaPredicted RBP8.81□□□□□ -1
KDM3B-208ENST00000512928 CCNL1Q9UK58 526 aaPredicted RBP8.81□□□□□ -1
KDM3B-208ENST00000512928 CHD4Q14839 1912 aa8.81□□□□□ -1
KDM3B-208ENST00000512928 IGSF1Q8N6C5 1336 aa8.8□□□□□ -1
KDM3B-208ENST00000512928 NCAPD2Q15021 1401 aa8.8□□□□□ -1
KDM3B-208ENST00000512928 PER1O15534 1290 aaPredicted RBP8.8□□□□□ -1
KDM3B-208ENST00000512928 SLC27A3Q5K4L6 730 aa8.8□□□□□ -1
KDM3B-208ENST00000512928 SULT6B1Q6IMI4 303 aa8.8□□□□□ -1
KDM3B-208ENST00000512928 AEBP1Q8IUX7 1158 aa8.8□□□□□ -1
KDM3B-208ENST00000512928 IFNL2Q8IZJ0 200 aa8.8□□□□□ -1
KDM3B-208ENST00000512928 SGIP1Q9BQI5 828 aa8.8□□□□□ -1
KDM3B-208ENST00000512928 LRRC4BQ9NT99 713 aa8.8□□□□□ -1
KDM3B-208ENST00000512928 TOGARAM1Q9Y4F4 1720 aa8.8□□□□□ -1
KDM3B-208ENST00000512928 PALLDQ8WX93 1383 aa8.79□□□□□ -1
KDM3B-208ENST00000512928 PHKG2P15735 406 aa8.79□□□□□ -1
KDM3B-208ENST00000512928 PLEKHO1Q53GL0 409 aaPredicted RBP8.79□□□□□ -1
KDM3B-208ENST00000512928 ZNF530Q6P9A1 599 aaPredicted RBP8.79□□□□□ -1
KDM3B-208ENST00000512928 SYT17Q9BSW7 474 aa8.79□□□□□ -1
KDM3B-208ENST00000512928 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.79□□□□□ -17e-7■□□□□ 8.4
KDM3B-208ENST00000512928 TMOD3Q9NYL9 352 aa8.79□□□□□ -1
KDM3B-208ENST00000512928 TFCP2L1Q9NZI6 479 aa8.79□□□□□ -1
KDM3B-208ENST00000512928 U2SURPO15042 1029 aaKnown RBP8.78□□□□□ -1
KDM3B-208ENST00000512928 DIAPH1O60610 1272 aaKnown RBP8.78□□□□□ -1
KDM3B-208ENST00000512928 HMOX1P09601 288 aa8.78□□□□□ -1
KDM3B-208ENST00000512928 IL13P35225 146 aa8.78□□□□□ -1
KDM3B-208ENST00000512928 C1orf141Q5JVX7 400 aa8.78□□□□□ -1
KDM3B-208ENST00000512928 KLHL34Q8N239 644 aa8.78□□□□□ -1
KDM3B-208ENST00000512928 LY75O60449 1722 aa8.77□□□□□ -1
KDM3B-208ENST00000512928 HOXD11P31277 338 aaPredicted RBP8.77□□□□□ -1.01
KDM3B-208ENST00000512928 AMOTQ4VCS5 1084 aa8.77□□□□□ -1.01
KDM3B-208ENST00000512928 PIGBQ92521 554 aa8.77□□□□□ -1.01
KDM3B-208ENST00000512928 SMARCC1Q92922 1105 aaPredicted RBP8.77□□□□□ -1.01
KDM3B-208ENST00000512928 ITGB4P16144 1822 aa8.77□□□□□ -1.01
KDM3B-208ENST00000512928 C5P01031 1676 aa8.76□□□□□ -1.01
KDM3B-208ENST00000512928 HSP90AB1P08238 724 aaKnown RBP8.76□□□□□ -1.01
KDM3B-208ENST00000512928 NKX1-1Q15270 411 aaPredicted RBP8.76□□□□□ -1.01
KDM3B-208ENST00000512928 NCBP3Q53F19 620 aaKnown RBP8.76□□□□□ -1.01
KDM3B-208ENST00000512928 NLGN2Q8NFZ4 835 aa8.76□□□□□ -1.01
KDM3B-208ENST00000512928 AKT1S1Q96B36 256 aa8.76□□□□□ -1.01
KDM3B-208ENST00000512928 CFAP53Q96M91 514 aa8.76□□□□□ -1.01
KDM3B-208ENST00000512928 MTFR1LQ9H019 292 aa8.76□□□□□ -1.01
KDM3B-208ENST00000512928 COL24A1Q17RW2 1714 aa8.76□□□□□ -1.01
KDM3B-208ENST00000512928 NPC1L1Q9UHC9 1359 aa8.75□□□□□ -1.01
KDM3B-208ENST00000512928 QSER1Q2KHR3 1735 aa8.75□□□□□ -1.01
KDM3B-208ENST00000512928 SENP3-EIF4A1A0A087X0R7 540 aa8.75□□□□□ -1.01
KDM3B-208ENST00000512928 CABP4P57796 275 aa8.75□□□□□ -1.01
KDM3B-208ENST00000512928 PELP1Q8IZL8 1130 aaKnown RBP8.75□□□□□ -1.01
KDM3B-208ENST00000512928 DCAF5Q96JK2 942 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms