RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 THRAP3Q9Y2W1 955 aaKnown RBP12.66□□□□□ -0.38
MSH3-203ENST00000512531 CDK19Q9BWU1 502 aa12.65□□□□□ -0.38
MSH3-203ENST00000512531 PHRF1Q9P1Y6 1649 aaKnown RBP12.65□□□□□ -0.38
MSH3-203ENST00000512531 USP19O94966 1318 aa12.64□□□□□ -0.39
MSH3-203ENST00000512531 SSH2Q76I76 1423 aa12.64□□□□□ -0.39
MSH3-203ENST00000512531 R3HDM1Q15032 1099 aaKnown RBP12.64□□□□□ -0.39
MSH3-203ENST00000512531 E2F4Q16254 413 aa12.64□□□□□ -0.39
MSH3-203ENST00000512531 KNSTRNQ9Y448 316 aa12.64□□□□□ -0.39
MSH3-203ENST00000512531 TOPAZ1Q8N9V7 1692 aa12.64□□□□□ -0.39
MSH3-203ENST00000512531 ACEP12821 1306 aa12.63□□□□□ -0.39
MSH3-203ENST00000512531 EZH2Q15910 746 aaKnown RBP12.63□□□□□ -0.39
MSH3-203ENST00000512531 FAM182BQ5T319 152 aa12.63□□□□□ -0.39
MSH3-203ENST00000512531 TCP11L2Q8N4U5 519 aa12.63□□□□□ -0.39
MSH3-203ENST00000512531 INSRP06213 1382 aa12.63□□□□□ -0.39
MSH3-203ENST00000512531 MAP3K13O43283 966 aa12.62□□□□□ -0.39
MSH3-203ENST00000512531 TRIM37O94972 964 aa12.62□□□□□ -0.39
MSH3-203ENST00000512531 APBA3O96018 575 aa12.62□□□□□ -0.39
MSH3-203ENST00000512531 EVA1CP58658 441 aa12.62□□□□□ -0.39
MSH3-203ENST00000512531 ZC3H6P61129 1189 aaKnown RBP12.62□□□□□ -0.39
MSH3-203ENST00000512531 PDE3BQ13370 1112 aa12.62□□□□□ -0.39
MSH3-203ENST00000512531 CHRNA2Q15822 529 aa12.62□□□□□ -0.39
MSH3-203ENST00000512531 TESK2Q96S53 571 aa12.62□□□□□ -0.39
MSH3-203ENST00000512531 CABP2Q9NPB3 220 aa12.62□□□□□ -0.39
MSH3-203ENST00000512531 STRN4Q9NRL3 753 aa12.62□□□□□ -0.39
MSH3-203ENST00000512531 PRKAR2AP13861 404 aaKnown RBP12.61□□□□□ -0.39
MSH3-203ENST00000512531 NBPF14Q5TI25 921 aa12.61□□□□□ -0.39
MSH3-203ENST00000512531 ABTB2Q8N961 1025 aa12.61□□□□□ -0.39
MSH3-203ENST00000512531 MS4A4AQ96JQ5 239 aa12.61□□□□□ -0.39
MSH3-203ENST00000512531 SLC24A3Q9HC58 644 aa12.61□□□□□ -0.39
MSH3-203ENST00000512531 LMO7Q8WWI1 1683 aa12.61□□□□□ -0.39
MSH3-203ENST00000512531 CAMTA1Q9Y6Y1 1673 aa12.61□□□□□ -0.39
MSH3-203ENST00000512531 NRKQ7Z2Y5 1582 aa12.6□□□□□ -0.39
MSH3-203ENST00000512531 KIF12Q96FN5 646 aa12.6□□□□□ -0.39
MSH3-203ENST00000512531 SBNO2Q9Y2G9 1366 aa12.59□□□□□ -0.39
MSH3-203ENST00000512531 RREB1Q92766 1687 aa12.59□□□□□ -0.39
MSH3-203ENST00000512531 GCP02774 474 aa12.59□□□□□ -0.39
MSH3-203ENST00000512531 NLRP6P59044 892 aa12.59□□□□□ -0.39
MSH3-203ENST00000512531 LARP1Q6PKG0 1096 aaKnown RBP12.59□□□□□ -0.39
MSH3-203ENST00000512531 PANK3Q9H999 370 aa12.59□□□□□ -0.39
MSH3-203ENST00000512531 PNISRQ8TF01 805 aaKnown RBP12.58□□□□□ -0.4
MSH3-203ENST00000512531 AATKQ6ZMQ8 1374 aa12.57□□□□□ -0.4
MSH3-203ENST00000512531 NPC1L1Q9UHC9 1359 aa12.57□□□□□ -0.4
MSH3-203ENST00000512531 PARP4Q9UKK3 1724 aaKnown RBP12.57□□□□□ -0.4
MSH3-203ENST00000512531 NUTM2GQ5VZR2 741 aa12.57□□□□□ -0.4
MSH3-203ENST00000512531 USP35Q9P2H5 1018 aa12.57□□□□□ -0.4
MSH3-203ENST00000512531 COL5A2P05997 1499 aaPredicted RBP12.57□□□□□ -0.4
MSH3-203ENST00000512531 CRB1P82279 1406 aa12.56□□□□□ -0.4
MSH3-203ENST00000512531 PPIP5K1Q6PFW1 1433 aa12.56□□□□□ -0.4
MSH3-203ENST00000512531 SMG6Q86US8 1419 aaKnown RBP12.56□□□□□ -0.4
MSH3-203ENST00000512531 PLSCR1O15162 318 aa12.56□□□□□ -0.4
MSH3-203ENST00000512531 SOX12O15370 315 aa12.56□□□□□ -0.4
MSH3-203ENST00000512531 CNGB1Q14028 1251 aaPredicted RBP12.56□□□□□ -0.4
MSH3-203ENST00000512531 CENPJQ9HC77 1338 aaPredicted RBP12.56□□□□□ -0.4
MSH3-203ENST00000512531 RGPD3A6NKT7 1758 aaPredicted RBP12.56□□□□□ -0.4
MSH3-203ENST00000512531 RGPD4Q7Z3J3 1758 aa12.56□□□□□ -0.4
MSH3-203ENST00000512531 BCL9O00512 1426 aa12.55□□□□□ -0.4
MSH3-203ENST00000512531 NUP188Q5SRE5 1749 aa12.55□□□□□ -0.4
MSH3-203ENST00000512531 FXR2P51116 673 aaKnown RBP eCLIP12.55□□□□□ -0.4
MSH3-203ENST00000512531 PUS7Q96PZ0 661 aaKnown RBP12.55□□□□□ -0.4
MSH3-203ENST00000512531 CDCA7Q9BWT1 371 aaPredicted RBP12.55□□□□□ -0.4
MSH3-203ENST00000512531 NUDCQ9Y266 331 aa12.55□□□□□ -0.4
MSH3-203ENST00000512531 OVOS2A0A0G2JMS6 1433 aa12.54□□□□□ -0.4
MSH3-203ENST00000512531 OVOS2A0A0J9YW53 1432 aa12.54□□□□□ -0.4
MSH3-203ENST00000512531 OVOS2Q6IE36 1432 aa12.54□□□□□ -0.4
MSH3-203ENST00000512531 SLIT3O75094 1523 aa12.54□□□□□ -0.4
MSH3-203ENST00000512531 PER1O15534 1290 aaPredicted RBP12.54□□□□□ -0.4
MSH3-203ENST00000512531 SRPK2P78362 688 aaKnown RBP12.54□□□□□ -0.4
MSH3-203ENST00000512531 MFSD10Q14728 455 aa12.54□□□□□ -0.4
MSH3-203ENST00000512531 CCDC184Q52MB2 194 aa12.54□□□□□ -0.4
MSH3-203ENST00000512531 SPON1Q9HCB6 807 aa12.54□□□□□ -0.4
MSH3-203ENST00000512531 NINLQ9Y2I6 1382 aa12.54□□□□□ -0.4
MSH3-203ENST00000512531 USP6P35125 1406 aa12.54□□□□□ -0.4
MSH3-203ENST00000512531 KCNQ2O43526 872 aa12.53□□□□□ -0.4
MSH3-203ENST00000512531 WDR43Q15061 677 aaKnown RBP eCLIP12.53□□□□□ -0.4
MSH3-203ENST00000512531 PEAK1Q9H792 1746 aa12.52□□□□□ -0.41
MSH3-203ENST00000512531 ZMYND10O75800 440 aa12.52□□□□□ -0.41
MSH3-203ENST00000512531 CC2D1BQ5T0F9 858 aaKnown RBP12.52□□□□□ -0.41
MSH3-203ENST00000512531 CRISPLD2Q9H0B8 497 aa12.52□□□□□ -0.41
MSH3-203ENST00000512531 NEUROD2Q15784 382 aa12.51□□□□□ -0.41
MSH3-203ENST00000512531 DDB1Q16531 1140 aa12.51□□□□□ -0.41
MSH3-203ENST00000512531 ERICH6Q7L0X2 663 aa12.51□□□□□ -0.41
MSH3-203ENST00000512531 LARP6Q9BRS8 491 aaKnown RBP12.51□□□□□ -0.41
MSH3-203ENST00000512531 PPP4R2Q9NY27 417 aa12.51□□□□□ -0.41
MSH3-203ENST00000512531 WDR17Q8IZU2 1322 aa12.51□□□□□ -0.41
MSH3-203ENST00000512531 NGEFQ8N5V2 710 aa12.5□□□□□ -0.41
MSH3-203ENST00000512531 KCNH5Q8NCM2 988 aa12.5□□□□□ -0.41
MSH3-203ENST00000512531 CABP1Q9NZU7 370 aa12.5□□□□□ -0.41
MSH3-203ENST00000512531 EVC2Q86UK5 1308 aa12.5□□□□□ -0.41
MSH3-203ENST00000512531 COL18A1P39060 1754 aa12.49□□□□□ -0.41
MSH3-203ENST00000512531 TTC21AQ8NDW8 1320 aa12.49□□□□□ -0.41
MSH3-203ENST00000512531 ARXQ96QS3 562 aa12.49□□□□□ -0.41
MSH3-203ENST00000512531 SBF2Q86WG5 1849 aa12.48□□□□□ -0.41
MSH3-203ENST00000512531 ABCC6O95255 1503 aa12.48□□□□□ -0.41
MSH3-203ENST00000512531 YY1P25490 414 aa12.48□□□□□ -0.41
MSH3-203ENST00000512531 TOM1L2Q6ZVM7 507 aa12.48□□□□□ -0.41
MSH3-203ENST00000512531 ARHGEF25Q86VW2 580 aa12.48□□□□□ -0.41
MSH3-203ENST00000512531 CARD10Q9BWT7 1032 aa12.48□□□□□ -0.41
MSH3-203ENST00000512531 PPP1R1BQ9UD71 204 aaPredicted RBP12.48□□□□□ -0.41
MSH3-203ENST00000512531 QRICH2Q9H0J4 1663 aa12.48□□□□□ -0.41
MSH3-203ENST00000512531 LRRC37A3O60309 1634 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms